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P0A3L2

- IF3_LISIN

UniProt

P0A3L2 - IF3_LISIN

Protein

Translation initiation factor IF-3

Gene

infC

Organism
Listeria innocua serovar 6a (strain CLIP 11262)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (15 Mar 2005)
      Previous versions | rss
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    Functioni

    IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.UniRule annotation

    GO - Molecular functioni

    1. translation initiation factor activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Initiation factor

    Keywords - Biological processi

    Protein biosynthesis

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Translation initiation factor IF-3UniRule annotation
    Gene namesi
    Name:infCUniRule annotation
    Ordered Locus Names:lin1897
    OrganismiListeria innocua serovar 6a (strain CLIP 11262)
    Taxonomic identifieri272626 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
    ProteomesiUP000002513: Chromosome

    Organism-specific databases

    GenoListiLIN1897.

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 171171Translation initiation factor IF-3PRO_0000177536Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi272626.lin1897.

    Structurei

    3D structure databases

    ProteinModelPortaliP0A3L2.
    SMRiP0A3L2. Positions 3-78, 83-167.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the IF-3 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0290.
    HOGENOMiHOG000035157.
    KOiK02520.
    OMAiPRYNEFI.
    OrthoDBiEOG63JRGJ.

    Family and domain databases

    Gene3Di3.10.20.80. 1 hit.
    3.30.110.10. 1 hit.
    HAMAPiMF_00080. IF_3.
    InterProiIPR019813. Translation_initiation_fac3_CS.
    IPR001288. Translation_initiation_fac_3.
    IPR019815. Translation_initiation_fac_3_C.
    IPR019814. Translation_initiation_fac_3_N.
    [Graphical view]
    PANTHERiPTHR10938. PTHR10938. 1 hit.
    PfamiPF00707. IF3_C. 1 hit.
    PF05198. IF3_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF54364. SSF54364. 1 hit.
    SSF55200. SSF55200. 1 hit.
    TIGRFAMsiTIGR00168. infC. 1 hit.
    PROSITEiPS00938. IF3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P0A3L2-1 [UniParc]FASTAAdd to Basket

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    MSKDMLVNDG IRAREVRLID QDGEQLGVKS KIDALQIAEK ANLDLVLVAP    50
    TAKPPVARIM DYGKFRFEQQ KKDKEARKNQ KVIVMKEVRL SPTIDEHDFD 100
    TKLRNARKFL EKGDKVKCSI RFKGRAITHK EIGQKVLDRF AKACEDLCTI 150
    EQRPKMDGRS MFLVLAPLHE K 171
    Length:171
    Mass (Da):19,647
    Last modified:March 15, 2005 - v1
    Checksum:i66638EA70DFF48A3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL596170 Genomic DNA. Translation: CAC97127.1.
    AJ249401 Genomic DNA. Translation: CAC19093.1.
    PIRiAG1669.
    RefSeqiNP_471231.1. NC_003212.1.

    Genome annotation databases

    EnsemblBacteriaiCAC97127; CAC97127; CAC97127.
    GeneIDi1130585.
    KEGGilin:lin1897.
    PATRICi20300605. VBILisInn102668_1941.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL596170 Genomic DNA. Translation: CAC97127.1 .
    AJ249401 Genomic DNA. Translation: CAC19093.1 .
    PIRi AG1669.
    RefSeqi NP_471231.1. NC_003212.1.

    3D structure databases

    ProteinModelPortali P0A3L2.
    SMRi P0A3L2. Positions 3-78, 83-167.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272626.lin1897.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAC97127 ; CAC97127 ; CAC97127 .
    GeneIDi 1130585.
    KEGGi lin:lin1897.
    PATRICi 20300605. VBILisInn102668_1941.

    Organism-specific databases

    GenoListi LIN1897.

    Phylogenomic databases

    eggNOGi COG0290.
    HOGENOMi HOG000035157.
    KOi K02520.
    OMAi PRYNEFI.
    OrthoDBi EOG63JRGJ.

    Family and domain databases

    Gene3Di 3.10.20.80. 1 hit.
    3.30.110.10. 1 hit.
    HAMAPi MF_00080. IF_3.
    InterProi IPR019813. Translation_initiation_fac3_CS.
    IPR001288. Translation_initiation_fac_3.
    IPR019815. Translation_initiation_fac_3_C.
    IPR019814. Translation_initiation_fac_3_N.
    [Graphical view ]
    PANTHERi PTHR10938. PTHR10938. 1 hit.
    Pfami PF00707. IF3_C. 1 hit.
    PF05198. IF3_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54364. SSF54364. 1 hit.
    SSF55200. SSF55200. 1 hit.
    TIGRFAMsi TIGR00168. infC. 1 hit.
    PROSITEi PS00938. IF3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CLIP 11262.
    2. "The evolution of virulence determinants in Listeria genus."
      Ng E.Y., Goebel W.
      Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-139.
      Strain: Serovar 6b.

    Entry informationi

    Entry nameiIF3_LISIN
    AccessioniPrimary (citable) accession number: P0A3L2
    Secondary accession number(s): O53084, Q9EUW3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 15, 2005
    Last sequence update: March 15, 2005
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Translation initiation factors
      List of translation initiation factor entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3