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P07938 (SIG1S_REOVL) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Protein sigma-1-small

Short name=Sigma1s
Alternative name(s):
Sigma-s
Sigma1NS
Sigma1bNS
p14
Gene names
Name:S1
OrganismReovirus type 1 (strain Lang) (T1L) (Mammalian orthoreovirus 1) [Reference proteome]
Taxonomic identifier10884 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSpinareovirinaeOrthoreovirus
Virus hostMammalia [TaxID: 40674]

Protein attributes

Sequence length119 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the orthoreovirus sigma-1s protein family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 119119Protein sigma-1-small
PRO_0000222757

Experimental info

Sequence conflict711V → L in AAA47243. Ref.2

Sequences

Sequence LengthMass (Da)Tools
P07938 [UniParc].

Last modified August 1, 1988. Version 1.
Checksum: D6EEE53353BC6190

FASTA11913,989
        10         20         30         40         50         60 
MAPSQKKSRK SRNKSRSTLM ISGLPILNST DLEDRLLTSA IASQPLSQDW VRWIIDLWVS 

        70         80         90        100        110 
RVRSRNYLTQ VARTLRAYPH WVTESMLSNH ELTVWIRSRL ISLDEHPLWR QMLEAYGQN 

« Hide

References

[1]"Sequences of the S1 genes of the three serotypes of reovirus."
Cashdollar L.W., Chmelo R.A., Wiener J.R., Joklik W.K.
Proc. Natl. Acad. Sci. U.S.A. 82:24-28(1985) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
[2]"Biosynthesis of reovirus-specified polypeptides. Molecular cDNA cloning and nucleotide sequence of the reovirus serotype 1 Lang strain bicistronic s1 mRNA which encodes the minor capsid polypeptide sigma 1a and the nonstructural polypeptide sigma 1bNS."
Munemitsu S.M., Atwater J.A., Samuel C.E.
Biochem. Biophys. Res. Commun. 140:508-514(1986) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
[3]"Structure of the reovirus cell-attachment protein: a model for the domain organization of sigma 1."
Nibert M.L., Dermody T.S., Fields B.N.
J. Virol. 64:2976-2989(1990) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M10260 Genomic RNA. Translation: AAA66878.1.
M14779 Genomic RNA. Translation: AAA47277.1.
M35963 Genomic RNA. Translation: AAA47243.1.
PIRMNXR1B. B26436.
B34829.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR003478. Capsid_sigma_1s.
[Graphical view]
PfamPF02454. Sigma_1s. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSIG1S_REOVL
AccessionPrimary (citable) accession number: P07938
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1988
Last sequence update: August 1, 1988
Last modified: April 3, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families