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P07979

- GUB_NICPL

UniProt

P07979 - GUB_NICPL

Protein

Lichenase

Gene

GN1

Organism
Nicotiana plumbaginifolia (Leadwort-leaved tobacco) (Tex-Mex tobacco)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 81 (01 Oct 2014)
      Sequence version 3 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of (1->4)-beta-D-glucosidic linkages in beta-D-glucans containing (1->3)- and (1->4)-bonds.

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei271 – 2711NucleophileBy similarity
    Active sitei328 – 3281Proton donorBy similarity

    GO - Molecular functioni

    1. licheninase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Enzyme and pathway databases

    UniPathwayiUPA00350.

    Protein family/group databases

    CAZyiGH17. Glycoside Hydrolase Family 17.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Lichenase (EC:3.2.1.73)
    Alternative name(s):
    Endo-beta-1,3-1,4 glucanase
    Gene namesi
    Name:GN1
    OrganismiNicotiana plumbaginifolia (Leadwort-leaved tobacco) (Tex-Mex tobacco)
    Taxonomic identifieri4092 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3030Sequence AnalysisAdd
    BLAST
    Chaini31 – 370340LichenasePRO_0000011898Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliP07979.
    SMRiP07979. Positions 33-346.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 17 family.Curated

    Keywords - Domaini

    Signal

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR000490. Glyco_hydro_17.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF00332. Glyco_hydro_17. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P07979-1 [UniParc]FASTAAdd to Basket

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    MDTSHKHIAL QMAAIILLGL LVSSTEIVGA QSVGVCYGML GNNLPPASQV    50
    VQLYKSKNIR RMRLYDPNQA ALQALRGSNI EVMLGVPNSD LQNIAANPSN 100
    ANNWVQRNVR NFWPAVKFRY IAVGNEVSPV TGTSSLTRYL LPAMRNIRNA 150
    ISSAGLQNNI KVSSSVDMTL IGNSFPPSQG SFRNDVRSFI DPIIGFVRRI 200
    NSPLLVNIYP YFSYAGNPRD ISLPYALFTA PNVVVQDGSL GYRNLFDAMS 250
    DAVYAALSRA GGGSIEIVVS ESGWPSAGAF AATTNNAATY YKNLIQHVKR 300
    GSPRRPNKVI ETYLFAMFDE NNKNPELEKH FGLFSPNKQP KYPLSFGFSD 350
    RYWDISAENN ATAASLISEM 370
    Length:370
    Mass (Da):40,599
    Last modified:November 1, 1997 - v3
    Checksum:iCB359DFD188F84C1
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti164 – 1641S → T in AAA34078. (PubMed:2152158)Curated
    Sequence conflicti199 – 1991R → G in AAA34078. (PubMed:2152158)Curated
    Sequence conflicti250 – 2501S → L in AAA34078. (PubMed:2152158)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X07280 mRNA. Translation: CAA30261.1.
    M63634 Genomic DNA. Translation: AAA34078.1.
    PIRiJQ0982.
    S03209.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X07280 mRNA. Translation: CAA30261.1 .
    M63634 Genomic DNA. Translation: AAA34078.1 .
    PIRi JQ0982.
    S03209.

    3D structure databases

    ProteinModelPortali P07979.
    SMRi P07979. Positions 33-346.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH17. Glycoside Hydrolase Family 17.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Enzyme and pathway databases

    UniPathwayi UPA00350 .

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR000490. Glyco_hydro_17.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF00332. Glyco_hydro_17. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00587. GLYCOSYL_HYDROL_F17. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Primary structure of a hormonally regulated beta-glucanase of Nicotiana plumbaginifolia."
      de Loose M., Alliotte T., Gheysen G., Genetello C., Gielen J., Soetaert P., van Montagu M., Inze D.
      Gene 70:13-23(1988) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. P2.
    2. "Tissue-specific and pathogen-induced regulation of a Nicotiana plumbaginifolia beta-1,3-glucanase gene."
      Castresana C., de Carvalho F., Gheysen G., Habets M., Inze D., van Montagu M.
      Plant Cell 2:1131-1143(1990) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

    Entry informationi

    Entry nameiGUB_NICPL
    AccessioniPrimary (citable) accession number: P07979
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 1, 1988
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 81 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    The expression of beta-glucanase is influenced by auxins and cytokinins.

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3