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Protein

Propanediol utilization protein PduU

Gene

pduU

Organism
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Propanediol utilization protein PduU
Gene namesi
Name:pduU
Ordered Locus Names:STM2055
OrganismiSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Taxonomic identifieri99287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000001014 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002015261 – 116Propanediol utilization protein PduUAdd BLAST116

Proteomic databases

PaxDbiP0A1D1.
PRIDEiP0A1D1.

Expressioni

Inductioni

By propanediol.

Interactioni

Protein-protein interaction databases

STRINGi99287.STM2055.

Structurei

Secondary structure

1116
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi9 – 14Combined sources6
Beta strandi19 – 28Combined sources10
Helixi31 – 36Combined sources6
Beta strandi45 – 53Combined sources9
Helixi56 – 66Combined sources11
Beta strandi67 – 76Combined sources10
Turni77 – 80Combined sources4
Beta strandi81 – 86Combined sources6
Helixi88 – 106Combined sources19
Beta strandi114 – 116Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3CGIX-ray1.80A/B/C/D1-116[»]
SMRiP0A1D1.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0A1D1.

Family & Domainsi

Sequence similaritiesi

Belongs to the EutS/PduU family.Curated

Phylogenomic databases

eggNOGiENOG4105M3W. Bacteria.
COG4810. LUCA.
HOGENOMiHOG000286280.
KOiK04031.
OMAiHVIASPI.
PhylomeDBiP0A1D1.

Family and domain databases

CDDicd07046. BMC_PduU-EutS. 1 hit.
InterProiIPR009307. EutS.
IPR000249. Microcompartment_bac.
[Graphical view]
PANTHERiPTHR40449. PTHR40449. 1 hit.
PfamiPF00936. BMC. 1 hit.
[Graphical view]
PIRSFiPIRSF012296. EutS_PduU. 1 hit.
SMARTiSM00877. BMC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0A1D1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERQPTTDRM IQEYVPGKQV TLAHLIANPG KDLFKKLGLQ DAVSAIGILT
60 70 80 90 100
ITPSEASIIA CDIATKSGAV EIGFLDRFTG AVVLTGDVSA VEYALKQVTR
110
TLGEMMQFTT CSITRT
Length:116
Mass (Da):12,476
Last modified:March 1, 2005 - v1
Checksum:i39BEFE5E38F0D1F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF026270 Genomic DNA. Translation: AAD39019.1.
AE006468 Genomic DNA. Translation: AAL20959.1.
RefSeqiNP_461000.1. NC_003197.1.
WP_000441103.1. NC_003197.1.

Genome annotation databases

EnsemblBacteriaiAAL20959; AAL20959; STM2055.
GeneIDi1253576.
KEGGistm:STM2055.
PATRICi32382693. VBISalEnt20916_2177.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF026270 Genomic DNA. Translation: AAD39019.1.
AE006468 Genomic DNA. Translation: AAL20959.1.
RefSeqiNP_461000.1. NC_003197.1.
WP_000441103.1. NC_003197.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3CGIX-ray1.80A/B/C/D1-116[»]
SMRiP0A1D1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi99287.STM2055.

Proteomic databases

PaxDbiP0A1D1.
PRIDEiP0A1D1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL20959; AAL20959; STM2055.
GeneIDi1253576.
KEGGistm:STM2055.
PATRICi32382693. VBISalEnt20916_2177.

Phylogenomic databases

eggNOGiENOG4105M3W. Bacteria.
COG4810. LUCA.
HOGENOMiHOG000286280.
KOiK04031.
OMAiHVIASPI.
PhylomeDBiP0A1D1.

Miscellaneous databases

EvolutionaryTraceiP0A1D1.

Family and domain databases

CDDicd07046. BMC_PduU-EutS. 1 hit.
InterProiIPR009307. EutS.
IPR000249. Microcompartment_bac.
[Graphical view]
PANTHERiPTHR40449. PTHR40449. 1 hit.
PfamiPF00936. BMC. 1 hit.
[Graphical view]
PIRSFiPIRSF012296. EutS_PduU. 1 hit.
SMARTiSM00877. BMC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPDUU_SALTY
AccessioniPrimary (citable) accession number: P0A1D1
Secondary accession number(s): Q9XDM7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 2005
Last sequence update: March 1, 2005
Last modified: November 2, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.