Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Portal protein

Gene

54

Organism
Varicella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms a portal in the viral capsid through which viral DNA is translocated during DNA packaging. Assembles as a dodecamer at a single fivefold axe of the T=16 icosahedric capsid. Binds to the molecular motor that translocates the viral DNA, termed terminase.UniRule annotation

GO - Biological processi

Keywordsi

Biological processViral genome packaging, Virus exit from host cell

Names & Taxonomyi

Protein namesi
Recommended name:
Portal proteinUniRule annotation
Gene namesi
Name:54
OrganismiVaricella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3)
Taxonomic identifieri10338 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeAlphaherpesvirinaeVaricellovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000002602 Componenti: Genome

Subcellular locationi

  • Virion UniRule annotation
  • Host nucleus UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Host nucleus, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001159101 – 769Portal proteinAdd BLAST769

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi203InterchainUniRule annotation
Disulfide bondi294InterchainUniRule annotation

Keywords - PTMi

Disulfide bond

Proteomic databases

PRIDEiP09302.

Interactioni

Subunit structurei

Homododecamerizes. Interacts with terminase subunits TRM1 and TRM3.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliP09302.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni458 – 479Putative leucine zipper motifUniRule annotationAdd BLAST22

Sequence similaritiesi

Belongs to the herpesviridae portal protein family.UniRule annotation

Phylogenomic databases

OrthoDBiVOG0900002I.

Family and domain databases

HAMAPiMF_04012. HSV_PORTL. 1 hit.
InterProiView protein in InterPro
IPR002660. Herpes_Portal.
PfamiView protein in Pfam
PF01763. Herpes_UL6. 1 hit.

Sequencei

Sequence statusi: Complete.

P09302-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEITSLFNN SSGSEEKRIA SSVSIDQGLN GSNPNDQYKN MFDIYWNEYA
60 70 80 90 100
PDIGFCTFPE EDGWMLIHPT TQSMLFRKIL AGDFGYTDGQ GIYSAVRSTE
110 120 130 140 150
TVIRQVQATV LMNALDATRY EDLAADWEHH IQQCNLHAGA LAERYGLCGE
160 170 180 190 200
SEAVRLAHQV FETWRQTLQS SLLEFLRGIT GCLYTSGLNG RVGFAKYVDW
210 220 230 240 250
IACVGIVPVV RKVRSEQNGT PAPLNTYMGQ AAELSQMLKV ADATLARGAA
260 270 280 290 300
VVTSLVECMQ NVAIMDYDRT RLYYNYNRRL IMAKDDVTGM KGECLVVWPP
310 320 330 340 350
VVCGEGVVFD SPLQRLSGEV LACYALREHA RVCQVLNTAP LRVLIGRRNE
360 370 380 390 400
DDRSHSTRAV DRIMGENDTT RAGSAASRLV KLIVNLKNMR HVGDITETVR
410 420 430 440 450
SYLEETGNHI LEGSGSVDTS QPGFGKANQS FNGGAMSGTT NVQSAFKTSV
460 470 480 490 500
VNSINGMLEG YVNNLFKTIE GLKDVNSDLT ERLQFKEGEL KRLREERVKI
510 520 530 540 550
KPSKGSHITM AEETRIADLN HEVIDLTGII GDDAYIANSF QSRYIPPYGD
560 570 580 590 600
DIKRLSELWK QELVRCFKLH RVNNNQGQEI SVSYSNASIS LLVAPYFSFI
610 620 630 640 650
LRATRLGFLV TQSEVHRSEE ELCQAIFKKA RTESYLSQIR ILYEMQVRAE
660 670 680 690 700
VIKRGPRRTP SPSWGLPDPT EDDERIPEPN KINNQYMHVG YKNLSHFMKG
710 720 730 740 750
HPPERLRVHK VNAADSTLLD KIRANRRRGD GRWDVRNKYT QHFRLQRNDR
760
QLTNTSRRGV GCERRDRRS
Length:769
Mass (Da):86,780
Last modified:July 1, 1989 - v1
Checksum:i5ABD7EDA6D783ECF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X04370 Genomic DNA. Translation: CAA27937.1.
PIRiB27215. WZBE54.

Similar proteinsi

Entry informationi

Entry nameiPORTL_VZVD
AccessioniPrimary (citable) accession number: P09302
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: July 1, 1989
Last modified: February 15, 2017
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families