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P0A1C7 (PDUA_SALTY) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Propanediol utilization protein PduA
Gene names
Name:pduA
Ordered Locus Names:STM2038
OrganismSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) [Reference proteome] [HAMAP]
Taxonomic identifier99287 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella

Protein attributes

Sequence length94 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Induction

By propanediol.

Sequence similarities

Belongs to the bacterial microcompartments protein family.

Ontologies

Keywords
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 9494Propanediol utilization protein PduA
PRO_0000201511

Secondary structure

............. 94
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P0A1C7 [UniParc].

Last modified March 1, 2005. Version 1.
Checksum: 5EDC7C793F19DE1E

FASTA949,592
        10         20         30         40         50         60 
MQQEALGMVE TKGLTAAIEA ADAMVKSANV MLVGYEKIGS GLVTVIVRGD VGAVKAATDA 

        70         80         90 
GAAAARNVGE VKAVHVIPRP HTDVEKILPK GISQ 

« Hide

References

« Hide 'large scale' references
[1]"The control region of the pdu/cob regulon in Salmonella typhimurium."
Chen P., Anderson D.I., Roth J.R.
J. Bacteriol. 176:5474-5482(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: LT2.
[2]"Propanediol utilization genes (pdu) of Salmonella typhimurium: three genes for the propanediol dehydratase."
Bobik T.A., Xu Y., Jeter R.M., Otto K.E., Roth J.R.
J. Bacteriol. 179:6633-6639(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: LT2.
[3]"Complete genome sequence of Salmonella enterica serovar Typhimurium LT2."
McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P., Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D., Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E. expand/collapse author list , Ryan E., Sun H., Florea L., Miller W., Stoneking T., Nhan M., Waterston R., Wilson R.K.
Nature 413:852-856(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LT2 / SGSC1412 / ATCC 700720.
[4]"The propanediol utilization (pdu) operon of Salmonella enterica serovar typhimurium LT2 includes genes necessary for formation of polyhedral organelles involved in coenzyme B(12)-dependent 1, 2-propanediol degradation."
Bobik T.A., Havemann G.D., Busch R.J., Williams D.S., Aldrich H.C.
J. Bacteriol. 181:5967-5975(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], SEQUENCE REVISION TO C-TERMINUS.
Strain: LT2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF026270 Genomic DNA. Translation: AAB84107.2.
AE006468 Genomic DNA. Translation: AAL20942.1.
RefSeqNP_460983.1. NC_003197.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3NGKX-ray2.26A2-94[»]
ProteinModelPortalP0A1C7.
SMRP0A1C7. Positions 5-89.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING99287.STM2038.

Proteomic databases

PaxDbP0A1C7.
PRIDEP0A1C7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL20942; AAL20942; STM2038.
GeneID1253559.
KEGGstm:STM2038.
PATRIC32382659. VBISalEnt20916_2160.

Phylogenomic databases

eggNOGCOG4577.
HOGENOMHOG000286836.
OMACASARQI.
OrthoDBEOG6ZH2H4.
ProtClustDBCLSK894249.

Enzyme and pathway databases

BioCycSENT99287:GCTI-2050-MONOMER.

Family and domain databases

InterProIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamPF00936. BMC. 1 hit.
[Graphical view]
SMARTSM00877. BMC. 1 hit.
[Graphical view]
PROSITEPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePDUA_SALTY
AccessionPrimary (citable) accession number: P0A1C7
Secondary accession number(s): P37448
Entry history
Integrated into UniProtKB/Swiss-Prot: March 1, 2005
Last sequence update: March 1, 2005
Last modified: November 13, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references