Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Myelin-associated glycoprotein

Gene

Mag

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Adhesion molecule in postnatal neural development that mediates sialic-acid dependent cell-cell interactions between neuronal and myelinating cells. Preferentially binds to alpha-2,3-linked sialic acid (By similarity).By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei118Sialic acidBy similarity1

GO - Molecular functioni

  • carbohydrate binding Source: UniProtKB-KW
  • protein kinase binding Source: RGD
  • receptor binding Source: RGD

GO - Biological processi

  • cell adhesion Source: UniProtKB-KW
  • cellular response to mechanical stimulus Source: RGD
  • negative regulation of neuron differentiation Source: RGD
  • negative regulation of neuron projection development Source: RGD
  • nervous system development Source: RGD
  • positive regulation of astrocyte differentiation Source: RGD
  • positive regulation of myelination Source: Ensembl
Complete GO annotation...

Keywords - Biological processi

Cell adhesion

Keywords - Ligandi

Lectin

Enzyme and pathway databases

ReactomeiR-RNO-193634. Axonal growth inhibition (RHOA activation).
R-RNO-210991. Basigin interactions.

Names & Taxonomyi

Protein namesi
Recommended name:
Myelin-associated glycoprotein
Alternative name(s):
Brain neuron cytoplasmic protein 3
Sialic acid-binding Ig-like lectin 4a
Short name:
Siglec-4a
Gene namesi
Name:Mag
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi3035. Mag.

Subcellular locationi

  • Cell membrane By similarity; Single-pass type I membrane protein By similarity

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini20 – 516ExtracellularSequence analysisAdd BLAST497
Transmembranei517 – 536HelicalSequence analysisAdd BLAST20
Topological domaini537 – 626CytoplasmicSequence analysisAdd BLAST90

GO - Cellular componenti

  • cytoplasm Source: RGD
  • integral component of membrane Source: UniProtKB-KW
  • mesaxon Source: RGD
  • myelin sheath adaxonal region Source: RGD
  • paranode region of axon Source: Ensembl
  • plasma membrane Source: RGD
  • Schmidt-Lanterman incisure Source: RGD
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Add BLAST19
ChainiPRO_000001485820 – 626Myelin-associated glycoproteinAdd BLAST607

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi37 ↔ 1651 Publication
Disulfide bondi42 ↔ 1001 Publication
Glycosylationi99N-linked (GlcNAc...)Sequence analysis1
Disulfide bondi159 ↔ 2171 Publication
Glycosylationi223N-linked (GlcNAc...)Sequence analysis1
Glycosylationi246N-linked (GlcNAc...)Sequence analysis1
Disulfide bondi261 ↔ 3051 Publication
Glycosylationi315N-linked (GlcNAc...)Sequence analysis1
Glycosylationi332N-linked (GlcNAc...)Sequence analysis1
Disulfide bondi347 ↔ 3921 Publication
Glycosylationi406N-linked (GlcNAc...)Sequence analysis1
Disulfide bondi421 ↔ 4301 Publication
Disulfide bondi432 ↔ 4881 Publication
Glycosylationi450N-linked (GlcNAc...)Sequence analysis1
Glycosylationi454N-linked (GlcNAc...)Sequence analysis1
Lipidationi531S-palmitoyl cysteine1 Publication1
Modified residuei545PhosphoserineCombined sources1
Modified residuei547PhosphoserineCombined sources1
Modified residuei549PhosphoserineCombined sources1

Post-translational modificationi

N-glycosylated.By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein, Lipoprotein, Palmitate, Phosphoprotein

Proteomic databases

PaxDbiP07722.
PRIDEiP07722.

PTM databases

iPTMnetiP07722.
PhosphoSitePlusiP07722.

Expressioni

Gene expression databases

BgeeiENSRNOG00000021023.
ExpressionAtlasiP07722. baseline and differential.
GenevisibleiP07722. RN.

Interactioni

Subunit structurei

Binds to RTN4R.By similarity

GO - Molecular functioni

  • protein kinase binding Source: RGD
  • receptor binding Source: RGD

Protein-protein interaction databases

BioGridi248059. 1 interactor.
MINTiMINT-237515.
STRINGi10116.ENSRNOP00000028544.

Structurei

3D structure databases

ProteinModelPortaliP07722.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 120Ig-like V-typeAdd BLAST99
Domaini139 – 237Ig-like C2-type 1Add BLAST99
Domaini241 – 325Ig-like C2-type 2Add BLAST85
Domaini327 – 412Ig-like C2-type 3Add BLAST86
Domaini413 – 508Ig-like C2-type 4Add BLAST96

Sequence similaritiesi

Keywords - Domaini

Immunoglobulin domain, Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IUGJ. Eukaryota.
ENOG410XQVV. LUCA.
GeneTreeiENSGT00760000119139.
HOGENOMiHOG000113464.
HOVERGENiHBG006317.
InParanoidiP07722.
KOiK06771.
OMAiCQASFPN.
OrthoDBiEOG091G03Q5.
PhylomeDBiP07722.
TreeFamiTF332441.

Family and domain databases

Gene3Di2.60.40.10. 4 hits.
InterProiIPR013162. CD80_C2-set.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR003598. Ig_sub2.
[Graphical view]
PfamiPF08205. C2-set_2. 1 hit.
[Graphical view]
SMARTiSM00409. IG. 4 hits.
SM00408. IGc2. 2 hits.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 4 hits.
PROSITEiPS50835. IG_LIKE. 2 hits.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform L-MAG (identifier: P07722-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MIFLTTLPLF WIMISASRGG HWGAWMPSSI SAFEGTCVSI PCRFDFPDEL
60 70 80 90 100
RPAVVHGVWY FNSPYPKNYP PVVFKSRTQV VHESFQGRSR LLGDLGLRNC
110 120 130 140 150
TLLLSTLSPE LGGKYYFRGD LGGYNQYTFS EHSVLDIINT PNIVVPPEVV
160 170 180 190 200
AGTEVEVSCM VPDNCPELRP ELSWLGHEGL GEPTVLGRLR EDEGTWVQVS
210 220 230 240 250
LLHFVPTREA NGHRLGCQAA FPNTTLQFEG YASLDVKYPP VIVEMNSSVE
260 270 280 290 300
AIEGSHVSLL CGADSNPPPL LTWMRDGMVL REAVAESLYL DLEEVTPAED
310 320 330 340 350
GIYACLAENA YGQDNRTVEL SVMYAPWKPT VNGTVVAVEG ETVSILCSTQ
360 370 380 390 400
SNPDPILTIF KEKQILATVI YESQLQLELP AVTPEDDGEY WCVAENQYGQ
410 420 430 440 450
RATAFNLSVE FAPIILLESH CAAARDTVQC LCVVKSNPEP SVAFELPSRN
460 470 480 490 500
VTVNETEREF VYSERSGLLL TSILTLRGQA QAPPRVICTS RNLYGTQSLE
510 520 530 540 550
LPFQGAHRLM WAKIGPVGAV VAFAILIAIV CYITQTRRKK NVTESPSFSA
560 570 580 590 600
GDNPHVLYSP EFRISGAPDK YESEKRLGSE RRLLGLRGEP PELDLSYSHS
610 620
DLGKRPTKDS YTLTEELAEY AEIRVK
Length:626
Mass (Da):69,353
Last modified:April 1, 1988 - v1
Checksum:iE97998E280ECD635
GO
Isoform S-MAG (identifier: P07722-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     574-582: EKRLGSERR → REVSTRDCH
     583-626: Missing.

Show »
Length:582
Mass (Da):64,351
Checksum:i2A7A9A9FF76D48C4
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti309 – 310NA → KS (PubMed:6586369).Curated2
Sequence conflicti309 – 310NA → KS (PubMed:4020419).Curated2
Sequence conflicti309 – 310NA → KS (PubMed:6347394).Curated2

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_002529574 – 582EKRLGSERR → REVSTRDCH in isoform S-MAG. 1 Publication9
Alternative sequenceiVSP_002530583 – 626Missing in isoform S-MAG. 1 PublicationAdd BLAST44

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M14871 mRNA. Translation: AAA41556.1.
M22357 mRNA. Translation: AAA41558.1.
M16800 mRNA. Translation: AAA41557.1.
X05301 mRNA. Translation: CAA28920.1.
M11721 mRNA. Translation: AAA42082.1.
M36702 mRNA. Translation: AAA40831.1.
V01544 Genomic DNA. Translation: CAA24786.1.
PIRiA29028. BNRT3.
RefSeqiNP_058886.1. NM_017190.4. [P07722-1]
XP_006228886.1. XM_006228824.3. [P07722-1]
XP_008757360.1. XM_008759138.2. [P07722-1]
XP_017444540.1. XM_017589051.1. [P07722-1]
XP_017444541.1. XM_017589052.1. [P07722-1]
XP_017444542.1. XM_017589053.1. [P07722-1]
UniGeneiRn.87331.

Genome annotation databases

EnsembliENSRNOT00000028544; ENSRNOP00000028544; ENSRNOG00000021023. [P07722-1]
GeneIDi29409.
KEGGirno:29409.
UCSCiRGD:3035. rat. [P07722-1]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M14871 mRNA. Translation: AAA41556.1.
M22357 mRNA. Translation: AAA41558.1.
M16800 mRNA. Translation: AAA41557.1.
X05301 mRNA. Translation: CAA28920.1.
M11721 mRNA. Translation: AAA42082.1.
M36702 mRNA. Translation: AAA40831.1.
V01544 Genomic DNA. Translation: CAA24786.1.
PIRiA29028. BNRT3.
RefSeqiNP_058886.1. NM_017190.4. [P07722-1]
XP_006228886.1. XM_006228824.3. [P07722-1]
XP_008757360.1. XM_008759138.2. [P07722-1]
XP_017444540.1. XM_017589051.1. [P07722-1]
XP_017444541.1. XM_017589052.1. [P07722-1]
XP_017444542.1. XM_017589053.1. [P07722-1]
UniGeneiRn.87331.

3D structure databases

ProteinModelPortaliP07722.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi248059. 1 interactor.
MINTiMINT-237515.
STRINGi10116.ENSRNOP00000028544.

PTM databases

iPTMnetiP07722.
PhosphoSitePlusiP07722.

Proteomic databases

PaxDbiP07722.
PRIDEiP07722.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000028544; ENSRNOP00000028544; ENSRNOG00000021023. [P07722-1]
GeneIDi29409.
KEGGirno:29409.
UCSCiRGD:3035. rat. [P07722-1]

Organism-specific databases

CTDi4099.
RGDi3035. Mag.

Phylogenomic databases

eggNOGiENOG410IUGJ. Eukaryota.
ENOG410XQVV. LUCA.
GeneTreeiENSGT00760000119139.
HOGENOMiHOG000113464.
HOVERGENiHBG006317.
InParanoidiP07722.
KOiK06771.
OMAiCQASFPN.
OrthoDBiEOG091G03Q5.
PhylomeDBiP07722.
TreeFamiTF332441.

Enzyme and pathway databases

ReactomeiR-RNO-193634. Axonal growth inhibition (RHOA activation).
R-RNO-210991. Basigin interactions.

Miscellaneous databases

PROiP07722.

Gene expression databases

BgeeiENSRNOG00000021023.
ExpressionAtlasiP07722. baseline and differential.
GenevisibleiP07722. RN.

Family and domain databases

Gene3Di2.60.40.10. 4 hits.
InterProiIPR013162. CD80_C2-set.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR003598. Ig_sub2.
[Graphical view]
PfamiPF08205. C2-set_2. 1 hit.
[Graphical view]
SMARTiSM00409. IG. 4 hits.
SM00408. IGc2. 2 hits.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 4 hits.
PROSITEiPS50835. IG_LIKE. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMAG_RAT
AccessioniPrimary (citable) accession number: P07722
Secondary accession number(s): P02685, P07723
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: April 1, 1988
Last modified: November 30, 2016
This is version 145 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.