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Protein

Glycogen synthase 1

Gene

glgA1

Organism
Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.By similarity

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).

Pathwayi: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei15ADP-glucoseBy similarity1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 1 (EC:2.4.1.21)
Alternative name(s):
Starch [bacterial glycogen] synthase 1
Gene namesi
Name:glgA1
Synonyms:glgA
OrganismiRhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
Taxonomic identifieri358 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001885861 – 480Glycogen synthase 1Add BLAST480

Proteomic databases

PRIDEiP0A3F3.

Interactioni

Protein-protein interaction databases

STRINGi1050720.Agau_L100943.

Structurei

Secondary structure

1480
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi2 – 6Combined sources5
Turni11 – 13Combined sources3
Helixi18 – 31Combined sources14
Turni32 – 34Combined sources3
Beta strandi36 – 42Combined sources7
Helixi45 – 50Combined sources6
Beta strandi55 – 61Combined sources7
Beta strandi63 – 65Combined sources3
Beta strandi68 – 75Combined sources8
Beta strandi78 – 84Combined sources7
Helixi86 – 89Combined sources4
Beta strandi91 – 93Combined sources3
Beta strandi95 – 97Combined sources3
Beta strandi101 – 103Combined sources3
Helixi107 – 122Combined sources16
Beta strandi126 – 128Combined sources3
Beta strandi132 – 137Combined sources6
Helixi138 – 141Combined sources4
Helixi144 – 150Combined sources7
Beta strandi151 – 153Combined sources3
Beta strandi158 – 163Combined sources6
Helixi173 – 178Combined sources6
Helixi183 – 185Combined sources3
Turni188 – 191Combined sources4
Beta strandi196 – 198Combined sources3
Helixi199 – 206Combined sources8
Beta strandi208 – 213Combined sources6
Helixi215 – 220Combined sources6
Helixi224 – 227Combined sources4
Helixi231 – 235Combined sources5
Helixi236 – 240Combined sources5
Beta strandi241 – 243Combined sources3
Turni250 – 252Combined sources3
Turni255 – 257Combined sources3
Beta strandi261 – 263Combined sources3
Helixi267 – 272Combined sources6
Helixi273 – 284Combined sources12
Beta strandi289 – 291Combined sources3
Beta strandi293 – 298Combined sources6
Turni302 – 305Combined sources4
Helixi306 – 310Combined sources5
Helixi313 – 318Combined sources6
Beta strandi322 – 327Combined sources6
Helixi331 – 343Combined sources13
Turni344 – 347Combined sources4
Beta strandi348 – 353Combined sources6
Helixi356 – 365Combined sources10
Beta strandi367 – 371Combined sources5
Helixi381 – 388Combined sources8
Beta strandi391 – 397Combined sources7
Helixi398 – 403Combined sources6
Helixi409 – 413Combined sources5
Beta strandi419 – 424Combined sources6
Helixi427 – 441Combined sources15
Helixi444 – 455Combined sources12
Helixi461 – 475Combined sources15

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1RZUX-ray2.30A/B1-480[»]
1RZVX-ray2.30A/B1-480[»]
ProteinModelPortaliP0A3F3.
SMRiP0A3F3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0A3F3.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105CXW. Bacteria.
COG0297. LUCA.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth. 1 hit.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A3F3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVLSVSSEI YPLIKTGGLA DVVGALPIAL EAHGVRTRTL IPGYPAVKAA
60 70 80 90 100
VTDPVKCFEF TDLLGEKADL LEVQHERLDL LILDAPAYYE RSGGPYLGQT
110 120 130 140 150
GKDYPDNWKR FAALSLAAAR IGAGVLPGWR PDMVHAHDWQ AAMTPVYMRY
160 170 180 190 200
AETPEIPSLL TIHNIAFQGQ FGANIFSKLA LPAHAFGMEG IEYYNDVSFL
210 220 230 240 250
KGGLQTATAL STVSPSYAEE ILTAEFGMGL EGVIGSRAHV LHGIVNGIDA
260 270 280 290 300
DVWNPATDHL IHDNYSAANL KNRALNKKAV AEHFRIDDDG SPLFCVISRL
310 320 330 340 350
TWQKGIDLMA EAVDEIVSLG GRLVVLGAGD VALEGALLAA ASRHHGRVGV
360 370 380 390 400
AIGYNEPLSH LMQAGCDAII IPSRFEPCGL TQLYALRYGC IPVVARTGGL
410 420 430 440 450
ADTVIDANHA ALASKAATGV QFSPVTLDGL KQAIRRTVRY YHDPKLWTQM
460 470 480
QKLGMKSDVS WEKSAGLYAA LYSQLISKGH
Length:480
Mass (Da):51,709
Last modified:March 15, 2005 - v1
Checksum:i771CF7F15FE92B83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF033856 Genomic DNA. Translation: AAD03474.1.
RefSeqiWP_010973546.1. NZ_JZLL01000074.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF033856 Genomic DNA. Translation: AAD03474.1.
RefSeqiWP_010973546.1. NZ_JZLL01000074.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1RZUX-ray2.30A/B1-480[»]
1RZVX-ray2.30A/B1-480[»]
ProteinModelPortaliP0A3F3.
SMRiP0A3F3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1050720.Agau_L100943.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Proteomic databases

PRIDEiP0A3F3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4105CXW. Bacteria.
COG0297. LUCA.

Enzyme and pathway databases

UniPathwayiUPA00164.

Miscellaneous databases

EvolutionaryTraceiP0A3F3.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth. 1 hit.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiGLGA1_RHIRD
AccessioniPrimary (citable) accession number: P0A3F3
Secondary accession number(s): P39670
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: March 15, 2005
Last modified: November 2, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.