##gff-version 3 P09814 UniProtKB Chain 1 3023 . . . ID=PRO_0000420031;Note=Genome polyprotein P09814 UniProtKB Chain 1 274 . . . ID=PRO_0000040483;Note=P1 proteinase;Ontology_term=ECO:0000255;evidence=ECO:0000255 P09814 UniProtKB Chain 275 731 . . . ID=PRO_0000040484;Note=Helper component proteinase;Ontology_term=ECO:0000255;evidence=ECO:0000255 P09814 UniProtKB Chain 732 1078 . . . ID=PRO_0000040485;Note=Protein P3;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Chain 1079 1130 . . . ID=PRO_0000040486;Note=6 kDa protein 1;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Chain 1131 1765 . . . ID=PRO_0000040487;Note=Cytoplasmic inclusion protein;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Chain 1766 1818 . . . ID=PRO_0000040488;Note=6 kDa protein 2;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Chain 1819 2001 . . . ID=PRO_0000040489;Note=Viral genome-linked protein;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Chain 2002 2242 . . . ID=PRO_0000040490;Note=Nuclear inclusion protein A;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Chain 2243 2758 . . . ID=PRO_0000040491;Note=Nuclear inclusion protein B;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Chain 2759 3023 . . . ID=PRO_0000040492;Note=Capsid protein;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Domain 132 274 . . . Note=Peptidase S30;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01219 P09814 UniProtKB Domain 609 731 . . . Note=Peptidase C6;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01080 P09814 UniProtKB Domain 1202 1354 . . . Note=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541 P09814 UniProtKB Domain 1367 1532 . . . Note=Helicase C-terminal;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00542 P09814 UniProtKB Domain 2002 2218 . . . Note=Peptidase C4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00766 P09814 UniProtKB Domain 2484 2608 . . . Note=RdRp catalytic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00539 P09814 UniProtKB Motif 325 328 . . . Note=Involved in interaction with stylet and aphid transmission;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Motif 583 585 . . . Note=Involved in virions binding and aphid transmission;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Motif 1304 1307 . . . Note=DEFH box P09814 UniProtKB Motif 1796 1800 . . . Note=GxxxG motif;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30150314;Dbxref=PMID:30150314 P09814 UniProtKB Motif 1856 1863 . . . Note=Nuclear localization signal;Ontology_term=ECO:0000255;evidence=ECO:0000255 P09814 UniProtKB Active site 183 183 . . . Note=For P1 proteinase activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01219 P09814 UniProtKB Active site 192 192 . . . Note=For P1 proteinase activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01219 P09814 UniProtKB Active site 225 225 . . . Note=For P1 proteinase activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01219 P09814 UniProtKB Active site 617 617 . . . Note=For helper component proteinase activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01080 P09814 UniProtKB Active site 690 690 . . . Note=For helper component proteinase activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01080 P09814 UniProtKB Active site 2047 2047 . . . Note=For nuclear inclusion protein A activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00766 P09814 UniProtKB Active site 2082 2082 . . . Note=For nuclear inclusion protein A activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00766 P09814 UniProtKB Active site 2152 2152 . . . Note=For nuclear inclusion protein A activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00766 P09814 UniProtKB Binding site 1215 1222 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541 P09814 UniProtKB Site 274 275 . . . Note=Cleavage%3B by P1 proteinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01219 P09814 UniProtKB Site 731 732 . . . Note=Cleavage%3B by autolysis;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01080 P09814 UniProtKB Site 1078 1079 . . . Note=Cleavage%3B by NIa-pro;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Site 1130 1131 . . . Note=Cleavage%3B by NIa-pro;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Site 1765 1766 . . . Note=Cleavage%3B by NIa-pro;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Site 1818 1819 . . . Note=Cleavage%3B by NIa-pro;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Site 2001 2002 . . . Note=Cleavage%3B by NIa-pro;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Site 2242 2243 . . . Note=Cleavage%3B by NIa-pro;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Site 2758 2759 . . . Note=Cleavage%3B by NIa-pro;Ontology_term=ECO:0000250;evidence=ECO:0000250 P09814 UniProtKB Modified residue 1878 1878 . . . Note=O-(5'-phospho-RNA)-tyrosine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:1702164;Dbxref=PMID:1702164 P09814 UniProtKB Modified residue 1878 1878 . . . Note=O-UMP-tyrosine%3B transient;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:1702164;Dbxref=PMID:1702164 P09814 UniProtKB Mutagenesis 1796 1800 . . . Note=Complete loss of capacity to form vesicles and mislocalization to the Golgi apparatus and plasma membrane. GIGLG->VIGLV;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30150314;Dbxref=PMID:30150314 P09814 UniProtKB Helix 2013 2016 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2019 2026 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2029 2038 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2041 2044 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Helix 2046 2049 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2055 2060 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2063 2069 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Helix 2070 2072 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2075 2077 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2080 2082 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2084 2087 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2110 2117 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2122 2130 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2138 2143 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2155 2158 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Turn 2159 2161 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2164 2172 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Turn 2173 2175 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2178 2182 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Helix 2187 2191 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Helix 2206 2208 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG P09814 UniProtKB Beta strand 2754 2757 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3MMG