P08019 (AMYG_YEAST) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 104.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Glucoamylase, intracellular sporulation-specific EC=3.2.1.3 Alternative name(s): 1,4-alpha-D-glucan glucohydrolase Glucan 1,4-alpha-glucosidase | ||||||
| Gene names |
| ||||||
| Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||||||
| Taxonomic identifier | 559292 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 549 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Catalytic activity | Hydrolysis of terminal (1->4)-linked alpha-D-glucose residues successively from non-reducing ends of the chains with release of beta-D-glucose. |
| Sequence similarities | Belongs to the glycosyl hydrolase 15 family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Carbohydrate metabolism Polysaccharide degradation Sporulation |
| Molecular function | Glycosidase Hydrolase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | ascospore formation Inferred from expression pattern. Source: SGD glycogen catabolic processInferred from mutant phenotype. Source: SGD |
| Cellular component | fungal-type vacuole Inferred from direct assay. Source: SGD |
| Molecular function | glucan 1,4-alpha-glucosidase activity Inferred from direct assay. Source: SGD |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 549 | 549 | Glucoamylase, intracellular sporulation-specific | PRO_0000186120 | |||||
Sites | |||||||||
| Active site | 261 | 1 | Proton acceptor By similarity | ||||||
| Active site | 264 | 1 | Proton donor By similarity | ||||||
| Binding site | 198 | 1 | Substrate By similarity | ||||||
Experimental info | |||||||||
| Sequence conflict | 184 | 1 | D → H in CAA32071. Ref.4 | ||||||
| Sequence conflict | 504 – 549 | 46 | HVGTD…VLQSL → TWEQTGN in AAA35042. Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Gene fusion is a possible mechanism underlying the evolution of STA1." Yamashita I., Nakamura M., Fukui S. J. Bacteriol. 169:2142-2149(1987) [PubMed: 3106330] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "The nucleotide sequence of Saccharomyces cerevisiae chromosome IX." Churcher C.M., Bowman S., Badcock K., Bankier A.T., Brown D., Chillingworth T., Connor R., Devlin K., Gentles S., Hamlin N., Harris D.E., Horsnell T., Hunt S., Jagels K., Jones M., Lye G., Moule S., Odell C. Barrell B.G.Nature 387:84-87(1997) [PubMed: 9169870] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204511 / S288c / AB972. |
| [3] | Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c. |
| [4] | "Similar short elements in the 5' regions of the STA2 and SGA genes from Saccharomyces cerevisiae." Pardo J.M., Ianez E., Zalacain M., Claros M.G., Jimenez A. FEBS Lett. 239:179-184(1988) [PubMed: 3141213] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-190. Strain: SPX101-1C. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | Z38125 Genomic DNA. Translation: CAA86282.1. M16166 Genomic DNA. Translation: AAA35042.1. X13858 Genomic DNA. Translation: CAA32071.1. BK006942 Genomic DNA. Translation: DAA08454.1. |
| PIR | S48474. |
| RefSeq | NP_012167.1. NM_001179447.1. |
3D structure databases | |
| ProteinModelPortal | P08019. |
| SMR | P08019. Positions 72-548. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P08019. 1 interaction. |
| MINT | MINT-2784002. |
| STRING | P08019. |
Protein family/group databases | |
| CAZy | GH15. Glycoside Hydrolase Family 15. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblFungi | YIL099W; YIL099W; YIL099W. |
| GeneID | 854708. |
| KEGG | sce:YIL099W. |
| NMPDR | fig|4932.3.peg.1694. |
Organism-specific databases | |
| CYGD | YIL099w. |
| SGD | S000001361. SGA1. |
Phylogenomic databases | |
| eggNOG | fuNOG04064. |
| GeneTree | EFGT00050000000930. |
| HOGENOM | HBG396553. |
| OMA | PQNDGPA. |
| OrthoDB | EOG4FFH90. |
Enzyme and pathway databases | |
| BioCyc | MetaCyc:MONOMER-13682. |
Gene expression databases | |
| ArrayExpress | P08019. |
| Genevestigator | P08019. |
| GermOnline | YIL099W. Saccharomyces cerevisiae. |
Family and domain databases | |
| InterPro | IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR000165. Glucoamylase. IPR011613. Glyco_hydro_15. [Graphical view] |
| Gene3D | G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit. |
| KO | K01178. |
| Pfam | PF00723. Glyco_hydro_15. 1 hit. [Graphical view] |
| PRINTS | PR00736. GLHYDRLASE15. |
| SUPFAM | SSF48208. Glyco_trans_6hp. 1 hit. |
| PROSITE | PS00820. GLUCOAMYLASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 977366. |
Entry information
| Entry name | AMYG_YEAST | ||||||||
| Accession | Primary (citable) accession number: P08019 Secondary accession number(s): D6VVI8, Q07070 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Fungal Protein Annotation Program | ||||||||
Relevant documents
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome IX Yeast (Saccharomyces cerevisiae) chromosome IX: entries and gene names |
| Glycosyl hydrolases Classification of glycosyl hydrolase families and list of entries |
| SIMILARITY comments Index of protein domains and families |

Clusters with