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Protein

Ferredoxin, chloroplastic

Gene

PETF

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

Cofactori

[2Fe-2S] clusterNote: Binds 1 [2Fe-2S] cluster.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi69Iron-sulfur (2Fe-2S)1
Metal bindingi74Iron-sulfur (2Fe-2S)1
Metal bindingi77Iron-sulfur (2Fe-2S)1
Metal bindingi107Iron-sulfur (2Fe-2S)1

GO - Molecular functioni

Keywordsi

Biological processElectron transport, Transport
Ligand2Fe-2S, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ferredoxin, chloroplastic
Gene namesi
Name:PETF
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 32Chloroplast1 PublicationAdd BLAST32
ChainiPRO_000000882833 – 126Ferredoxin, chloroplasticAdd BLAST94

Interactioni

Subunit structurei

Forms a complex with heterodimeric ferredoxin-thioredoxin reductase (FTR) and thioredoxin.By similarity

Structurei

Secondary structure

1126
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi3 – 12Combined sources10
Helixi16 – 18Combined sources3
Turni19 – 22Combined sources4
Beta strandi23 – 25Combined sources3
Beta strandi33 – 39Combined sources7
Beta strandi42 – 48Combined sources7
Beta strandi50 – 52Combined sources3
Helixi54 – 61Combined sources8
Helixi75 – 77Combined sources3
Beta strandi80 – 84Combined sources5
Beta strandi86 – 90Combined sources5
Helixi96 – 101Combined sources6
Beta strandi111 – 118Combined sources8
Helixi123 – 126Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FCTNMR-A1-32[»]
2MH7NMR-A33-126[»]
2N0SNMR-B33-126[»]
ProteinModelPortaliP07839
SMRiP07839
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP07839

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 1232Fe-2S ferredoxin-typePROSITE-ProRule annotationAdd BLAST91

Sequence similaritiesi

Belongs to the 2Fe2S plant-type ferredoxin family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiENOG410J0RP Eukaryota
COG0633 LUCA
KOiK02639
OMAiSAMASYN

Family and domain databases

CDDicd00207 fer2, 1 hit
Gene3Di3.10.20.30, 1 hit
InterProiView protein in InterPro
IPR036010 2Fe-2S_ferredoxin-like_sf
IPR001041 2Fe-2S_ferredoxin-type
IPR006058 2Fe2S_fd_BS
IPR012675 Beta-grasp_dom_sf
IPR010241 Fd_pln
IPR023383 Ferredoxin_transit_pept
PfamiView protein in Pfam
PF11591 2Fe-2S_Ferredox, 1 hit
PF00111 Fer2, 1 hit
SUPFAMiSSF54292 SSF54292, 1 hit
TIGRFAMsiTIGR02008 fdx_plant, 1 hit
PROSITEiView protein in PROSITE
PS00197 2FE2S_FER_1, 1 hit
PS51085 2FE2S_FER_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P07839-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMAMRSTFA ARVGAKPAVR GARPASRMSC MAYKVTLKTP SGDKTIECPA
60 70 80 90 100
DTYILDAAEE AGLDLPYSCR AGACSSCAGK VAAGTVDQSD QSFLDDAQMG
110 120
NGFVLTCVAY PTSDCTIQTH QEEALY
Length:126
Mass (Da):13,232
Last modified:February 1, 1994 - v2
Checksum:i155AFEA9E6F6E411
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29516 Genomic DNA Translation: AAC49171.1
L10349 mRNA Translation: AAA33085.1
PIRiT08054 FEKM
RefSeqiXP_001692808.1, XM_001692756.1
UniGeneiCre.8738

Genome annotation databases

EnsemblPlantsiEDP03827; EDP03827; CHLREDRAFT_147787
GeneIDi5718285
GrameneiEDP03827; EDP03827; CHLREDRAFT_147787
KEGGicre:CHLREDRAFT_147787

Similar proteinsi

Entry informationi

Entry nameiFER_CHLRE
AccessioniPrimary (citable) accession number: P07839
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 1, 1988
Last sequence update: February 1, 1994
Last modified: March 28, 2018
This is version 129 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing
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Main funding by: National Institutes of Health