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Protein

Immunogenic membrane protein YajC

Gene

yajC

Organism
Brucella suis biovar 1 (strain 1330)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Not known; elicits an immunogenic response in mice.

Names & Taxonomyi

Protein namesi
Recommended name:
Immunogenic membrane protein YajC
Gene namesi
Name:yajC
Ordered Locus Names:BR0890, BS1330_I0886
OrganismiBrucella suis biovar 1 (strain 1330)
Taxonomic identifieri204722 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000007104 Componenti: Chromosome I UP000000824 Componenti: Chromosome I

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei18 – 3821HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 113113Immunogenic membrane protein YajCPRO_0000097025Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi204722.BR0890.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0092 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1862.
HOGENOMiHOG000018859.
KOiK03210.
OMAiGGDANSM.
OrthoDBiEOG6QP14M.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A4Q2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFVTPAFAQA SGSVVGPDML MSILPFILIF VIMYFLIIRP QRTQMKKRQE
60 70 80 90 100
MLNSVRRGDT VVTGGGIVGK VLKVVDDNEL ELEIADGVRI RVVRATLMDV
110
RVKGEPVADN KNK
Length:113
Mass (Da):12,560
Last modified:March 15, 2005 - v1
Checksum:i9B1C0FB65DA9E2D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN29818.1.
CP002997 Genomic DNA. Translation: AEM18235.1.
RefSeqiNP_697903.1. NC_004310.3.
YP_005615727.1. NC_017251.1.

Genome annotation databases

EnsemblBacteriaiAAN29818; AAN29818; BR0890.
AEM18235; AEM18235; BS1330_I0886.
KEGGibms:BR0890.
bsi:BS1330_I0886.
PATRICi17790084. VBIBruSui107850_0903.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN29818.1.
CP002997 Genomic DNA. Translation: AEM18235.1.
RefSeqiNP_697903.1. NC_004310.3.
YP_005615727.1. NC_017251.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi204722.BR0890.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN29818; AAN29818; BR0890.
AEM18235; AEM18235; BS1330_I0886.
KEGGibms:BR0890.
bsi:BS1330_I0886.
PATRICi17790084. VBIBruSui107850_0903.

Phylogenomic databases

eggNOGiCOG1862.
HOGENOMiHOG000018859.
KOiK03210.
OMAiGGDANSM.
OrthoDBiEOG6QP14M.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.

Entry informationi

Entry nameiYAJC_BRUSU
AccessioniPrimary (citable) accession number: P0A4Q2
Secondary accession number(s): G0K9B8, Q9ZG87
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: March 15, 2005
Last modified: April 1, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella suis
    Brucella suis (strain 1330): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.