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Protein

Glycogen synthase 1

Gene

glgA1

Organism
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.By similarity

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseBy similarity

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciAGRO:ATU4075-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 1 (EC:2.4.1.21)
Alternative name(s):
Starch [bacterial glycogen] synthase 1
Gene namesi
Name:glgA1
Synonyms:glgA
Ordered Locus Names:Atu4075
ORF Names:AGR_L_1562
OrganismiAgrobacterium tumefaciens (strain C58 / ATCC 33970)
Taxonomic identifieri176299 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex
ProteomesiUP000000813 Componenti: Chromosome linear

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 480480Glycogen synthase 1PRO_0000188584Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi176299.Atu4075.

Structurei

3D structure databases

ProteinModelPortaliP0A3F2.
SMRiP0A3F2. Positions 1-478.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiPAYDEAM.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A3F2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVLSVSSEI YPLIKTGGLA DVVGALPIAL EAHGVRTRTL IPGYPAVKAA
60 70 80 90 100
VTDPVKCFEF TDLLGEKADL LEVQHERLDL LILDAPAYYE RSGGPYLGQT
110 120 130 140 150
GKDYPDNWKR FAALSLAAAR IGAGVLPGWR PDMVHAHDWQ AAMTPVYMRY
160 170 180 190 200
AETPEIPSLL TIHNIAFQGQ FGANIFSKLA LPAHAFGMEG IEYYNDVSFL
210 220 230 240 250
KGGLQTATAL STVSPSYAEE ILTAEFGMGL EGVIGSRAHV LHGIVNGIDA
260 270 280 290 300
DVWNPATDHL IHDNYSAANL KNRALNKKAV AEHFRIDDDG SPLFCVISRL
310 320 330 340 350
TWQKGIDLMA EAVDEIVSLG GRLVVLGAGD VALEGALLAA ASRHHGRVGV
360 370 380 390 400
AIGYNEPLSH LMQAGCDAII IPSRFEPCGL TQLYALRYGC IPVVARTGGL
410 420 430 440 450
ADTVIDANHA ALASKAATGV QFSPVTLDGL KQAIRRTVRY YHDPKLWTQM
460 470 480
QKLGMKSDVS WEKSAGLYAA LYSQLISKGH
Length:480
Mass (Da):51,709
Last modified:March 15, 2005 - v1
Checksum:i771CF7F15FE92B83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007870 Genomic DNA. Translation: AAK89354.1.
PIRiAF3057.
H98228.
RefSeqiNP_356569.1. NC_003063.2.

Genome annotation databases

EnsemblBacteriaiAAK89354; AAK89354; Atu4075.
GeneIDi1135949.
KEGGiatu:Atu4075.
PATRICi20817580. VBIAgrTum91616_3892.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007870 Genomic DNA. Translation: AAK89354.1.
PIRiAF3057.
H98228.
RefSeqiNP_356569.1. NC_003063.2.

3D structure databases

ProteinModelPortaliP0A3F2.
SMRiP0A3F2. Positions 1-478.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi176299.Atu4075.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

DNASUi1135949.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK89354; AAK89354; Atu4075.
GeneIDi1135949.
KEGGiatu:Atu4075.
PATRICi20817580. VBIAgrTum91616_3892.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiPAYDEAM.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciAGRO:ATU4075-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C58 / ATCC 33970.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C58 / ATCC 33970.

Entry informationi

Entry nameiGLGA1_AGRT5
AccessioniPrimary (citable) accession number: P0A3F2
Secondary accession number(s): P39670
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: March 15, 2005
Last modified: January 7, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.