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Protein

Tail fiber assembly protein homolog from lambdoid prophage e14

Gene

tfaE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11120-MONOMER.
ECOL316407:JW1142-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Tail fiber assembly protein homolog from lambdoid prophage e14
Gene namesi
Name:tfaE
Synonyms:ycfA
Ordered Locus Names:b1156, JW1142
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11120. tfaE.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 200200Tail fiber assembly protein homolog from lambdoid prophage e14PRO_0000070305Add
BLAST

Proteomic databases

PaxDbiP09153.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
glnLP0AFB54EBI-9133821,EBI-701156

Protein-protein interaction databases

BioGridi4262857. 21 interactions.
IntActiP09153. 16 interactions.
STRINGi511145.b1156.

Structurei

3D structure databases

ProteinModelPortaliP09153.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the tfa family.Curated

Phylogenomic databases

eggNOGiENOG4108US3. Bacteria.
ENOG4111IKE. LUCA.
HOGENOMiHOG000118670.
OMAiPYDEWDG.
OrthoDBiEOG644ZPG.
PhylomeDBiP09153.

Family and domain databases

InterProiIPR003458. Phage_T4_Gp38_tail_assem.
[Graphical view]
PfamiPF02413. Caudo_TAP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P09153-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHKAILNSDL IATKAGDVTV YNYDGETREY ISTSNEYLAV GVGIPACSCL
60 70 80 90 100
DAPGTHKAGY AICRSADFNS WEYVPDHRGE TVYSTKTGES KEIKAPGDYP
110 120 130 140 150
ENTTTIAPLS PYDKWDGEKW VTDTEAQHSA AVDAAEAQRQ SLIDAAMASI
160 170 180 190 200
SLIQLKLQAG RKLTQAETTR LNAVLDYIDA VTATDTSTAP DVIWPELPEA
Length:200
Mass (Da):21,662
Last modified:November 1, 1997 - v2
Checksum:i694DB2A2F57B75D4
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti200 – 2001A → RRPFNIWRTGCINQFQCFQI IQPQIILFQLIFFKSSQCSL TLPLSAIDKISCIRDKHLLL KVRISDFIIMSTDNLFNRRR KNRKIDHASFSLRF in CAA25946 (PubMed:3894006).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X01805 Genomic DNA. Translation: CAA25946.1.
U00096 Genomic DNA. Translation: AAC74240.1.
AP009048 Genomic DNA. Translation: BAE76382.1.
PIRiA64861.
RefSeqiNP_415674.1. NC_000913.3.
WP_000548498.1. NZ_CP010440.1.

Genome annotation databases

EnsemblBacteriaiAAC74240; AAC74240; b1156.
BAE76382; BAE76382; BAE76382.
GeneIDi945723.
KEGGiecj:JW1142.
eco:b1156.
PATRICi32117549. VBIEscCol129921_1197.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X01805 Genomic DNA. Translation: CAA25946.1.
U00096 Genomic DNA. Translation: AAC74240.1.
AP009048 Genomic DNA. Translation: BAE76382.1.
PIRiA64861.
RefSeqiNP_415674.1. NC_000913.3.
WP_000548498.1. NZ_CP010440.1.

3D structure databases

ProteinModelPortaliP09153.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262857. 21 interactions.
IntActiP09153. 16 interactions.
STRINGi511145.b1156.

Proteomic databases

PaxDbiP09153.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74240; AAC74240; b1156.
BAE76382; BAE76382; BAE76382.
GeneIDi945723.
KEGGiecj:JW1142.
eco:b1156.
PATRICi32117549. VBIEscCol129921_1197.

Organism-specific databases

EchoBASEiEB1110.
EcoGeneiEG11120. tfaE.

Phylogenomic databases

eggNOGiENOG4108US3. Bacteria.
ENOG4111IKE. LUCA.
HOGENOMiHOG000118670.
OMAiPYDEWDG.
OrthoDBiEOG644ZPG.
PhylomeDBiP09153.

Enzyme and pathway databases

BioCyciEcoCyc:EG11120-MONOMER.
ECOL316407:JW1142-MONOMER.

Miscellaneous databases

PROiP09153.

Family and domain databases

InterProiIPR003458. Phage_T4_Gp38_tail_assem.
[Graphical view]
PfamiPF02413. Caudo_TAP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The invertible P-DNA segment in the chromosome of Escherichia coli."
    Plasterk R.H.A., van de Putte P.
    EMBO J. 4:237-242(1985) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiTFAE_ECOLI
AccessioniPrimary (citable) accession number: P09153
Secondary accession number(s): P75985, Q2MBH4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: November 1, 1997
Last modified: January 20, 2016
This is version 98 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.