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P0A654 (Y3716_MYCTU) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
UPF0133 protein Rv3716c/MT3819
Gene names
Ordered Locus Names:Rv3716c, MT3819
ORF Names:MTV025.064c
OrganismMycobacterium tuberculosis
Taxonomic identifier1773 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex

Protein attributes

Sequence length133 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Subunit structure

Homodimer By similarity. HAMAP MF_00274

Sequence similarities

Belongs to the UPF0133 family.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentplasma membrane

Inferred from direct assay. Source: MTBBASE

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 133133UPF0133 protein Rv3716c/MT3819 HAMAP MF_00274
PRO_0000170412

Sequences

Sequence LengthMass (Da)Tools
P0A654 [UniParc].

Last modified March 15, 2005. Version 1.
Checksum: 9D689EE3170AE782

FASTA13313,357
        10         20         30         40         50         60 
MQPGGDMSAL LAQAQQMQQK LLEAQQQLAN SEVHGQAGGG LVKVVVKGSG EVIGVTIDPK 

        70         80         90        100        110        120 
VVDPDDIETL QDLIVGAMRD ASQQVTKMAQ ERLGALAGAM RPPAPPAAPP GAPGMPGMPG 

       130 
MPGAPGAPPV PGI 

« Hide

References

« Hide 'large scale' references
[1]"Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence."
Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.M., Harris D.E., Gordon S.V., Eiglmeier K., Gas S., Barry C.E. III, Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T., Connor R., Davies R.M., Devlin K. expand/collapse author list , Feltwell T., Gentles S., Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J., Moule S., Murphy L.D., Oliver S., Osborne J., Quail M.A., Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton S., Squares S., Squares R., Sulston J.E., Taylor K., Whitehead S., Barrell B.G.
Nature 393:537-544(1998) [PubMed: 9634230] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25618 / H37Rv.
[2]"Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains."
Fleischmann R.D., Alland D., Eisen J.A., Carpenter L., White O., Peterson J.D., DeBoy R.T., Dodson R.J., Gwinn M.L., Haft D.H., Hickey E.K., Kolonay J.F., Nelson W.C., Umayam L.A., Ermolaeva M.D., Salzberg S.L., Delcher A., Utterback T.R. expand/collapse author list , Weidman J.F., Khouri H.M., Gill J., Mikula A., Bishai W., Jacobs W.R. Jr., Venter J.C., Fraser C.M.
J. Bacteriol. 184:5479-5490(2002) [PubMed: 12218036] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CDC 1551 / Oshkosh.
[3]"Identification of acidic, low molecular mass proteins of Mycobacterium tuberculosis strain H37Rv by matrix-assisted laser desorption/ionization and electrospray ionization mass spectrometry."
Mattow J., Jungblut P.R., Mueller E.-C., Kaufmann S.H.E.
Proteomics 1:494-507(2001) [PubMed: 11681203] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY.
Strain: ATCC 25618 / H37Rv.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX842583 Genomic DNA. Translation: CAA18038.1.
AE000516 Genomic DNA. Translation: AAK48188.1.
PIRE70795.
RefSeqNP_218233.1. NC_000962.2.
NP_338374.1. NC_002755.2.

3D structure databases

ProteinModelPortalP0A654.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBMYCT00000003786; EBMYCP00000003786; EBMYCG00000003784.
EBMYCT00000070618; EBMYCP00000068677; EBMYCG00000070613.
GeneID885595.
922679.
GenomeReviewsGene locus MT3819 in contig AE000516_GR.
Gene locus Rv3716c in contig AL123456_GR.
KEGGmtc:MT3819.
mtu:Rv3716c.
PATRIC18130158. VBIMycTub22151_4171.
TIGRMT3819.

Organism-specific databases

TubercuListRv3716c.

Phylogenomic databases

GeneTreeEBGT00050000015096.
HOGENOMHBG734215.
OMAMADFLGM.
PhylomeDBP0A654.
ProtClustDBPRK00153.

Family and domain databases

HAMAPMF_00274. UPF0133.
[Tree]
InterProIPR004401. UPF0133.
[Graphical view]
Gene3DG3DSA:3.30.1310.10. CHP103. 1 hit.
KOK09747.
PfamPF02575. DUF149. 1 hit.
[Graphical view]
PIRSFPIRSF004555. UCP004555. 1 hit.
SUPFAMSSF82607. CHP00103. 1 hit.
TIGRFAMsTIGR00103. DNA_YbaB_EbfC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY3716_MYCTU
AccessionPrimary (citable) accession number: P0A654
Secondary accession number(s): O69683
Entry history
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: March 15, 2005
Last modified: January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families