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P08633

- NODM_RHILV

UniProt

P08633 - NODM_RHILV

Protein

Glutamine--fructose-6-phosphate aminotransferase [isomerizing]

Gene

nodM

Organism
Rhizobium leguminosarum bv. viciae
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 84 (01 Oct 2014)
      Sequence version 3 (23 Jan 2007)
      Previous versions | rss
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    Functioni

    Involved in the production of the root hair deformation (HAD) factor specifically on medicago.

    Catalytic activityi

    L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei2 – 21Nucleophile; for GATase activityBy similarity
    Active sitei603 – 6031For Fru-6P isomerization activityBy similarity

    GO - Molecular functioni

    1. carbohydrate binding Source: InterPro
    2. glutamine-fructose-6-phosphate transaminase (isomerizing) activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbohydrate biosynthetic process Source: InterPro
    2. glutamine metabolic process Source: UniProtKB-HAMAP
    3. nodulation Source: UniProtKB-KW

    Keywords - Molecular functioni

    Aminotransferase, Transferase

    Keywords - Biological processi

    Nodulation

    Protein family/group databases

    MEROPSiC44.971.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC:2.6.1.16)
    Short name:
    GFAT
    Alternative name(s):
    Nodulation protein M
    Gene namesi
    Name:nodM
    Encoded oniPlasmid sym pRL1JI0 Publication
    OrganismiRhizobium leguminosarum bv. viciae
    Taxonomic identifieri387 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

    Subcellular locationi

    Cytoplasm By similarity

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 608607Glutamine--fructose-6-phosphate aminotransferase [isomerizing]PRO_0000135436Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliP08633.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini2 – 217216Glutamine amidotransferase type-2Add
    BLAST
    Domaini283 – 422140SIS 1Add
    BLAST
    Domaini456 – 598143SIS 2Add
    BLAST

    Sequence similaritiesi

    Contains 2 SIS domains.Curated

    Keywords - Domaini

    Glutamine amidotransferase, Repeat

    Family and domain databases

    Gene3Di3.60.20.10. 1 hit.
    HAMAPiMF_00164. GlmS.
    InterProiIPR017932. GATase_2_dom.
    IPR000583. GATase_dom.
    IPR005855. GlmS_trans.
    IPR029055. Ntn_hydrolases_N.
    IPR001347. SIS.
    [Graphical view]
    PANTHERiPTHR10937:SF0. PTHR10937:SF0. 1 hit.
    PfamiPF00310. GATase_2. 1 hit.
    PF01380. SIS. 2 hits.
    [Graphical view]
    SUPFAMiSSF56235. SSF56235. 1 hit.
    TIGRFAMsiTIGR01135. glmS. 1 hit.
    PROSITEiPS51278. GATASE_TYPE_2. 1 hit.
    PS51464. SIS. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P08633-1 [UniParc]FASTAAdd to Basket

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    MCGIVGIVGH KPVSERLIEA LGRLEYRGYD SSGVATIFEG ELHRRRAEGK    50
    LGNLKTRLKE APLSGTVGIA HTRWATHGAP TECNAHPHFT DGVAVVHNGI 100
    IENFSKLKDA LAEVGTKFQT DTDTEVIAHL LTKFRRDGMG CLEAMHAMLK 150
    CVEGAFALAI LFEDDPATIM VARNGPPLVI GHGDGEMFLG SDAIALAPFT 200
    NDITYLNDGD WAVVGKTSVQ VFDIEGNVVT RPRHISLATA DLVGKGNHPH 250
    FMEKEIYEQP EVIARALGHY INVNDSHVTT TSTDIDFAGV ESLAISACGT 300
    AYLAGLIGKY WFERYARLIV EIDVASEFRY REIPLSPRSA ALFISQSGET 350
    ADTLASLRYC KAHGLRIGAV VNTRESTMAR EADAIFPILA GPEIGVASTK 400
    AFTCQLAVLA ALRIGAGKAR GTITDDEEQV LVQSLATLPG VMRQVLNDIT 450
    PEIELLSREL SHYRDVLYLG RGTSFPLAME GALKLKEVSY IHAEGYAAGE 500
    LKHGPIALID ENMPVIVIAP HDRFFDKTVS NMQEVAARGG RIILITDETG 550
    ASMSKLPTMH TIVLPDVAEI IAPMIFSLPL QLLAYHTAVV MGADVDQPRN 600
    LAKSVTVE 608
    Length:608
    Mass (Da):65,794
    Last modified:January 23, 2007 - v3
    Checksum:i8D2DEF05E0A70E70
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y00548 Genomic DNA. Translation: CAA68626.1.
    PIRiS01040.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y00548 Genomic DNA. Translation: CAA68626.1 .
    PIRi S01040.

    3D structure databases

    ProteinModelPortali P08633.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    MEROPSi C44.971.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 3.60.20.10. 1 hit.
    HAMAPi MF_00164. GlmS.
    InterProi IPR017932. GATase_2_dom.
    IPR000583. GATase_dom.
    IPR005855. GlmS_trans.
    IPR029055. Ntn_hydrolases_N.
    IPR001347. SIS.
    [Graphical view ]
    PANTHERi PTHR10937:SF0. PTHR10937:SF0. 1 hit.
    Pfami PF00310. GATase_2. 1 hit.
    PF01380. SIS. 2 hits.
    [Graphical view ]
    SUPFAMi SSF56235. SSF56235. 1 hit.
    TIGRFAMsi TIGR01135. glmS. 1 hit.
    PROSITEi PS51278. GATASE_TYPE_2. 1 hit.
    PS51464. SIS. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Characterization of the Rhizobium leguminosarum genes nodLMN involved in efficient host-specific nodulation."
      Surin B.P., Downie J.A.
      Mol. Microbiol. 2:173-183(1988) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: 248.

    Entry informationi

    Entry nameiNODM_RHILV
    AccessioniPrimary (citable) accession number: P08633
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 1, 1988
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 84 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Plasmid

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3