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Protein

Oligopeptide transport system permease protein OppC

Gene

oppC

Organism
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane.

GO - Biological processi

Keywordsi

Biological processPeptide transport, Protein transport, Transport

Enzyme and pathway databases

BioCyciSENT99287:G1FZD-1761-MONOMER

Protein family/group databases

TCDBi3.A.1.5.1 the atp-binding cassette (abc) superfamily

Names & Taxonomyi

Protein namesi
Recommended name:
Oligopeptide transport system permease protein OppC
Gene namesi
Name:oppC
Ordered Locus Names:STM1744
OrganismiSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Taxonomic identifieri99287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000001014 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 37Cytoplasmic1 PublicationAdd BLAST37
Transmembranei38 – 59HelicalCuratedAdd BLAST22
Topological domaini60 – 102Extracellular1 PublicationAdd BLAST43
Transmembranei103 – 122HelicalCuratedAdd BLAST20
Topological domaini123 – 139Cytoplasmic1 PublicationAdd BLAST17
Transmembranei140 – 160HelicalCuratedAdd BLAST21
Topological domaini161 – 163Extracellular1 Publication3
Transmembranei164 – 180HelicalCuratedAdd BLAST17
Topological domaini181 – 215Cytoplasmic1 PublicationAdd BLAST35
Transmembranei216 – 236HelicalCuratedAdd BLAST21
Topological domaini237 – 267Extracellular1 PublicationAdd BLAST31
Transmembranei268 – 290HelicalCuratedAdd BLAST23
Topological domaini291 – 302Cytoplasmic1 PublicationAdd BLAST12

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000601511 – 302Oligopeptide transport system permease protein OppCAdd BLAST302

Proteomic databases

PaxDbiP08006
PRIDEiP08006

Interactioni

Protein-protein interaction databases

STRINGi99287.STM1744

Structurei

3D structure databases

ProteinModelPortaliP08006
SMRiP08006
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini101 – 290ABC transmembrane type-1PROSITE-ProRule annotationAdd BLAST190

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105C2T Bacteria
COG1173 LUCA
HOGENOMiHOG000171367
KOiK15582
OMAiPTGIWWT
PhylomeDBiP08006

Family and domain databases

CDDicd06261 TM_PBP2, 1 hit
Gene3Di1.10.3720.10, 1 hit
InterProiView protein in InterPro
IPR000515 MetI-like
IPR035906 MetI-like_sf
IPR025966 OppC_N
PfamiView protein in Pfam
PF00528 BPD_transp_1, 1 hit
PF12911 OppC_N, 1 hit
SUPFAMiSSF161098 SSF161098, 1 hit
PROSITEiView protein in PROSITE
PS50928 ABC_TM1, 1 hit

Sequencei

Sequence statusi: Complete.

P08006-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMLSKKNSET LENFSEKLEV EGRSLWQDAR RRFMHNRAAV ASLIVLFLIA
60 70 80 90 100
LFVTVAPMLS QFTYFDTDWG MMSSAPDMAS GHYFGTDSSG RDLLVRVAIG
110 120 130 140 150
GRISLMVGIA AALVAVIVGT LYGSLSGYLG GKIDSVMMRL LEILNSFPFM
160 170 180 190 200
FFVILLVTFF GQNILLIFVA IGMVSWLDMA RIVRGQTLSL KRKEFIEAAQ
210 220 230 240 250
VGGVSTASIV IRHIVPNVLG VVVVYASLLV PSMILFESFL SFLGLGTQEP
260 270 280 290 300
LSSWGALLSD GANSMEVSPW LLLFPAGFLV VTLFCFNFIG DGLRDALDPK

DR
Length:302
Mass (Da):33,090
Last modified:August 1, 1988 - v1
Checksum:i0E6FE57404F7339E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X05491 Genomic DNA Translation: CAA29041.1
AE006468 Genomic DNA Translation: AAL20662.1
PIRiC29333 QREBOC
RefSeqiNP_460703.1, NC_003197.2
WP_000979653.1, NC_003197.2

Genome annotation databases

EnsemblBacteriaiAAL20662; AAL20662; STM1744
GeneIDi1253263
KEGGistm:STM1744
PATRICifig|99287.12.peg.1841

Similar proteinsi

Entry informationi

Entry nameiOPPC_SALTY
AccessioniPrimary (citable) accession number: P08006
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 1, 1988
Last sequence update: August 1, 1988
Last modified: May 23, 2018
This is version 121 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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