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P0A329 (CCMK_SYNPX) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Carbon dioxide-concentrating mechanism protein CcmK
Alternative name(s):
Carboxysome shell protein CsoS1
Gene names
Name:ccmK
Synonyms:csoS1
Ordered Locus Names:SYNW1719
OrganismSynechococcus sp. (strain WH8102) [Complete proteome] [HAMAP]
Taxonomic identifier84588 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length103 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.

Sequence similarities

Belongs to the bacterial microcompartments protein family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 103103Carbon dioxide-concentrating mechanism protein CcmK
PRO_0000201504

Sequences

Sequence LengthMass (Da)Tools
P0A329 [UniParc].

Last modified March 15, 2005. Version 1.
Checksum: BFBF578AB15734E8

FASTA10310,584
        10         20         30         40         50         60 
MANETMGIAL GMIETRGLVP AIEAADAMTK AAEVRLIGRE FVGGGYVTVL VRGETGAVNA 

        70         80         90        100 
AVRAGADACE RVGDGLVAAH IIARPHREVE PALGNGNFLG QKD 

« Hide

References

[1]"The genome of a motile marine Synechococcus."
Palenik B., Brahamsha B., Larimer F.W., Land M.L., Hauser L., Chain P., Lamerdin J.E., Regala W., Allen E.E., McCarren J., Paulsen I.T., Dufresne A., Partensky F., Webb E.A., Waterbury J.
Nature 424:1037-1042(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WH8102.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX569693 Genomic DNA. Translation: CAE08234.1.
RefSeqNP_897810.1. NC_005070.1.

3D structure databases

ProteinModelPortalP0A329.
SMRP0A329. Positions 7-93.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING84588.SYNW1719.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE08234; CAE08234; SYNW1719.
GeneID1730067.
KEGGsyw:SYNW1719.
PATRIC23835113. VBISynSp27240_1851.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4577.
HOGENOMHOG000286836.
OMAHMEVESI.
OrthoDBEOG6ZH2H4.

Family and domain databases

InterProIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamPF00936. BMC. 1 hit.
[Graphical view]
SMARTSM00877. BMC. 1 hit.
[Graphical view]
PROSITEPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCCMK_SYNPX
AccessionPrimary (citable) accession number: P0A329
Secondary accession number(s): P96485
Entry history
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: March 15, 2005
Last modified: May 14, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families