ID CO5_RAT Reviewed; 1681 AA. AC P08650; A0A096P6L9; Q63078; DT 01-AUG-1988, integrated into UniProtKB/Swiss-Prot. DT 29-SEP-2021, sequence version 3. DT 24-JAN-2024, entry version 145. DE RecName: Full=Complement C5; DE Contains: DE RecName: Full=Complement C5 beta chain; DE Contains: DE RecName: Full=Complement C5 alpha chain; DE Contains: DE RecName: Full=C5a anaphylatoxin; DE Contains: DE RecName: Full=Complement C5 alpha' chain; DE Flags: Precursor; GN Name=C5; OS Rattus norvegicus (Rat). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Rattus. OX NCBI_TaxID=10116; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Brown Norway; RX PubMed=15057822; DOI=10.1038/nature02426; RA Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., RA Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., RA Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., RA Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., RA Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., RA Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., RA Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., RA Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., RA Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., RA Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., RA Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., RA Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., RA Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., RA Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., RA Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., RA Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., RA Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., RA Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., RA Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., RA Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., RA Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., RA Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., RA Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., RA Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., RA Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., RA Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., RA Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., RA Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., RA Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., RA Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., RA Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., RA Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., RA Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., RA Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., RA Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., RA Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., RA Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., RA Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., RA Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., RA Mockrin S., Collins F.S.; RT "Genome sequence of the Brown Norway rat yields insights into mammalian RT evolution."; RL Nature 428:493-521(2004). RN [2] RP NUCLEOTIDE SEQUENCE [MRNA] OF 679-755. RC STRAIN=Lewis; TISSUE=Liver; RX PubMed=9116048; DOI=10.1016/s0167-4781(97)00006-7; RA Rothermel E., Rolf O., Goetze O., Zwirner J.; RT "Nucleotide and corrected amino acid sequence of the functional recombinant RT rat anaphylatoxin C5a."; RL Biochim. Biophys. Acta 1351:9-12(1997). RN [3] RP PROTEIN SEQUENCE OF 679-755. RA Cui L.-X., Ferreri K., Hugli T.E.; RT "Characterization of rat C5a, a uniquely active spasmogen."; RL Complement 2:18-19(1985). RN [4] RP PROTEIN SEQUENCE OF 679-755, AND SUBCELLULAR LOCATION. RC TISSUE=Serum; RX PubMed=7987212; DOI=10.1002/pro.5560030803; RA Cui L.-X., Carney D.F., Hugli T.E.; RT "Primary structure and functional characterization of rat C5a: an RT anaphylatoxin with unusually high potency."; RL Protein Sci. 3:1169-1177(1994). RN [5] {ECO:0007744|PDB:6JV7, ECO:0007744|PDB:6JV8} RP X-RAY CRYSTALLOGRAPHY (1.31 ANGSTROMS) OF 679-749, AND DISULFIDE BONDS. RA Zuo C.; RT "Chimeric protein probes for C5a receptors through fusion of anaphylatoxin RT C5a core region with a small-molecule antagonist."; RL Submitted (APR-2019) to the PDB data bank. CC -!- FUNCTION: Activation of C5 by a C5 convertase initiates the spontaneous CC assembly of the late complement components, C5-C9, into the membrane CC attack complex. C5b has a transient binding site for C6. The C5b-C6 CC complex is the foundation upon which the lytic complex is assembled. CC -!- FUNCTION: [C5a anaphylatoxin]: Derived from proteolytic degradation of CC complement C5, C5a anaphylatoxin is a mediator of local inflammatory CC process. Binding to the receptor C5AR1 induces a variety of responses CC including intracellular calcium release, contraction of smooth muscle, CC increased vascular permeability, and histamine release from mast cells CC and basophilic leukocytes. C5a is also a potent chemokine which CC stimulates the locomotion of polymorphonuclear leukocytes and directs CC their migration toward sites of inflammation. CC {ECO:0000250|UniProtKB:P01031}. CC -!- SUBUNIT: C5 precursor is first processed by the removal of 4 basic CC residues, forming two chains, beta and alpha, linked by a disulfide CC bond. C5 convertase activates C5 by cleaving the alpha chain, releasing CC C5a anaphylatoxin and generating C5b (beta chain + alpha' chain). CC {ECO:0000250|UniProtKB:P01031}. CC -!- SUBUNIT: [C5a anaphylatoxin]: Interacts with C5AR1. CC {ECO:0000250|UniProtKB:P01031}. CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:7987212}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AABR07051491; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AABR07051499; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AABR07051492; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AABR07051493; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AABR07051494; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AABR07051495; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AABR07051496; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AABR07051497; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AABR07051498; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AABR07051500; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; X91892; CAA62994.1; -; mRNA. DR PIR; A57689; A57689. DR PDB; 6JV7; X-ray; 1.31 A; A=679-749. DR PDB; 6JV8; X-ray; 1.58 A; A=680-755. DR PDBsum; 6JV7; -. DR PDBsum; 6JV8; -. DR AlphaFoldDB; P08650; -. DR SMR; P08650; -. DR STRING; 10116.ENSRNOP00000025534; -. DR GlyCosmos; P08650; 6 sites, No reported glycans. DR GlyGen; P08650; 6 sites. DR PaxDb; 10116-ENSRNOP00000025534; -. DR UCSC; RGD:2237; rat. DR AGR; RGD:2237; -. DR RGD; 2237; C5. DR VEuPathDB; HostDB:ENSRNOG00000018899; -. DR eggNOG; KOG1366; Eukaryota. DR HOGENOM; CLU_001634_4_2_1; -. DR InParanoid; P08650; -. DR PRO; PR:P08650; -. DR Proteomes; UP000002494; Chromosome 3. DR Bgee; ENSRNOG00000018899; Expressed in liver and 4 other cell types or tissues. DR GO; GO:0005615; C:extracellular space; IDA:RGD. DR GO; GO:0005579; C:membrane attack complex; ISO:RGD. DR GO; GO:0031714; F:C5a anaphylatoxin chemotactic receptor binding; IDA:RGD. DR GO; GO:0004866; F:endopeptidase inhibitor activity; IEA:InterPro. DR GO; GO:0006935; P:chemotaxis; IDA:RGD. DR GO; GO:0006957; P:complement activation, alternative pathway; IEA:UniProtKB-KW. DR GO; GO:0006958; P:complement activation, classical pathway; IEA:UniProtKB-KW. DR GO; GO:0032835; P:glomerulus development; ISO:RGD. DR GO; GO:0001701; P:in utero embryonic development; ISO:RGD. DR GO; GO:0090594; P:inflammatory response to wounding; ISO:RGD. DR GO; GO:0006874; P:intracellular calcium ion homeostasis; IDA:RGD. DR GO; GO:0001822; P:kidney development; ISO:RGD. DR GO; GO:0031640; P:killing of cells of another organism; IEA:UniProtKB-KW. DR GO; GO:0002523; P:leukocyte migration involved in inflammatory response; IMP:RGD. DR GO; GO:0033602; P:negative regulation of dopamine secretion; IDA:RGD. DR GO; GO:0010760; P:negative regulation of macrophage chemotaxis; ISO:RGD. DR GO; GO:0010700; P:negative regulation of norepinephrine secretion; IDA:RGD. DR GO; GO:0001780; P:neutrophil homeostasis; ISO:RGD. DR GO; GO:0045766; P:positive regulation of angiogenesis; ISO:RGD. DR GO; GO:0032722; P:positive regulation of chemokine production; ISO:RGD. DR GO; GO:0050921; P:positive regulation of chemotaxis; IDA:RGD. DR GO; GO:0007204; P:positive regulation of cytosolic calcium ion concentration; IDA:RGD. DR GO; GO:0010575; P:positive regulation of vascular endothelial growth factor production; ISO:RGD. DR CDD; cd00017; ANATO; 1. DR CDD; cd02896; complement_C3_C4_C5; 1. DR Gene3D; 1.50.10.20; -; 1. DR Gene3D; 2.20.130.20; -; 1. DR Gene3D; 2.40.50.120; -; 1. DR Gene3D; 2.60.120.1540; -; 1. DR Gene3D; 2.60.40.1930; -; 3. DR Gene3D; 2.60.40.1940; -; 1. DR Gene3D; 6.20.50.160; -; 1. DR Gene3D; 2.60.40.690; Alpha-macroglobulin, receptor-binding domain; 1. DR Gene3D; 1.20.91.20; Anaphylotoxins (complement system); 1. DR Gene3D; 2.60.40.10; Immunoglobulins; 2. DR InterPro; IPR009048; A-macroglobulin_rcpt-bd. DR InterPro; IPR036595; A-macroglobulin_rcpt-bd_sf. DR InterPro; IPR011625; A2M_N_BRD. DR InterPro; IPR011626; Alpha-macroglobulin_TED. DR InterPro; IPR000020; Anaphylatoxin/fibulin. DR InterPro; IPR018081; Anaphylatoxin_comp_syst. DR InterPro; IPR041425; C3/4/5_MG1. DR InterPro; IPR048843; C5_CUB. DR InterPro; IPR013783; Ig-like_fold. DR InterPro; IPR001599; Macroglobln_a2. DR InterPro; IPR002890; MG2. DR InterPro; IPR041555; MG3. DR InterPro; IPR040839; MG4. DR InterPro; IPR001134; Netrin_domain. DR InterPro; IPR018933; Netrin_module_non-TIMP. DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase. DR InterPro; IPR008993; TIMP-like_OB-fold. DR PANTHER; PTHR11412:SF83; COMPLEMENT C5; 1. DR PANTHER; PTHR11412; MACROGLOBULIN / COMPLEMENT; 1. DR Pfam; PF00207; A2M; 1. DR Pfam; PF07703; A2M_BRD; 1. DR Pfam; PF07677; A2M_recep; 1. DR Pfam; PF01821; ANATO; 1. DR Pfam; PF21309; C5_CUB; 1. DR Pfam; PF17790; MG1; 1. DR Pfam; PF01835; MG2; 1. DR Pfam; PF17791; MG3; 1. DR Pfam; PF17789; MG4; 1. DR Pfam; PF01759; NTR; 1. DR Pfam; PF07678; TED_complement; 1. DR SMART; SM01360; A2M; 1. DR SMART; SM01359; A2M_N_2; 1. DR SMART; SM01361; A2M_recep; 1. DR SMART; SM00104; ANATO; 1. DR SMART; SM00643; C345C; 1. DR SUPFAM; SSF49410; Alpha-macroglobulin receptor domain; 1. DR SUPFAM; SSF47686; Anaphylotoxins (complement system); 1. DR SUPFAM; SSF48239; Terpenoid cyclases/Protein prenyltransferases; 1. DR SUPFAM; SSF50242; TIMP-like; 1. DR PROSITE; PS01177; ANAPHYLATOXIN_1; 1. DR PROSITE; PS01178; ANAPHYLATOXIN_2; 1. DR PROSITE; PS50189; NTR; 1. PE 1: Evidence at protein level; KW 3D-structure; Cleavage on pair of basic residues; KW Complement alternate pathway; Complement pathway; Cytolysis; KW Direct protein sequencing; Disulfide bond; Glycoprotein; Immunity; KW Inflammatory response; Innate immunity; Membrane attack complex; KW Reference proteome; Secreted; Signal. FT SIGNAL 1..18 FT /evidence="ECO:0000255" FT CHAIN 19..674 FT /note="Complement C5 beta chain" FT /evidence="ECO:0000305" FT /id="PRO_0000453364" FT PROPEP 675..678 FT /evidence="ECO:0000250|UniProtKB:P01031" FT /id="PRO_0000453365" FT CHAIN 679..1681 FT /note="Complement C5 alpha chain" FT /evidence="ECO:0000305" FT /id="PRO_0000453366" FT CHAIN 679..755 FT /note="C5a anaphylatoxin" FT /evidence="ECO:0000269|PubMed:7987212, ECO:0000269|Ref.3" FT /id="PRO_0000005996" FT CHAIN 756..1681 FT /note="Complement C5 alpha' chain" FT /evidence="ECO:0000305" FT /id="PRO_0000453367" FT DOMAIN 702..736 FT /note="Anaphylatoxin-like" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00022" FT DOMAIN 1536..1680 FT /note="NTR" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00295" FT REGION 696..725 FT /note="Involved in C5AR1 binding" FT /evidence="ECO:0000250|UniProtKB:P01031" FT CARBOHYD 72 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 321 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 915 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1119 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1318 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1634 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT DISULFID 567..814 FT /evidence="ECO:0000250|UniProtKB:P01031" FT DISULFID 635..670 FT /evidence="ECO:0000250|UniProtKB:P01031" FT DISULFID 702..728 FT /evidence="ECO:0007744|PDB:6JV7, ECO:0007744|PDB:6JV8" FT DISULFID 703..735 FT /evidence="ECO:0007744|PDB:6JV7, ECO:0007744|PDB:6JV8" FT DISULFID 715..736 FT /evidence="ECO:0007744|PDB:6JV7, ECO:0007744|PDB:6JV8" FT DISULFID 860..887 FT /evidence="ECO:0000250|UniProtKB:P01031" FT DISULFID 870..1531 FT /evidence="ECO:0000250|UniProtKB:P01031" FT DISULFID 1105..1163 FT /evidence="ECO:0000250|UniProtKB:P01031" FT DISULFID 1379..1509 FT /evidence="ECO:0000250|UniProtKB:P01031" FT DISULFID 1409..1478 FT /evidence="ECO:0000250|UniProtKB:P01031" FT DISULFID 1524..1529 FT /evidence="ECO:0000250|UniProtKB:P01031" FT DISULFID 1536..1610 FT /evidence="ECO:0000250|UniProtKB:P01031" FT DISULFID 1557..1680 FT /evidence="ECO:0000250|UniProtKB:P01031" FT DISULFID 1658..1661 FT /evidence="ECO:0000250|UniProtKB:P01031" FT CONFLICT 733 FT /note="N -> K (in Ref. 3; AA sequence and 4; AA sequence)" FT /evidence="ECO:0000305" FT CONFLICT 739..741 FT /note="ADK -> DP (in Ref. 3; AA sequence)" FT /evidence="ECO:0000305" FT CONFLICT 741 FT /note="K -> H (in Ref. 4; AA sequence)" FT /evidence="ECO:0000305" FT CONFLICT 745..747 FT /note="ESH -> NES (in Ref. 4; AA sequence)" FT /evidence="ECO:0000305" FT CONFLICT 745..747 FT /note="ESH -> NQS (in Ref. 3; AA sequence)" FT /evidence="ECO:0000305" FT HELIX 683..691 FT /evidence="ECO:0007829|PDB:6JV7" FT HELIX 697..707 FT /evidence="ECO:0007829|PDB:6JV7" FT HELIX 715..719 FT /evidence="ECO:0007829|PDB:6JV7" FT HELIX 726..749 FT /evidence="ECO:0007829|PDB:6JV7" SQ SEQUENCE 1681 AA; 189081 MW; 56D466A91F0D153C CRC64; MGLWGLLCLL IFLDKTWGQE QTYVISAPKI FRVGSSENVV IQAHGYTEAF DATISLKSYP DKKVTYSSGY VNLSPENKFQ NSALLTLPPK QFPRDENPVS HVYLEVVSMH FSKSKKIPIT YDNGFLFIHT DKPVYTPDQS VKIRVYSLSD DLKPAKRETV LTFVDPEGTE VDIVEENDYT GIISFPDFKI PSNPKYGVWT IKAKYKKDFT TTGTAYFEVK EYVLPRFSVS IEPESNFIGY KNFKNFEITV KARYFYNKMV PDAEVYIFFG LREDIKEDEK QMMHKAMQAA TLMDGAAQTC WLAETEVREI NYNMFEDRNN NYSYIACTVT ESSGGFSEEA EIPGIKYVLS PYTLNLVATP LFLKPGIPFS IKVQVKDSLE QLVGGVPVTL MAQTVNVNQE TSDLEPKRSI THSADGVASF VVNLPSEVTS LKFEVKTDAP ELPEENQASK EYEAVTYSSL SQSYIYIGWT ENYKPMLVGE YLNIIVTPKS PYIDKITHYN YLILSKGKIV QYGTKEKLLY SSYQNINIPV TQDMVPSARL LVYYIVTGEQ TAELVADAVW INIEEKCGNQ LQVHLSPDKD VYSPGQTVSL DMVTEADSWV ALSAVDSAVY GVRGKAKRAM QRVFQAFDDK SDLGCGAGGG RDNVDVFHLA GLTFLTNANA DDSQYHDDSC KEILRPKRDL QLLHQKVEEQ AAKYKHRVPK KCCYDGAREN KYETCEQRVA RVTIGPHCIR AFNECCTIAD KIRKESHHKG MLLGRIQIKA LLPVMKAEIR SYFPESWLWE VHRVPKRNQL QVALPDSLTT WEIQGIGISD NGICVADTLK AKVFKDVFLE MNIPYSVVRG EQIQLKGTVY NYRTSGTMFC VKMSAVEGIC TPGSSAASPQ TSRSSRCVRQ RIEGSSSHLV TFSLLPLEIG LHSINFSLET SFGKEILVKT LRVVPEGIKR ESYAGVTLDP RGVYGIVNRR KEFPYRIPLD LVPKTNVKRI LSVKGLLIGE FLSTVLSKEG IDILTHLPKG SAEAELMSIV PVFYVFHYLE AGNHWNIFHP DTLARKQSLQ KKIKEGLVSV MSYRNADYSY SMWKGASSSA WLTAFALRVL GQVNKYVKQD QYSICNSLLW LIEKCQLENG SFKENSQYLP IKLQGTLPAE AQENTLYLTA FSVIGIRKAI GICPTEKIYT ALAKADSFLL ERTLPSKSTF TLAIVAYALS LGDRTHPKFR SIVSALKREA LVKGDPPIYR FWRDTLQRPD SSAPNSGTAG MVETTAYALL TSLNLKETSY VNPIIKWLSE EQRYGGGFYS TQDTINAIEG LTEYSLLVKQ LHLDMDINVS YKHKGDFYQY KVTEKNFLGR PVEVPLNDDL IVTTGYSSGL ATVYVKTVVH KTSVAEEFCS FYLKIDTQEV EASSYLSYSD SGHKRIIACA SYKPSKEESA SGSSHAVMDI LLPTGIGANQ EDLRALVEGV DQLLTDYQIK DSHVILQLNS IPSRDFLCVR FRIFELFQVG FLNPATFTVY EYHRPDKQCT MIYSTSDTNL QRVCEGAACK CVEADCGQLQ AELDLAISAD TRKETACKPE IAYAYKVRIT SATEENIFVK YTATLLDIYK TGEAAAEKDS EITFIKKISC TNANLVKGKQ YLIMGKEALQ IKHNFSFKYI YPLDSSTWIE YWPTDTTCPS CQAFVANLDE FAEDIFLNGC E //