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Protein

Neuromedin-B

Gene

NMB

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Stimulates smooth muscle contraction in a manner similar to that of bombesin.

GO - Molecular functioni

  • hormone activity Source: ProtInc
  • neuromedin B receptor binding Source: Ensembl

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-HSA-375276. Peptide ligand-binding receptors.
R-HSA-416476. G alpha (q) signalling events.
SIGNORiP08949.

Names & Taxonomyi

Protein namesi
Recommended name:
Neuromedin-B
Cleaved into the following 2 chains:
Gene namesi
Name:NMB
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 15

Organism-specific databases

EuPathDBiHostDB:ENSG00000197696.9.
HGNCiHGNC:7842. NMB.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

Pathology & Biotechi

Organism-specific databases

DisGeNETi4828.
OpenTargetsiENSG00000197696.
PharmGKBiPA31654.

Polymorphism and mutation databases

BioMutaiNMB.
DMDMi281185514.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Add BLAST24
PeptideiPRO_000000301725 – 56Neuromedin-B-32Add BLAST32
PeptideiPRO_000000301847 – 56Neuromedin-B10
PropeptideiPRO_000000301960 – 121Add BLAST62

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei56Methionine amide1 Publication1

Keywords - PTMi

Amidation, Cleavage on pair of basic residues

Proteomic databases

PaxDbiP08949.
PeptideAtlasiP08949.
PRIDEiP08949.
TopDownProteomicsiP08949-2. [P08949-2]

PTM databases

iPTMnetiP08949.
PhosphoSitePlusiP08949.

Expressioni

Gene expression databases

BgeeiENSG00000197696.
CleanExiHS_NMB.
GenevisibleiP08949. HS.

Organism-specific databases

HPAiCAB019302.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
BIRC2Q134905EBI-12302085,EBI-514538

GO - Molecular functioni

  • hormone activity Source: ProtInc
  • neuromedin B receptor binding Source: Ensembl

Protein-protein interaction databases

BioGridi110892. 17 interactors.
IntActiP08949. 2 interactors.
MINTiMINT-7969962.
STRINGi9606.ENSP00000378089.

Structurei

Secondary structure

1121
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi51 – 54Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1C98NMR-A47-56[»]
1C9ANMR-A47-56[»]
ProteinModelPortaliP08949.
SMRiP08949.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP08949.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IX9W. Eukaryota.
ENOG410Z1WN. LUCA.
GeneTreeiENSGT00390000015835.
HOGENOMiHOG000063661.
HOVERGENiHBG079570.
InParanoidiP08949.
KOiK05223.
OMAiCAHPGKV.
OrthoDBiEOG091G145J.
PhylomeDBiP08949.
TreeFamiTF336860.

Family and domain databases

InterProiView protein in InterPro
IPR000874. Bombesin.
PfamiView protein in Pfam
PF02044. Bombesin. 1 hit.
PROSITEiView protein in PROSITE
PS00257. BOMBESIN. 1 hit.

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: P08949-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MARRAGGARM FGSLLLFALL AAGVAPLSWD LPEPRSRASK IRVHSRGNLW
60 70 80 90 100
ATGHFMGKKS LEPSSPSPLG TAPHTSLRDQ RLQLSHDLLG ILLLKKALGV
110 120
SLSRPAPQIQ YRRLLVQILQ K
Length:121
Mass (Da):13,252
Last modified:December 15, 2009 - v4
Checksum:i10E16BA4886F03FB
GO
Isoform 2 (identifier: P08949-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     111-121: YRRLLVQILQK → EAAGTNTAEMTPIMGQTQQRGLDCAHPGKVLNGTLLMAPSGCKS

Note: No experimental confirmation available.
Show »
Length:154
Mass (Da):16,309
Checksum:i3FFBCF2BB83E2D84
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti68 – 76PLGTAPHTS → HWGQLPTPP in AAA59934 (PubMed:2458345).Curated9

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_06036973P → T1 PublicationCorresponds to variant dbSNP:rs1051168Ensembl.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_000548111 – 121YRRLLVQILQK → EAAGTNTAEMTPIMGQTQQR GLDCAHPGKVLNGTLLMAPS GCKS in isoform 2. 1 PublicationAdd BLAST11

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M21551 mRNA. Translation: AAA59934.1.
AC048382 Genomic DNA. No translation available.
BC007407 mRNA. Translation: AAH07407.1.
BC007431 mRNA. Translation: AAH07431.1.
BC008603 mRNA. Translation: AAH08603.1.
CCDSiCCDS10332.1. [P08949-1]
CCDS42076.1. [P08949-2]
PIRiA28945.
RefSeqiNP_066563.2. NM_021077.3. [P08949-1]
NP_995580.1. NM_205858.1. [P08949-2]
UniGeneiHs.386470.

Genome annotation databases

EnsembliENST00000360476; ENSP00000353664; ENSG00000197696. [P08949-1]
ENST00000394588; ENSP00000378089; ENSG00000197696. [P08949-2]
GeneIDi4828.
KEGGihsa:4828.
UCSCiuc002bkz.4. human. [P08949-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Similar proteinsi

Entry informationi

Entry nameiNMB_HUMAN
AccessioniPrimary (citable) accession number: P08949
Secondary accession number(s): Q96A06, Q96HH5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1988
Last sequence update: December 15, 2009
Last modified: September 27, 2017
This is version 167 of the entry and version 4 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Human chromosome 15
    Human chromosome 15: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  6. SIMILARITY comments
    Index of protein domains and families