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Protein

Wound-induced protein WIN1

Gene

WIN1

Organism
Solanum tuberosum (Potato)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandChitin-binding

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.

Names & Taxonomyi

Protein namesi
Recommended name:
Wound-induced protein WIN1
Gene namesi
Name:WIN1
OrganismiSolanum tuberosum (Potato)
Taxonomic identifieri4113 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum
Proteomesi
  • UP000011115 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Add BLAST25
ChainiPRO_000000528526 – 200Wound-induced protein WIN1Add BLAST175

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi28 ↔ 43PROSITE-ProRule annotation
Disulfide bondi37 ↔ 49PROSITE-ProRule annotation
Disulfide bondi42 ↔ 56PROSITE-ProRule annotation
Disulfide bondi62 ↔ 66PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond

Proteomic databases

PRIDEiP09761.

Expressioni

Inductioni

By wounding.

Gene expression databases

ExpressionAtlasiP09761. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400050016.

Structurei

3D structure databases

ProteinModelPortaliP09761.
SMRiP09761.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 68Chitin-binding type-1PROSITE-ProRule annotationAdd BLAST43
Domaini78 – 199BarwinPROSITE-ProRule annotationAdd BLAST122

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG4742. Eukaryota.
COG3979. LUCA.
OMAiCGNELIG.

Family and domain databases

Gene3Di2.40.40.10. 1 hit.
3.30.60.10. 1 hit.
InterProiView protein in InterPro
IPR018226. Barwin_CS.
IPR001153. Barwin_dom.
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR009009. RlpA-like_DPBB.
PfamiView protein in Pfam
PF00967. Barwin. 1 hit.
PF00187. Chitin_bind_1. 1 hit.
PRINTSiPR00602. BARWIN.
PR00451. CHITINBINDNG.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD004535. Barwin. 1 hit.
PD000609. Chitin_bd_1. 1 hit.
SMARTiView protein in SMART
SM00270. ChtBD1. 1 hit.
SUPFAMiSSF50685. SSF50685. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiView protein in PROSITE
PS00771. BARWIN_1. 1 hit.
PS00772. BARWIN_2. 1 hit.
PS51174. BARWIN_3. 1 hit.
PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P09761-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKLISNSTI LLSLFLFSIA AIANAQQCGR QKGGALCSGN LCCSQFGWCG
60 70 80 90 100
STPEFCSPSQ GCQSRCTGTG GSTPTPSGSA QNVRATYHIY NPQNVGWDLN
110 120 130 140 150
AVSAYCSTWD ANKPLSWRKK YGWTAFCGPV GPRGRDSCGK CLRVTNTRTG
160 170 180 190 200
AQTTVRIVDQ CSNGGLDLDV NVFRQIDTDG NGNHQGHLIV NYQFVDCGDN
Length:200
Mass (Da):21,419
Last modified:July 1, 1989 - v1
Checksum:i8F207A7B2129E0C1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X13497 Genomic DNA. Translation: CAA31851.1.
PIRiS04926.
RefSeqiXP_006347743.1. XM_006347681.2.

Genome annotation databases

EnsemblPlantsiPGSC0003DMT400050017; PGSC0003DMT400050017; PGSC0003DMG400019435.
GeneIDi102582068.
GrameneiPGSC0003DMT400050017; PGSC0003DMT400050017; PGSC0003DMG400019435.
KEGGisot:102582068.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiWIN1_SOLTU
AccessioniPrimary (citable) accession number: P09761
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: July 1, 1989
Last modified: June 7, 2017
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome