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Protein

Capsid vertex component 1

Gene

CVC1

Organism
Varicella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Capsid vertex-specific component that plays a role during viral DNA encapsidation, assuring correct genome cleavage and presumably stabilizing capsids that contain full-length viral genomes.UniRule annotation

GO - Biological processi

Keywordsi

Biological processViral genome packaging, Viral release from host cell

Names & Taxonomyi

Protein namesi
Recommended name:
Capsid vertex component 1UniRule annotation
Gene namesi
Name:CVC1UniRule annotation
Ordered Locus Names:43
OrganismiVaricella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3)
Taxonomic identifieri10338 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeAlphaherpesvirinaeVaricellovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000002602 Componenti: Genome

Subcellular locationi

  • Virion UniRule annotation
  • Host nucleus UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Capsid protein, Host nucleus, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001159621 – 676Capsid vertex component 1Add BLAST676

Expressioni

Keywords - Developmental stagei

Late protein

Interactioni

Subunit structurei

Interacts (via C-terminus) with capsid vertex component 2/CVC2.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the herpesviridae CVC1 protein family.UniRule annotation

Phylogenomic databases

OrthoDBiVOG0900002R.

Family and domain databases

HAMAPiMF_04017. HSV_CVC1. 1 hit.
InterProiView protein in InterPro
IPR007640. UL17-like.
PfamiView protein in Pfam
PF04559. Herpes_UL17. 1 hit.

Sequencei

Sequence statusi: Complete.

P09292-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEAHLANETK HALWHNDHTK GLLHVVIPNA GLIAAGIDPA LLILKKPGQR
60 70 80 90 100
FKVEVQTRYH ATGQCEPWCQ VFAAYIPDNA LTNLLIPKTE PFVSHVFSAT
110 120 130 140 150
HNSGGLILSL PVYLSPGLFF DAFNVVAIRI NTGNRKHRDI CIMYAELIPN
160 170 180 190 200
GTRYFADGQR VLLLCKQLIA YIRCTPRLAS SIKIYAEHMV AAMGESHTSN
210 220 230 240 250
GDNIGPVSSI IDLDRQLTSG GIDDSPAETR IQENNRDVLE LIKRAVNIVN
260 270 280 290 300
SRHPVRPSSS RVASGLLQSA KGHGAQTSNT DPINNGSFDG VLEPPGQGRF
310 320 330 340 350
TGKKNNSSAS IPPLQDVLLF TPASTEPQSL MEWFDICYAQ LVSGDTPADF
360 370 380 390 400
WKRRPLSIVP RHYAESPSPL IVVSYNGSSA WGGRITGSPI LYHSAQAIID
410 420 430 440 450
AACINARVDN PQSLHVTARQ ELVARLPFLA NVLNNQTPLP AFKPGAEMFL
460 470 480 490 500
NQVFKQACVT SLTQGLITEL QTNPTLQQLM EYDIADSSQT VIDEIVARTP
510 520 530 540 550
DLIQTIVSVL TEMSMDAFYN SSLMYAVLAY LSSVYTRPQG GGYIPYLHAS
560 570 580 590 600
FPCWLGNRSI YLFDYYNSGG EILKLSKVPV PVALEKVGIG NSTQLRGKFI
610 620 630 640 650
RSADIVDIGI CSKYLPGQCY AYICLGFNQQ LQSILVLPGG FAACFCITDT
660 670
LQAALPASLI GPILDRFCFS IPNPHK
Length:676
Mass (Da):73,909
Last modified:July 1, 1989 - v1
Checksum:iE25CFD38ED2B0E10
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X04370 Genomic DNA. Translation: CAA27926.1.
PIRiH27341. WZBE43.

Similar proteinsi

Entry informationi

Entry nameiCVC1_VZVD
AccessioniPrimary (citable) accession number: P09292
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: July 1, 1989
Last modified: November 22, 2017
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families