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Protein

50S ribosomal protein L29

Gene

rpmC

Organism
Escherichia coli O157:H7
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.By similarity

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciECOL386585:GJFA-4145-MONOMER.
ECOO157:RPMC-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L29
Gene namesi
Name:rpmC
Ordered Locus Names:Z4683, ECs4177
OrganismiEscherichia coli O157:H7
Taxonomic identifieri83334 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000558 Componenti: Chromosome UP000002519 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 636350S ribosomal protein L29PRO_0000130386Add
BLAST

Proteomic databases

PRIDEiP0A7M8.

Interactioni

Protein-protein interaction databases

STRINGi155864.Z4683.

Structurei

3D structure databases

ProteinModelPortaliP0A7M8.
SMRiP0A7M8. Positions 1-63.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L29P family.Curated

Phylogenomic databases

eggNOGiCOG0255.
HOGENOMiHOG000248754.
KOiK02904.
OMAiMRMQAST.
OrthoDBiEOG6VTK8Z.

Family and domain databases

Gene3Di1.10.287.310. 1 hit.
HAMAPiMF_00374. Ribosomal_L29.
InterProiIPR001854. Ribosomal_L29.
IPR018254. Ribosomal_L29_CS.
[Graphical view]
PfamiPF00831. Ribosomal_L29. 1 hit.
[Graphical view]
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.
PROSITEiPS00579. RIBOSOMAL_L29. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0A7M8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAKELREKS VEELNTELLN LLREQFNLRM QAASGQLQQS HLLKQVRRDV
60
ARVKTLLNEK AGA
Length:63
Mass (Da):7,273
Last modified:March 31, 1988 - v1
Checksum:iDAEF8F126B0AA077
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005174 Genomic DNA. Translation: AAG58433.1.
BA000007 Genomic DNA. Translation: BAB37600.1.
PIRiA91151.
E85996.
RefSeqiNP_289873.1. NC_002655.2.
NP_312204.1. NC_002695.1.

Genome annotation databases

EnsemblBacteriaiAAG58433; AAG58433; Z4683.
BAB37600; BAB37600; BAB37600.
GeneIDi915971.
961497.
KEGGiece:Z4683.
ecs:ECs4177.
PATRICi18357902. VBIEscCol44059_4118.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005174 Genomic DNA. Translation: AAG58433.1.
BA000007 Genomic DNA. Translation: BAB37600.1.
PIRiA91151.
E85996.
RefSeqiNP_289873.1. NC_002655.2.
NP_312204.1. NC_002695.1.

3D structure databases

ProteinModelPortaliP0A7M8.
SMRiP0A7M8. Positions 1-63.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi155864.Z4683.

Proteomic databases

PRIDEiP0A7M8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG58433; AAG58433; Z4683.
BAB37600; BAB37600; BAB37600.
GeneIDi915971.
961497.
KEGGiece:Z4683.
ecs:ECs4177.
PATRICi18357902. VBIEscCol44059_4118.

Phylogenomic databases

eggNOGiCOG0255.
HOGENOMiHOG000248754.
KOiK02904.
OMAiMRMQAST.
OrthoDBiEOG6VTK8Z.

Enzyme and pathway databases

BioCyciECOL386585:GJFA-4145-MONOMER.
ECOO157:RPMC-MONOMER.

Family and domain databases

Gene3Di1.10.287.310. 1 hit.
HAMAPiMF_00374. Ribosomal_L29.
InterProiIPR001854. Ribosomal_L29.
IPR018254. Ribosomal_L29_CS.
[Graphical view]
PfamiPF00831. Ribosomal_L29. 1 hit.
[Graphical view]
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.
PROSITEiPS00579. RIBOSOMAL_L29. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: O157:H7 / EDL933 / ATCC 700927 / EHEC.
  2. "Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12."
    Hayashi T., Makino K., Ohnishi M., Kurokawa K., Ishii K., Yokoyama K., Han C.-G., Ohtsubo E., Nakayama K., Murata T., Tanaka M., Tobe T., Iida T., Takami H., Honda T., Sasakawa C., Ogasawara N., Yasunaga T.
    , Kuhara S., Shiba T., Hattori M., Shinagawa H.
    DNA Res. 8:11-22(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: O157:H7 / Sakai / RIMD 0509952 / EHEC.

Entry informationi

Entry nameiRL29_ECO57
AccessioniPrimary (citable) accession number: P0A7M8
Secondary accession number(s): P02429
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 20, 1986
Last sequence update: March 31, 1988
Last modified: February 3, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.