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Protein

Wound-induced protein WIN1

Gene

WIN1

Organism
Solanum tuberosum (Potato)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. chitin binding Source: UniProtKB-KW

GO - Biological processi

  1. defense response to bacterium Source: InterPro
  2. defense response to fungus Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Chitin-binding

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.

Names & Taxonomyi

Protein namesi
Recommended name:
Wound-induced protein WIN1
Gene namesi
Name:WIN1
OrganismiSolanum tuberosum (Potato)
Taxonomic identifieri4113 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum
ProteomesiUP000011115: Unplaced

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525Add
BLAST
Chaini26 – 200175Wound-induced protein WIN1PRO_0000005285Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi28 ↔ 43PROSITE-ProRule annotation
Disulfide bondi37 ↔ 49PROSITE-ProRule annotation
Disulfide bondi42 ↔ 56PROSITE-ProRule annotation
Disulfide bondi62 ↔ 66PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond

Expressioni

Inductioni

By wounding.

Structurei

3D structure databases

ProteinModelPortaliP09761.
SMRiP09761. Positions 80-199.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini26 – 6843Chitin-binding type-1PROSITE-ProRule annotationAdd
BLAST
Domaini78 – 199122BarwinPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 barwin domain.PROSITE-ProRule annotation
Contains 1 chitin-binding type-1 domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

OMAiDGNGNHQ.

Family and domain databases

Gene3Di2.40.40.10. 1 hit.
3.30.60.10. 1 hit.
InterProiIPR001153. Barwin.
IPR014733. Barwin-like_endoglucanase.
IPR018226. Barwin_CS.
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR009009. RlpA-like_DPBB.
[Graphical view]
PfamiPF00967. Barwin. 1 hit.
PF00187. Chitin_bind_1. 1 hit.
[Graphical view]
PRINTSiPR00602. BARWIN.
PR00451. CHITINBINDNG.
ProDomiPD004535. Barwin. 1 hit.
PD000609. Chitin_bd_1. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMiSSF50685. SSF50685. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiPS00771. BARWIN_1. 1 hit.
PS00772. BARWIN_2. 1 hit.
PS51174. BARWIN_3. 1 hit.
PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P09761-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKLISNSTI LLSLFLFSIA AIANAQQCGR QKGGALCSGN LCCSQFGWCG
60 70 80 90 100
STPEFCSPSQ GCQSRCTGTG GSTPTPSGSA QNVRATYHIY NPQNVGWDLN
110 120 130 140 150
AVSAYCSTWD ANKPLSWRKK YGWTAFCGPV GPRGRDSCGK CLRVTNTRTG
160 170 180 190 200
AQTTVRIVDQ CSNGGLDLDV NVFRQIDTDG NGNHQGHLIV NYQFVDCGDN
Length:200
Mass (Da):21,419
Last modified:July 1, 1989 - v1
Checksum:i8F207A7B2129E0C1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X13497 Genomic DNA. Translation: CAA31851.1.
PIRiS04926.
RefSeqiXP_006347743.1. XM_006347681.1.

Genome annotation databases

EnsemblPlantsiPGSC0003DMT400050017; PGSC0003DMT400050017; PGSC0003DMG400019435.
GeneIDi102582068.
KEGGisot:102582068.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X13497 Genomic DNA. Translation: CAA31851.1.
PIRiS04926.
RefSeqiXP_006347743.1. XM_006347681.1.

3D structure databases

ProteinModelPortaliP09761.
SMRiP09761. Positions 80-199.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPGSC0003DMT400050017; PGSC0003DMT400050017; PGSC0003DMG400019435.
GeneIDi102582068.
KEGGisot:102582068.

Phylogenomic databases

OMAiDGNGNHQ.

Family and domain databases

Gene3Di2.40.40.10. 1 hit.
3.30.60.10. 1 hit.
InterProiIPR001153. Barwin.
IPR014733. Barwin-like_endoglucanase.
IPR018226. Barwin_CS.
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR009009. RlpA-like_DPBB.
[Graphical view]
PfamiPF00967. Barwin. 1 hit.
PF00187. Chitin_bind_1. 1 hit.
[Graphical view]
PRINTSiPR00602. BARWIN.
PR00451. CHITINBINDNG.
ProDomiPD004535. Barwin. 1 hit.
PD000609. Chitin_bd_1. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMiSSF50685. SSF50685. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiPS00771. BARWIN_1. 1 hit.
PS00772. BARWIN_2. 1 hit.
PS51174. BARWIN_3. 1 hit.
PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Differential expression within a family of novel wound-induced genes in potato."
    Stanford A., Bevan M., Northcote D.
    Mol. Gen. Genet. 215:200-208(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: cv. Maris Piper.
  2. "Genome sequence and analysis of the tuber crop potato."
    The Potato Genome Sequencing Consortium
    Nature 475:189-195(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. DM1-3 516 R44.

Entry informationi

Entry nameiWIN1_SOLTU
AccessioniPrimary (citable) accession number: P09761
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: July 1, 1989
Last modified: January 7, 2015
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.