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Protein

Immunogenic membrane protein YajC

Gene

yajC

Organism
Brucella suis biovar 1 (strain 1330)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Not known; elicits an immunogenic response in mice.

Names & Taxonomyi

Protein namesi
Recommended name:
Immunogenic membrane protein YajC
Gene namesi
Name:yajC
Ordered Locus Names:BR0890, BS1330_I0886
OrganismiBrucella suis biovar 1 (strain 1330)
Taxonomic identifieri204722 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
Proteomesi
  • UP000007104 Componenti: Chromosome I

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei18 – 3821HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 113113Immunogenic membrane protein YajCPRO_0000097025Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP0A4Q2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0092 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000018859.
KOiK03210.
OMAiFFISSAW.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
SMARTiSM01323. YajC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00739. yajC. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A4Q2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFVTPAFAQA SGSVVGPDML MSILPFILIF VIMYFLIIRP QRTQMKKRQE
60 70 80 90 100
MLNSVRRGDT VVTGGGIVGK VLKVVDDNEL ELEIADGVRI RVVRATLMDV
110
RVKGEPVADN KNK
Length:113
Mass (Da):12,560
Last modified:March 15, 2005 - v1
Checksum:i9B1C0FB65DA9E2D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN29818.1.
CP002997 Genomic DNA. Translation: AEM18235.1.
RefSeqiWP_002964021.1. NZ_KN046804.1.

Genome annotation databases

EnsemblBacteriaiAAN29818; AAN29818; BR0890.
AEM18235; AEM18235; BS1330_I0886.
GeneIDi3787581.
KEGGibms:BR0890.
bsi:BS1330_I0886.
PATRICi17790084. VBIBruSui107850_0903.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN29818.1.
CP002997 Genomic DNA. Translation: AEM18235.1.
RefSeqiWP_002964021.1. NZ_KN046804.1.

3D structure databases

ProteinModelPortaliP0A4Q2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN29818; AAN29818; BR0890.
AEM18235; AEM18235; BS1330_I0886.
GeneIDi3787581.
KEGGibms:BR0890.
bsi:BS1330_I0886.
PATRICi17790084. VBIBruSui107850_0903.

Phylogenomic databases

HOGENOMiHOG000018859.
KOiK03210.
OMAiFFISSAW.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
SMARTiSM01323. YajC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00739. yajC. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYAJC_BRUSU
AccessioniPrimary (citable) accession number: P0A4Q2
Secondary accession number(s): G0K9B8, Q9ZG87
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: March 15, 2005
Last modified: September 7, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella suis
    Brucella suis (strain 1330): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.