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Protein

Superoxide dismutase [Mn] 3.1, mitochondrial

Gene

SODA.4

Organism
Zea mays (Maize)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at transcript leveli

Functioni

Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.

Cofactori

Mn2+By similarityNote: Binds 1 Mn2+ ion per subunit.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi59ManganeseBy similarity1
Metal bindingi107ManganeseBy similarity1
Metal bindingi196ManganeseBy similarity1
Metal bindingi200ManganeseBy similarity1

GO - Molecular functioni

  • manganese ion binding Source: AgBase
  • superoxide dismutase activity Source: AgBase

GO - Biological processi

  • protein homotetramerization Source: AgBase
  • response to herbicide Source: AgBase
  • response to oxidative stress Source: AgBase
  • response to reactive oxygen species Source: AgBase
  • response to xenobiotic stimulus Source: AgBase
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Mn] 3.1, mitochondrial (EC:1.15.1.1)
Gene namesi
Name:SODA.4
Synonyms:SOD3, SOD3.1
OrganismiZea mays (Maize)
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea
Proteomesi
  • UP000007305 Componenti: Unplaced

Organism-specific databases

MaizeGDBi47587.

Subcellular locationi

GO - Cellular componenti

  • mitochondrial matrix Source: UniProtKB-SubCell
  • mitochondrion Source: AgBase
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 31MitochondrionSequence analysisAdd BLAST31
ChainiPRO_000003289532 – 235Superoxide dismutase [Mn] 3.1, mitochondrialAdd BLAST204

Proteomic databases

PaxDbiP09233.
PRIDEiP09233.

Interactioni

Subunit structurei

Homotetramer.

Protein-protein interaction databases

STRINGi4577.GRMZM2G059991_P01.

Structurei

3D structure databases

ProteinModelPortaliP09233.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG0876. Eukaryota.
COG0605. LUCA.
HOGENOMiHOG000013583.
KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P09233-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALRTLASKK VLSFPFGGAG RPLAAAASAR GVTTVTLPDL SYDFGALEPA
60 70 80 90 100
ISGEIMRLHH QKHHATYVAN YNKALEQLET AVSKGDASAV VQLQAAIKFN
110 120 130 140 150
GGGHVNHSIF WKNLKPISEG GGEPPHGKLG WAIDEDFGSF EALVKKMNAE
160 170 180 190 200
GAALQGSGWV WLALDKEAKK VSVETTANQD PLVTKGASLV PLLGIDVWEH
210 220 230
AYYLQYKNVR PDYLNNIWKV MNWKYAGEVY ENVLA
Length:235
Mass (Da):25,545
Last modified:July 1, 1989 - v1
Checksum:iAD51BAD0F44FDE56
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X12540 mRNA. Translation: CAA31058.1.
RefSeqiNP_001105742.1. NM_001112272.2.
UniGeneiZm.94773.

Genome annotation databases

GeneIDi542764.
KEGGizma:542764.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X12540 mRNA. Translation: CAA31058.1.
RefSeqiNP_001105742.1. NM_001112272.2.
UniGeneiZm.94773.

3D structure databases

ProteinModelPortaliP09233.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4577.GRMZM2G059991_P01.

Proteomic databases

PaxDbiP09233.
PRIDEiP09233.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi542764.
KEGGizma:542764.

Organism-specific databases

MaizeGDBi47587.

Phylogenomic databases

eggNOGiKOG0876. Eukaryota.
COG0605. LUCA.
HOGENOMiHOG000013583.
KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSODM1_MAIZE
AccessioniPrimary (citable) accession number: P09233
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: July 1, 1989
Last modified: October 5, 2016
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.