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P0A3L2

- IF3_LISIN

UniProt

P0A3L2 - IF3_LISIN

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Protein

Translation initiation factor IF-3

Gene
infC, lin1897
Organism
Listeria innocua serovar 6a (strain CLIP 11262)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins By similarity.UniRule annotation

GO - Molecular functioni

  1. translation initiation factor activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Initiation factor

Keywords - Biological processi

Protein biosynthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Translation initiation factor IF-3
Gene namesi
Name:infC
Ordered Locus Names:lin1897
OrganismiListeria innocua serovar 6a (strain CLIP 11262)
Taxonomic identifieri272626 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
ProteomesiUP000002513: Chromosome

Organism-specific databases

GenoListiLIN1897.

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 171171Translation initiation factor IF-3UniRule annotationPRO_0000177536Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi272626.lin1897.

Structurei

3D structure databases

ProteinModelPortaliP0A3L2.
SMRiP0A3L2. Positions 3-78, 83-167.

Family & Domainsi

Sequence similaritiesi

Belongs to the IF-3 family.

Phylogenomic databases

eggNOGiCOG0290.
HOGENOMiHOG000035157.
KOiK02520.
OMAiPRYNEFI.
OrthoDBiEOG63JRGJ.

Family and domain databases

Gene3Di3.10.20.80. 1 hit.
3.30.110.10. 1 hit.
HAMAPiMF_00080. IF_3.
InterProiIPR019813. Translation_initiation_fac3_CS.
IPR001288. Translation_initiation_fac_3.
IPR019815. Translation_initiation_fac_3_C.
IPR019814. Translation_initiation_fac_3_N.
[Graphical view]
PANTHERiPTHR10938. PTHR10938. 1 hit.
PfamiPF00707. IF3_C. 1 hit.
PF05198. IF3_N. 1 hit.
[Graphical view]
SUPFAMiSSF54364. SSF54364. 1 hit.
SSF55200. SSF55200. 1 hit.
TIGRFAMsiTIGR00168. infC. 1 hit.
PROSITEiPS00938. IF3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0A3L2-1 [UniParc]FASTAAdd to Basket

« Hide

MSKDMLVNDG IRAREVRLID QDGEQLGVKS KIDALQIAEK ANLDLVLVAP    50
TAKPPVARIM DYGKFRFEQQ KKDKEARKNQ KVIVMKEVRL SPTIDEHDFD 100
TKLRNARKFL EKGDKVKCSI RFKGRAITHK EIGQKVLDRF AKACEDLCTI 150
EQRPKMDGRS MFLVLAPLHE K 171
Length:171
Mass (Da):19,647
Last modified:March 15, 2005 - v1
Checksum:i66638EA70DFF48A3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL596170 Genomic DNA. Translation: CAC97127.1.
AJ249401 Genomic DNA. Translation: CAC19093.1.
PIRiAG1669.
RefSeqiNP_471231.1. NC_003212.1.

Genome annotation databases

EnsemblBacteriaiCAC97127; CAC97127; CAC97127.
GeneIDi1130585.
KEGGilin:lin1897.
PATRICi20300605. VBILisInn102668_1941.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL596170 Genomic DNA. Translation: CAC97127.1 .
AJ249401 Genomic DNA. Translation: CAC19093.1 .
PIRi AG1669.
RefSeqi NP_471231.1. NC_003212.1.

3D structure databases

ProteinModelPortali P0A3L2.
SMRi P0A3L2. Positions 3-78, 83-167.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272626.lin1897.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAC97127 ; CAC97127 ; CAC97127 .
GeneIDi 1130585.
KEGGi lin:lin1897.
PATRICi 20300605. VBILisInn102668_1941.

Organism-specific databases

GenoListi LIN1897.

Phylogenomic databases

eggNOGi COG0290.
HOGENOMi HOG000035157.
KOi K02520.
OMAi PRYNEFI.
OrthoDBi EOG63JRGJ.

Family and domain databases

Gene3Di 3.10.20.80. 1 hit.
3.30.110.10. 1 hit.
HAMAPi MF_00080. IF_3.
InterProi IPR019813. Translation_initiation_fac3_CS.
IPR001288. Translation_initiation_fac_3.
IPR019815. Translation_initiation_fac_3_C.
IPR019814. Translation_initiation_fac_3_N.
[Graphical view ]
PANTHERi PTHR10938. PTHR10938. 1 hit.
Pfami PF00707. IF3_C. 1 hit.
PF05198. IF3_N. 1 hit.
[Graphical view ]
SUPFAMi SSF54364. SSF54364. 1 hit.
SSF55200. SSF55200. 1 hit.
TIGRFAMsi TIGR00168. infC. 1 hit.
PROSITEi PS00938. IF3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CLIP 11262.
  2. "The evolution of virulence determinants in Listeria genus."
    Ng E.Y., Goebel W.
    Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-139.
    Strain: Serovar 6b.

Entry informationi

Entry nameiIF3_LISIN
AccessioniPrimary (citable) accession number: P0A3L2
Secondary accession number(s): O53084, Q9EUW3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: March 15, 2005
Last modified: May 14, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Translation initiation factors
    List of translation initiation factor entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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