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P08287 (H11L_CHICK) Reviewed, UniProtKB/Swiss-Prot

Last modified November 16, 2011. Version 84. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Histone H1.11L
OrganismGallus gallus (Chicken)
Taxonomic identifier9031 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galliformes › Phasianidae › Phasianinae › Gallus

Protein attributes

Sequence length225 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Histones H1 are necessary for the condensation of nucleosome chains into higher order structures.

Subcellular location

Nucleus. Chromosome.

Sequence similarities

Belongs to the histone H1/H5 family.

Contains 1 H15 (linker histone H1/H5 globular) domain.

Ontologies

Keywords
   Cellular componentChromosome
Nucleus
   LigandDNA-binding
   PTMAcetylation
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological processnucleosome assembly

Inferred from electronic annotation. Source: InterPro

   Cellular componentnucleosome

Inferred from electronic annotation. Source: InterPro

nucleus

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed
Chain2 – 225224Histone H1.11L
PRO_0000195931

Regions

Domain41 – 11474H15

Amino acid modifications

Modified residue21N-acetylserine By similarity

Secondary structure

1 .............. 225
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P08287 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: BFDA6897A7D5599F

FASTA22522,528
        10         20         30         40         50         60 
MSETAPAPAA EAAPAAAPAP AKAAAKKPKK AAGGAKARKP AGPSVTELIT KAVSASKERK 

        70         80         90        100        110        120 
GLSLAALKKA LAAGGYDVEK NNSRIKLGLK SLVSKGTLVQ TKGTGASGSF RLSKKPGEVK 

       130        140        150        160        170        180 
EKAPKKKASA AKPKKPAAKK PAAAAKKPKK AVAVKKSPKK AKKPAASATK KSAKSPKKVT 

       190        200        210        220 
KAVKPKKAVA AKSPAKAKAV KPKAAKPKAA KPKAAKAKKA AAKKK

« Hide

References

[1]"Characterization of the chicken histone H1 gene complement. Generation of a complete set of vertebrate H1 protein sequences."
Coles L.S., Robins A.J., Madley L.K., Wells J.R.E.
J. Biol. Chem. 262:9656-9663(1987) [PubMed: 3597432] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Homo- and heteronuclear two-dimensional NMR studies of the globular domain of histone H1: sequential assignment and secondary structure."
Cerf C., Lippens G., Muyldermans S., Segers A., Ramakrishnan V., Wodak S.J., Hallenga K., Wyns L.
Biochemistry 32:11345-11351(1993) [PubMed: 8218199] [Abstract]
Cited for: STRUCTURE BY NMR OF 41-114.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		M17019 Genomic DNA. Translation: AAA48789.1.
IPIIPI00581595.
PIRB28456.
RefSeqNP_001035733.1. NM_001040643.1.
UniGeneGga.41653.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1GHCNMR-A41-113[»]
ProteinModelPortalP08287.
SMRP08287. Positions 41-114.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000038058; ENSGALP00000037266; ENSGALG00000011759.
GeneID427892.
KEGGgga:427892.

Organism-specific databases

CTD3006.

Phylogenomic databases

GeneTreeENSGT00550000074201.
HOGENOMHBG446956.
InParanoidP08287.

Family and domain databases

InterProIPR005818. Histone_H1/H5.
IPR005819. Histone_H5.
IPR011991. WHTH_trsnscrt_rep_DNA-bd.
[Graphical view]
Gene3DG3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
KOK11275.
PfamPF00538. Linker_histone. 1 hit.
[Graphical view]
PRINTSPR00624. HISTONEH5.
SMARTSM00526. H15. 1 hit.
[Graphical view]
PROSITEPS51504. H15. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH11L_CHICK
AccessionPrimary (citable) accession number: P08287
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1988
Last sequence update: January 23, 2007
Last modified: November 16, 2011
This is version 84 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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