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Protein

50S ribosomal protein L29

Gene

rpmC

Organism
Escherichia coli O157:H7
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L29
Gene namesi
Name:rpmC
Ordered Locus Names:Z4683, ECs4177
OrganismiEscherichia coli O157:H7
Taxonomic identifieri83334 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000558 Componenti: Chromosome
  • UP000002519 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001303861 – 6350S ribosomal protein L29Add BLAST63

Proteomic databases

PRIDEiP0A7M8.

Interactioni

Protein-protein interaction databases

STRINGi155864.Z4683.

Structurei

3D structure databases

ProteinModelPortaliP0A7M8.
SMRiP0A7M8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG41083MP. Bacteria.
COG0255. LUCA.
HOGENOMiHOG000248754.
KOiK02904.

Family and domain databases

CDDicd00427. Ribosomal_L29_HIP. 1 hit.
HAMAPiMF_00374. Ribosomal_L29. 1 hit.
InterProiView protein in InterPro
IPR001854. Ribosomal_L29/L35.
IPR018254. Ribosomal_L29_CS.
PfamiView protein in Pfam
PF00831. Ribosomal_L29. 1 hit.
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.
PROSITEiView protein in PROSITE
PS00579. RIBOSOMAL_L29. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A7M8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAKELREKS VEELNTELLN LLREQFNLRM QAASGQLQQS HLLKQVRRDV
60
ARVKTLLNEK AGA
Length:63
Mass (Da):7,273
Last modified:April 1, 1988 - v1
Checksum:iDAEF8F126B0AA077
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005174 Genomic DNA. Translation: AAG58433.1.
BA000007 Genomic DNA. Translation: BAB37600.1.
PIRiA91151.
E85996.
RefSeqiNP_312204.1. NC_002695.1.
WP_000644741.1. NZ_MKIV01000001.1.

Genome annotation databases

EnsemblBacteriaiAAG58433; AAG58433; Z4683.
BAB37600; BAB37600; BAB37600.
GeneIDi915971.
KEGGiece:Z4683.
ecs:ECs4177.
PATRICifig|386585.9.peg.4360.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005174 Genomic DNA. Translation: AAG58433.1.
BA000007 Genomic DNA. Translation: BAB37600.1.
PIRiA91151.
E85996.
RefSeqiNP_312204.1. NC_002695.1.
WP_000644741.1. NZ_MKIV01000001.1.

3D structure databases

ProteinModelPortaliP0A7M8.
SMRiP0A7M8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi155864.Z4683.

Proteomic databases

PRIDEiP0A7M8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG58433; AAG58433; Z4683.
BAB37600; BAB37600; BAB37600.
GeneIDi915971.
KEGGiece:Z4683.
ecs:ECs4177.
PATRICifig|386585.9.peg.4360.

Phylogenomic databases

eggNOGiENOG41083MP. Bacteria.
COG0255. LUCA.
HOGENOMiHOG000248754.
KOiK02904.

Family and domain databases

CDDicd00427. Ribosomal_L29_HIP. 1 hit.
HAMAPiMF_00374. Ribosomal_L29. 1 hit.
InterProiView protein in InterPro
IPR001854. Ribosomal_L29/L35.
IPR018254. Ribosomal_L29_CS.
PfamiView protein in Pfam
PF00831. Ribosomal_L29. 1 hit.
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.
PROSITEiView protein in PROSITE
PS00579. RIBOSOMAL_L29. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRL29_ECO57
AccessioniPrimary (citable) accession number: P0A7M8
Secondary accession number(s): P02429
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: April 1, 1988
Last modified: June 7, 2017
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.