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P08289

- PPBT_RAT

UniProt

P08289 - PPBT_RAT

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Protein

Alkaline phosphatase, tissue-nonspecific isozyme

Gene
Alpl
Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Catalytic activityi

A phosphate monoester + H2O = an alcohol + phosphate.

Cofactori

Binds 1 magnesium ion By similarity.
Binds 2 zinc ions By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi60 – 601Magnesium By similarity
Metal bindingi60 – 601Zinc 1 By similarity
Active sitei110 – 1101Phosphoserine intermediate
Metal bindingi110 – 1101Zinc 1 By similarity
Metal bindingi173 – 1731Magnesium By similarity
Metal bindingi332 – 3321Magnesium By similarity
Metal bindingi337 – 3371Zinc 2 By similarity
Metal bindingi341 – 3411Zinc 2; via tele nitrogen By similarity
Metal bindingi378 – 3781Zinc 1 By similarity
Metal bindingi379 – 3791Zinc 1; via tele nitrogen By similarity
Metal bindingi454 – 4541Zinc 2; via tele nitrogen By similarity

GO - Molecular functioni

  1. alkaline phosphatase activity Source: RGD
  2. metal ion binding Source: UniProtKB-KW
  3. pyrophosphatase activity Source: Ensembl

GO - Biological processi

  1. cellular response to organic cyclic compound Source: Ensembl
  2. cementum mineralization Source: RGD
  3. dephosphorylation Source: RGD
  4. developmental process involved in reproduction Source: Ensembl
  5. endochondral ossification Source: Ensembl
  6. response to antibiotic Source: Ensembl
  7. response to glucocorticoid Source: RGD
  8. response to lipopolysaccharide Source: RGD
  9. response to vitamin D Source: Ensembl
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Ligandi

Magnesium, Metal-binding, Zinc

Enzyme and pathway databases

SABIO-RKP08289.

Names & Taxonomyi

Protein namesi
Recommended name:
Alkaline phosphatase, tissue-nonspecific isozyme (EC:3.1.3.1)
Short name:
AP-TNAP
Short name:
TNSALP
Alternative name(s):
Alkaline phosphatase liver/bone/kidney isozyme
Gene namesi
Name:Alpl
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 5

Organism-specific databases

RGDi2100. Alpl.

Subcellular locationi

Cell membrane; Lipid-anchorGPI-anchor 1 Publication

GO - Cellular componenti

  1. anchored component of membrane Source: UniProtKB-KW
  2. extracellular matrix Source: Ensembl
  3. extracellular membrane-bounded organelle Source: Ensembl
  4. extracellular space Source: RGD
  5. plasma membrane Source: RGD
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 17171 PublicationAdd
BLAST
Chaini18 – 501484Alkaline phosphatase, tissue-nonspecific isozymePRO_0000024027Add
BLAST
Propeptidei502 – 52423Removed in mature form Reviewed predictionPRO_0000024028Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi139 ↔ 201 By similarity
Glycosylationi140 – 1401N-linked (GlcNAc...) Reviewed prediction
Glycosylationi230 – 2301N-linked (GlcNAc...) Reviewed prediction
Glycosylationi271 – 2711N-linked (GlcNAc...) Reviewed prediction
Glycosylationi303 – 3031N-linked (GlcNAc...) Reviewed prediction
Glycosylationi430 – 4301N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi489 ↔ 497 By similarity
Lipidationi501 – 5011GPI-anchor amidated serine Reviewed prediction

Keywords - PTMi

Disulfide bond, Glycoprotein, GPI-anchor, Lipoprotein, Phosphoprotein

Proteomic databases

PaxDbiP08289.
PRIDEiP08289.

PTM databases

PhosphoSiteiP08289.
UniCarbKBiP08289.

Expressioni

Gene expression databases

GenevestigatoriP08289.

Interactioni

Subunit structurei

Homodimer.

Protein-protein interaction databases

IntActiP08289. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliP08289.
SMRiP08289. Positions 18-493.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG1785.
GeneTreeiENSGT00390000008704.
HOGENOMiHOG000099118.
HOVERGENiHBG007345.
InParanoidiP08289.
KOiK01077.
OMAiTWKSFKP.
OrthoDBiEOG7SN8CH.
PhylomeDBiP08289.
TreeFamiTF323513.

Family and domain databases

Gene3Di3.40.720.10. 1 hit.
InterProiIPR017849. Alkaline_Pase-like_a/b/a.
IPR001952. Alkaline_phosphatase.
IPR018299. Alkaline_phosphatase_AS.
IPR017850. Alkaline_phosphatase_core.
[Graphical view]
PfamiPF00245. Alk_phosphatase. 1 hit.
[Graphical view]
PRINTSiPR00113. ALKPHPHTASE.
SMARTiSM00098. alkPPc. 1 hit.
[Graphical view]
SUPFAMiSSF53649. SSF53649. 1 hit.
PROSITEiPS00123. ALKALINE_PHOSPHATASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P08289-1 [UniParc]FASTAAdd to Basket

« Hide

MILPFLVLAI GTCLTNSFVP EKEKDPSYWR QQAQETLKNA LKLQKLNTNV    50
AKNIIMFLGD GMGVSTVTAA RILKGQLHHN TGEETRLEMD KFPFVALSKT 100
YNTNAQVPDS AGTATAYLCG VKANEGTVGV SAATERTRCN TTQGNEVTSI 150
LRWAKDAGKS VGIVTTTRVN HATPSAAYAH SADRDWYSDN EMPPEALSQG 200
CKDIAYQLMH NIKDIDVIMG GGRKYMYPKN RTDVEYELDE KARGTRLDGL 250
DLISIWKSFK PRHKHSHYVW NRTELLALDP SRVDYLLGLF EPGDMQYELN 300
RNNLTDPSLS EMVEVALRIL TKNPKGFFLL VEGGRIDHGH HEGKAKQALH 350
EAVEMDEAIG KAGTMTSQKD TLTVVTADHS HVFTFGGYTP RGNSIFGLAP 400
MVSDTDKKPF TAILYGNGPG YKVVDGEREN VSMVDYAHNN YQAQSAVPLR 450
HETHGGEDVA VFAKGPMAHL LHGVHEQNYI PHVMAYASCI GANLDHCAWA 500
SSASSPSPGA LLLPLALFPL RTLF 524
Length:524
Mass (Da):57,659
Last modified:May 1, 1992 - v2
Checksum:iBD75A4B87117DF03
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti12 – 121T → P in AAA41845. 1 Publication
Sequence conflicti116 – 1161A → Y1 Publication
Sequence conflicti193 – 1931P → R in AAA41845. 1 Publication
Sequence conflicti234 – 2341V → E in CAA68703. 1 Publication
Sequence conflicti254 – 2541S → T in CAA68703. 1 Publication
Sequence conflicti331 – 3311V → E in CAA68703. 1 Publication
Sequence conflicti374 – 3741V → L in CAA68703. 1 Publication
Sequence conflicti380 – 3889SHVFTFGGY → HPTFSRLVA1 Publication
Sequence conflicti391 – 3911R → Q1 Publication
Sequence conflicti463 – 4631A → C in CAA68703. 1 Publication
Sequence conflicti474 – 4741V → I in CAA68703. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Y00714 mRNA. Translation: CAA68703.1.
J03572 mRNA. Translation: AAA41845.1.
X16028
, X16029, X16030, X16031, X16032, X16033, X16034, X16035, X16036, X16037, X16038 Genomic DNA. Translation: CAA34160.1.
BC088399 mRNA. Translation: AAH88399.1.
PIRiA28114.
S00289.
RefSeqiNP_037191.1. NM_013059.1.
XP_006239198.1. XM_006239136.1.
XP_006239199.1. XM_006239137.1.
UniGeneiRn.82764.

Genome annotation databases

EnsembliENSRNOT00000019004; ENSRNOP00000019004; ENSRNOG00000013954.
GeneIDi25586.
KEGGirno:25586.
UCSCiRGD:2100. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Y00714 mRNA. Translation: CAA68703.1 .
J03572 mRNA. Translation: AAA41845.1 .
X16028
, X16029 , X16030 , X16031 , X16032 , X16033 , X16034 , X16035 , X16036 , X16037 , X16038 Genomic DNA. Translation: CAA34160.1 .
BC088399 mRNA. Translation: AAH88399.1 .
PIRi A28114.
S00289.
RefSeqi NP_037191.1. NM_013059.1.
XP_006239198.1. XM_006239136.1.
XP_006239199.1. XM_006239137.1.
UniGenei Rn.82764.

3D structure databases

ProteinModelPortali P08289.
SMRi P08289. Positions 18-493.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P08289. 1 interaction.

Chemistry

BindingDBi P08289.
ChEMBLi CHEMBL2729.

PTM databases

PhosphoSitei P08289.
UniCarbKBi P08289.

Proteomic databases

PaxDbi P08289.
PRIDEi P08289.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000019004 ; ENSRNOP00000019004 ; ENSRNOG00000013954 .
GeneIDi 25586.
KEGGi rno:25586.
UCSCi RGD:2100. rat.

Organism-specific databases

CTDi 249.
RGDi 2100. Alpl.

Phylogenomic databases

eggNOGi COG1785.
GeneTreei ENSGT00390000008704.
HOGENOMi HOG000099118.
HOVERGENi HBG007345.
InParanoidi P08289.
KOi K01077.
OMAi TWKSFKP.
OrthoDBi EOG7SN8CH.
PhylomeDBi P08289.
TreeFami TF323513.

Enzyme and pathway databases

SABIO-RK P08289.

Miscellaneous databases

NextBioi 607251.
PROi P08289.

Gene expression databases

Genevestigatori P08289.

Family and domain databases

Gene3Di 3.40.720.10. 1 hit.
InterProi IPR017849. Alkaline_Pase-like_a/b/a.
IPR001952. Alkaline_phosphatase.
IPR018299. Alkaline_phosphatase_AS.
IPR017850. Alkaline_phosphatase_core.
[Graphical view ]
Pfami PF00245. Alk_phosphatase. 1 hit.
[Graphical view ]
PRINTSi PR00113. ALKPHPHTASE.
SMARTi SM00098. alkPPc. 1 hit.
[Graphical view ]
SUPFAMi SSF53649. SSF53649. 1 hit.
PROSITEi PS00123. ALKALINE_PHOSPHATASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Structure and expression of rat osteosarcoma (ROS 17/2.8) alkaline phosphatase: product of a single copy gene."
    Thiede M.A., Yoon K., Golub E.E., Noda M., Rodan G.A.
    Proc. Natl. Acad. Sci. U.S.A. 85:319-323(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Placenta.
  2. "Primary structure of rat liver alkaline phosphatase deduced from its cDNA."
    Misumi Y., Tashiro K., Hattori M., Sakaki Y., Ikehara Y.
    Biochem. J. 249:661-668(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: Wistar.
    Tissue: Liver.
  3. "Isolation and characterization of a rat liver alkaline phosphatase gene. A single gene with two promoters."
    Toh Y., Yamamoto M., Endo H., Misumi Y., Ikehara Y.
    Eur. J. Biochem. 182:231-237(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: Sprague-Dawley.
    Tissue: Liver.
  4. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Kidney.
  5. "Chemical identification of lipid components in the membranous form of rat liver alkaline phosphatase."
    Ogata S., Hayashi Y., Yasutake K., Ikehara Y.
    J. Biochem. 102:1609-1615(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 18-47, GPI-ANCHOR.
    Tissue: Liver.

Entry informationi

Entry nameiPPBT_RAT
AccessioniPrimary (citable) accession number: P08289
Secondary accession number(s): P14055, P70707
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1988
Last sequence update: May 1, 1992
Last modified: May 14, 2014
This is version 125 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Miscellaneous

In most mammals there are four different isozymes: placental, placental-like, intestinal and tissue non-specific (liver/bone/kidney).

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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