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Protein

Trypsin-1

Gene

PRSS1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Has activity against the synthetic substrates Boc-Phe-Ser-Arg-Mec, Boc-Leu-Thr-Arg-Mec, Boc-Gln-Ala-Arg-Mec and Boc-Val-Pro-Arg-Mec. The single-chain form is more active than the two-chain form against all of these substrates.1 Publication

Catalytic activityi

Preferential cleavage: Arg-|-Xaa, Lys-|-Xaa.

Cofactori

Ca2+Note: Binds 1 Ca2+ ion per subunit.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei63 – 631Charge relay system
Metal bindingi75 – 751Calcium
Metal bindingi77 – 771Calcium; via carbonyl oxygen
Metal bindingi80 – 801Calcium; via carbonyl oxygen
Metal bindingi85 – 851Calcium
Active sitei107 – 1071Charge relay system
Sitei194 – 1941Required for specificityBy similarity
Active sitei200 – 2001Charge relay system

GO - Molecular functioni

  • metal ion binding Source: UniProtKB-KW
  • serine-type endopeptidase activity Source: UniProtKB

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protease, Serine protease

Keywords - Biological processi

Digestion

Keywords - Ligandi

Calcium, Metal-binding

Enzyme and pathway databases

ReactomeiREACT_118682. Activation of Matrix Metalloproteinases.
REACT_163862. Cobalamin (Cbl, vitamin B12) transport and metabolism.

Protein family/group databases

MEROPSiS01.127.

Names & Taxonomyi

Protein namesi
Recommended name:
Trypsin-1 (EC:3.4.21.4)
Alternative name(s):
Beta-trypsin
Cationic trypsinogen
Serine protease 1
Trypsin I
Cleaved into the following 2 chains:
Gene namesi
Name:PRSS1
Synonyms:TRP1, TRY1, TRYP1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componentsi: Chromosome 7, Unplaced

Organism-specific databases

HGNCiHGNC:9475. PRSS1.

Subcellular locationi

GO - Cellular componenti

  • blood microparticle Source: UniProtKB
  • extracellular exosome Source: UniProtKB
  • extracellular region Source: UniProtKB
  • extracellular space Source: GO_Central
Complete GO annotation...

Keywords - Cellular componenti

Secreted

Pathology & Biotechi

Involvement in diseasei

Pancreatitis, hereditary (PCTT)11 Publications

Disease susceptibility is associated with variations affecting the gene represented in this entry.

Disease descriptionA disease characterized by pancreas inflammation, permanent destruction of the pancreatic parenchyma, maldigestion, and severe abdominal pain attacks.

See also OMIM:167800
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti16 – 161A → V in PCTT; disrupts signal sequence cleavage site. 1 Publication
VAR_011693
Natural varianti22 – 221D → G in PCTT; increased rate of activation. 1 Publication
VAR_011652
Natural varianti23 – 231K → R in PCTT; increased rate of activation. 1 Publication
VAR_011653
Natural varianti29 – 291N → I in PCTT. 4 Publications
VAR_006720
Natural varianti29 – 291N → T in PCTT. 1 Publication
VAR_012712
Natural varianti54 – 541N → S in PCTT; associated with Ile-29; the double mutant shows increased autocatalytic activation which is solely due to the Ile-29 mutation. 1 Publication
VAR_037908
Natural varianti79 – 791E → K in PCTT; Lys-79 trypsin activates anionic trypsinogen PRSS2 2-fold while the common pancreatitis-associated mutants His-122 or Ile-29 have no such effect. 1 Publication
Corresponds to variant rs28934902 [ dbSNP | Ensembl ].
VAR_037909
Natural varianti104 – 1041L → P in PCTT. 1 Publication
VAR_011654
Natural varianti116 – 1161R → C in PCTT. 1 Publication
VAR_011655
Natural varianti122 – 1221R → C in PCTT; suppresses an autocleavage site. 1 Publication
VAR_012713
Natural varianti122 – 1221R → H in PCTT; suppresses an autocleavage site which is probably part of a fail-safe mechanism by which trypsin, which is activated within the pancreas, may be inactivated; loss of this cleavage site would permit autodigestion resulting in pancreatitis. 5 Publications
VAR_006721
Natural varianti139 – 1391C → F in PCTT. 1 Publication
VAR_011656

Mutagenesis

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Mutagenesisi154 – 1541Y → F: Lack of sulfation. 1 Publication

Keywords - Diseasei

Disease mutation

Organism-specific databases

MIMi167800. phenotype.
Orphaneti676. Hereditary chronic pancreatitis.
PharmGKBiPA33828.

Chemistry

DrugBankiDB06692. Aprotinin.

Polymorphism and mutation databases

BioMutaiPRSS1.
DMDMi136408.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 15152 PublicationsAdd
BLAST
Propeptidei16 – 238Activation peptidePRO_0000028197
Chaini24 – 247224Trypsin-1PRO_0000028198Add
BLAST
Chaini24 – 12299Alpha-trypsin chain 1PRO_0000313570Add
BLAST
Chaini123 – 247125Alpha-trypsin chain 2PRO_0000313571Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi30 ↔ 160
Disulfide bondi48 ↔ 64
Disulfide bondi139 ↔ 206
Modified residuei154 – 1541Sulfotyrosine2 Publications
Disulfide bondi171 ↔ 185
Disulfide bondi196 ↔ 220

Post-translational modificationi

Occurs in a single-chain form and a two-chain form, produced by proteolytic cleavage after Arg-122.
Sulfation at Tyr-154 increases selectivity towards basic versus apolar residues at the P2' position of inhibitors that bind in a substrate-like fashion. Although the increase in selectivity is relatively small, it may facilitate digestion of a broader range of dietary proteins.1 Publication

Keywords - PTMi

Disulfide bond, Sulfation, Zymogen

Proteomic databases

MaxQBiP07477.
PaxDbiP07477.
PeptideAtlasiP07477.
PRIDEiP07477.

PTM databases

PhosphoSiteiP07477.

Miscellaneous databases

PMAP-CutDBP07477.

Expressioni

Gene expression databases

BgeeiP07477.
ExpressionAtlasiP07477. baseline and differential.
GenevisibleiP07477. HS.

Organism-specific databases

HPAiCAB025487.
CAB025538.
HPA062452.
HPA063471.

Interactioni

Protein-protein interaction databases

BioGridi111626. 7 interactions.
IntActiP07477. 4 interactions.

Structurei

Secondary structure

1
247
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi38 – 5417Combined sources
Beta strandi57 – 604Combined sources
Helixi62 – 643Combined sources
Beta strandi70 – 745Combined sources
Beta strandi76 – 805Combined sources
Beta strandi86 – 9510Combined sources
Turni101 – 1033Combined sources
Beta strandi109 – 1157Combined sources
Beta strandi120 – 1223Combined sources
Beta strandi138 – 1447Combined sources
Beta strandi149 – 1513Combined sources
Beta strandi159 – 1657Combined sources
Helixi168 – 1747Combined sources
Turni176 – 1783Combined sources
Beta strandi183 – 1875Combined sources
Beta strandi192 – 1943Combined sources
Beta strandi203 – 2064Combined sources
Beta strandi209 – 2168Combined sources
Beta strandi218 – 2225Combined sources
Beta strandi227 – 2315Combined sources
Helixi232 – 2354Combined sources
Helixi236 – 24510Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1FXYX-ray2.15A127-247[»]
1TRNX-ray2.20A/B24-247[»]
2RA3X-ray1.46A/B24-247[»]
ProteinModelPortaliP07477.
SMRiP07477. Positions 24-247.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP07477.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini24 – 244221Peptidase S1PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the peptidase S1 family.PROSITE-ProRule annotation
Contains 1 peptidase S1 domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG5640.
GeneTreeiENSGT00760000118862.
HOVERGENiHBG013304.
InParanoidiP07477.
KOiK01312.
PhylomeDBiP07477.
TreeFamiTF331065.

Family and domain databases

InterProiIPR001254. Peptidase_S1.
IPR018114. Peptidase_S1_AS.
IPR001314. Peptidase_S1A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view]
PfamiPF00089. Trypsin. 1 hit.
[Graphical view]
PRINTSiPR00722. CHYMOTRYPSIN.
SMARTiSM00020. Tryp_SPc. 1 hit.
[Graphical view]
SUPFAMiSSF50494. SSF50494. 1 hit.
PROSITEiPS50240. TRYPSIN_DOM. 1 hit.
PS00134. TRYPSIN_HIS. 1 hit.
PS00135. TRYPSIN_SER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P07477-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNPLLILTFV AAALAAPFDD DDKIVGGYNC EENSVPYQVS LNSGYHFCGG
60 70 80 90 100
SLINEQWVVS AGHCYKSRIQ VRLGEHNIEV LEGNEQFINA AKIIRHPQYD
110 120 130 140 150
RKTLNNDIML IKLSSRAVIN ARVSTISLPT APPATGTKCL ISGWGNTASS
160 170 180 190 200
GADYPDELQC LDAPVLSQAK CEASYPGKIT SNMFCVGFLE GGKDSCQGDS
210 220 230 240
GGPVVCNGQL QGVVSWGDGC AQKNKPGVYT KVYNYVKWIK NTIAANS
Length:247
Mass (Da):26,558
Last modified:April 1, 1988 - v1
Checksum:iDD49A487B8062813
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti4 – 41L → F in AAI28227 (PubMed:15489334).Curated

Mass spectrometryi

Molecular mass is 24348±2 Da from positions 24 - 247. Determined by ESI. 1 Publication

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti16 – 161A → V in PCTT; disrupts signal sequence cleavage site. 1 Publication
VAR_011693
Natural varianti22 – 221D → G in PCTT; increased rate of activation. 1 Publication
VAR_011652
Natural varianti23 – 231K → R in PCTT; increased rate of activation. 1 Publication
VAR_011653
Natural varianti29 – 291N → I in PCTT. 4 Publications
VAR_006720
Natural varianti29 – 291N → T in PCTT. 1 Publication
VAR_012712
Natural varianti54 – 541N → S in PCTT; associated with Ile-29; the double mutant shows increased autocatalytic activation which is solely due to the Ile-29 mutation. 1 Publication
VAR_037908
Natural varianti79 – 791E → K in PCTT; Lys-79 trypsin activates anionic trypsinogen PRSS2 2-fold while the common pancreatitis-associated mutants His-122 or Ile-29 have no such effect. 1 Publication
Corresponds to variant rs28934902 [ dbSNP | Ensembl ].
VAR_037909
Natural varianti104 – 1041L → P in PCTT. 1 Publication
VAR_011654
Natural varianti116 – 1161R → C in PCTT. 1 Publication
VAR_011655
Natural varianti122 – 1221R → C in PCTT; suppresses an autocleavage site. 1 Publication
VAR_012713
Natural varianti122 – 1221R → H in PCTT; suppresses an autocleavage site which is probably part of a fail-safe mechanism by which trypsin, which is activated within the pancreas, may be inactivated; loss of this cleavage site would permit autodigestion resulting in pancreatitis. 5 Publications
VAR_006721
Natural varianti137 – 1371T → M in a colorectal cancer sample; somatic mutation. 1 Publication
VAR_036299
Natural varianti139 – 1391C → F in PCTT. 1 Publication
VAR_011656

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M22612 mRNA. Translation: AAA61231.1.
L36092 Genomic DNA. Translation: AAC80207.1.
AK312199 mRNA. Translation: BAG35132.1.
AC231380 Genomic DNA. No translation available.
CH236959 Genomic DNA. Translation: EAL23773.1.
CH471198 Genomic DNA. Translation: EAW51925.1.
BC128226 mRNA. Translation: AAI28227.1.
AF314534 Genomic DNA. Translation: AAG30943.1.
U70137 Genomic DNA. Translation: AAC50728.1.
AF315309 Genomic DNA. Translation: AAG30947.1.
AF315310 Genomic DNA. Translation: AAG30948.1.
AF315311 Genomic DNA. Translation: AAG30949.1.
CCDSiCCDS5872.1.
PIRiA25852.
S50020.
S50021.
RefSeqiNP_002760.1. NM_002769.4.
UniGeneiHs.382212.
Hs.449281.

Genome annotation databases

EnsembliENST00000311737; ENSP00000308720; ENSG00000204983.
ENST00000616256; ENSP00000479217; ENSG00000274247.
GeneIDi5644.
KEGGihsa:5644.
UCSCiuc003wak.2. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M22612 mRNA. Translation: AAA61231.1.
L36092 Genomic DNA. Translation: AAC80207.1.
AK312199 mRNA. Translation: BAG35132.1.
AC231380 Genomic DNA. No translation available.
CH236959 Genomic DNA. Translation: EAL23773.1.
CH471198 Genomic DNA. Translation: EAW51925.1.
BC128226 mRNA. Translation: AAI28227.1.
AF314534 Genomic DNA. Translation: AAG30943.1.
U70137 Genomic DNA. Translation: AAC50728.1.
AF315309 Genomic DNA. Translation: AAG30947.1.
AF315310 Genomic DNA. Translation: AAG30948.1.
AF315311 Genomic DNA. Translation: AAG30949.1.
CCDSiCCDS5872.1.
PIRiA25852.
S50020.
S50021.
RefSeqiNP_002760.1. NM_002769.4.
UniGeneiHs.382212.
Hs.449281.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1FXYX-ray2.15A127-247[»]
1TRNX-ray2.20A/B24-247[»]
2RA3X-ray1.46A/B24-247[»]
ProteinModelPortaliP07477.
SMRiP07477. Positions 24-247.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi111626. 7 interactions.
IntActiP07477. 4 interactions.

Chemistry

BindingDBiP07477.
ChEMBLiCHEMBL2096988.
DrugBankiDB06692. Aprotinin.
GuidetoPHARMACOLOGYi2397.

Protein family/group databases

MEROPSiS01.127.

PTM databases

PhosphoSiteiP07477.

Polymorphism and mutation databases

BioMutaiPRSS1.
DMDMi136408.

Proteomic databases

MaxQBiP07477.
PaxDbiP07477.
PeptideAtlasiP07477.
PRIDEiP07477.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000311737; ENSP00000308720; ENSG00000204983.
ENST00000616256; ENSP00000479217; ENSG00000274247.
GeneIDi5644.
KEGGihsa:5644.
UCSCiuc003wak.2. human.

Organism-specific databases

CTDi5644.
GeneCardsiGC07P142773.
GeneReviewsiPRSS1.
HGNCiHGNC:9475. PRSS1.
HPAiCAB025487.
CAB025538.
HPA062452.
HPA063471.
MIMi167800. phenotype.
276000. gene.
neXtProtiNX_P07477.
Orphaneti676. Hereditary chronic pancreatitis.
PharmGKBiPA33828.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiCOG5640.
GeneTreeiENSGT00760000118862.
HOVERGENiHBG013304.
InParanoidiP07477.
KOiK01312.
PhylomeDBiP07477.
TreeFamiTF331065.

Enzyme and pathway databases

ReactomeiREACT_118682. Activation of Matrix Metalloproteinases.
REACT_163862. Cobalamin (Cbl, vitamin B12) transport and metabolism.

Miscellaneous databases

EvolutionaryTraceiP07477.
GeneWikiiTrypsin_1.
GenomeRNAii5644.
NextBioi21926.
PMAP-CutDBP07477.
PROiP07477.
SOURCEiSearch...

Gene expression databases

BgeeiP07477.
ExpressionAtlasiP07477. baseline and differential.
GenevisibleiP07477. HS.

Family and domain databases

InterProiIPR001254. Peptidase_S1.
IPR018114. Peptidase_S1_AS.
IPR001314. Peptidase_S1A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view]
PfamiPF00089. Trypsin. 1 hit.
[Graphical view]
PRINTSiPR00722. CHYMOTRYPSIN.
SMARTiSM00020. Tryp_SPc. 1 hit.
[Graphical view]
SUPFAMiSSF50494. SSF50494. 1 hit.
PROSITEiPS50240. TRYPSIN_DOM. 1 hit.
PS00134. TRYPSIN_HIS. 1 hit.
PS00135. TRYPSIN_SER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning, characterization and nucleotide sequences of two cDNAs encoding human pancreatic trypsinogens."
    Emi M., Nakamura Y., Ogawa M., Yamamoto T., Nishide T., Mori T., Matsubara K.
    Gene 41:305-310(1986) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "The complete 685-kilobase DNA sequence of the human beta T cell receptor locus."
    Rowen L., Koop B.F., Hood L.
    Science 272:1755-1762(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  3. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Prostate.
  4. "The DNA sequence of human chromosome 7."
    Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L.
    , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
    Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  5. "Human chromosome 7: DNA sequence and biology."
    Scherer S.W., Cheung J., MacDonald J.R., Osborne L.R., Nakabayashi K., Herbrick J.-A., Carson A.R., Parker-Katiraee L., Skaug J., Khaja R., Zhang J., Hudek A.K., Li M., Haddad M., Duggan G.E., Fernandez B.A., Kanematsu E., Gentles S.
    , Christopoulos C.C., Choufani S., Kwasnicka D., Zheng X.H., Lai Z., Nusskern D.R., Zhang Q., Gu Z., Lu F., Zeesman S., Nowaczyk M.J., Teshima I., Chitayat D., Shuman C., Weksberg R., Zackai E.H., Grebe T.A., Cox S.R., Kirkpatrick S.J., Rahman N., Friedman J.M., Heng H.H.Q., Pelicci P.G., Lo-Coco F., Belloni E., Shaffer L.G., Pober B., Morton C.C., Gusella J.F., Bruns G.A.P., Korf B.R., Quade B.J., Ligon A.H., Ferguson H., Higgins A.W., Leach N.T., Herrick S.R., Lemyre E., Farra C.G., Kim H.-G., Summers A.M., Gripp K.W., Roberts W., Szatmari P., Winsor E.J.T., Grzeschik K.-H., Teebi A., Minassian B.A., Kere J., Armengol L., Pujana M.A., Estivill X., Wilson M.D., Koop B.F., Tosi S., Moore G.E., Boright A.P., Zlotorynski E., Kerem B., Kroisel P.M., Petek E., Oscier D.G., Mould S.J., Doehner H., Doehner K., Rommens J.M., Vincent J.B., Venter J.C., Li P.W., Mural R.J., Adams M.D., Tsui L.-C.
    Science 300:767-772(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  6. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  7. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  8. "Chronic pancreatitis associated with an activation peptide mutation that facilitates trypsin activation."
    Teich N., Ockenga J., Hoffmeister A., Manns M., Mossner J., Keim V.
    Gastroenterology 119:461-465(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 15-67, VARIANT PCTT GLY-22.
  9. "Identification of one- and two-chain forms of trypsinogen 1 produced by a human gastric adenocarcinoma cell line."
    Koshikawa N., Yasumitsu H., Nagashima Y., Umeda M., Miyazaki K.
    Biochem. J. 303:187-190(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 16-43 AND 123-142, FUNCTION, POST-TRANSLATIONAL PROCESSING.
    Tissue: Gastric adenocarcinoma.
  10. "Immunoreactive anionic and cationic trypsin in human serum."
    Kimland M., Russick C., Marks W.H., Borgstroem A.
    Clin. Chim. Acta 184:31-46(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 16-43.
  11. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 68-151, VARIANT PCTT HIS-122.
  12. "Mutational screening of patients with nonalcoholic chronic pancreatitis: identification of further trypsinogen variants."
    Teich N., Bauer N., Mossner J., Keim V.
    Am. J. Gastroenterol. 97:341-346(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 68-151, VARIANTS PCTT ILE-29; PRO-104; CYS-116; HIS-122 AND PHE-139.
  13. Lubec G., Afjehi-Sadat L.
    Submitted (MAR-2007) to UniProtKB
    Cited for: PROTEIN SEQUENCE OF 73-92, IDENTIFICATION BY MASS SPECTROMETRY.
    Tissue: Brain and Cajal-Retzius cell.
  14. "Human cationic trypsinogen is sulfated on Tyr154."
    Sahin-Toth M., Kukor Z., Nemoda Z.
    FEBS J. 273:5044-5050(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SULFATION AT TYR-154, MUTAGENESIS OF TYR-154.
  15. "Tyrosine sulfation of human trypsin steers S2' subsite selectivity towards basic amino acids."
    Szabo A., Salameh M.A., Ludwig M., Radisky E.S., Sahin-Toth M.
    PLoS ONE 9:E102063-E102063(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: SULFATION AT TYR-154.
  16. "Crystal structure of human trypsin 1: unexpected phosphorylation of Tyr151."
    Gaboriaud C., Serre L., Guy-Crotte O., Forest E., Fontecilla-Camps J.-C.
    J. Mol. Biol. 259:995-1010(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.2 ANGSTROMS), MASS SPECTROMETRY.
  17. "Mutations in the cationic trypsinogen gene are associated with recurrent acute and chronic pancreatitis."
    Gorry M.C., Gabbaizedeh D., Furey W., Gates L.K. Jr., Preston R.A., Aston C.E., Zhang Y., Ulrich C., Ehrlich G.D., Whitcomb D.C.
    Gastroenterology 113:1063-1068(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: VARIANTS PCTT ILE-29 AND HIS-122.
  18. "Mutations of the cationic trypsinogen in hereditary pancreatitis."
    Teich N., Mossner J., Keim V.
    Hum. Mutat. 12:39-43(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: VARIANT PCTT ILE-29.
  19. "A signal peptide cleavage site mutation in the cationic trypsinogen gene is strongly associated with chronic pancreatitis."
    Witt H., Luck W., Becker M.
    Gastroenterology 117:7-10(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: VARIANTS PCTT VAL-16 AND HIS-122.
  20. "Mutations in the cationic trypsinogen gene and evidence for genetic heterogeneity in hereditary pancreatitis."
    Ferec C., Raguenes O., Salomon R., Roche C., Bernard J.P., Guillot M., Quere I., Faure C., Mercier B., Audrezet M.-P., Guillausseau P.J., Dupont C., Munnich A., Bignon J.D., Le Bodic L.
    J. Med. Genet. 36:228-232(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: VARIANT PCTT ARG-23.
  21. "A CGC>CAT gene conversion-like event resulting in the R122H mutation in the cationic trypsinogen gene and its implication in the genotyping of pancreatitis."
    Chen J.-M., Raguenes O., Ferec C., Deprez P.H., Verellen-Dumoulin C.
    J. Med. Genet. 37:E36-E36(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: VARIANT PCTT HIS-122.
  22. "Novel cationic trypsinogen (PRSS1) N29T and R122C mutations cause autosomal dominant hereditary pancreatitis."
    Pfutzer R., Myers E., Applebaum-Shapiro S., Finch R., Ellis I., Neoptolemos J., Kant J.A., Whitcomb D.C.
    Gut 50:271-272(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: VARIANTS PCTT THR-29 AND CYS-122.
  23. "Interaction between trypsinogen isoforms in genetically determined pancreatitis: mutation E79K in cationic trypsin (PRSS1) causes increased transactivation of anionic trypsinogen (PRSS2)."
    Teich N., Le Marechal C., Kukor Z., Caca K., Witzigmann H., Chen J.-M., Toth M., Moessner J., Keim V., Ferec C., Sahin-Toth M.
    Hum. Mutat. 23:22-31(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: VARIANT PCTT LYS-79, CHARACTERIZATION OF VARIANT PCTT LYS-79.
  24. "Gene conversion between functional trypsinogen genes PRSS1 and PRSS2 associated with chronic pancreatitis in a six-year-old girl."
    Teich N., Nemoda Z., Koehler H., Heinritz W., Moessner J., Keim V., Sahin-Toth M.
    Hum. Mutat. 25:343-347(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: VARIANTS PCTT ILE-29 AND SER-54, CHARACTERIZATION OF VARIANTS PCTT ILE-29 AND SER-54.
  25. Cited for: VARIANT [LARGE SCALE ANALYSIS] MET-137.

Entry informationi

Entry nameiTRY1_HUMAN
AccessioniPrimary (citable) accession number: P07477
Secondary accession number(s): A1A509
, A6NJ71, B2R5I5, Q5NV57, Q7M4N3, Q7M4N4, Q92955, Q9HAN4, Q9HAN5, Q9HAN6, Q9HAN7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 1, 1988
Last sequence update: April 1, 1988
Last modified: June 24, 2015
This is version 173 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Tyr-154 was proposed to be phosphorylated (PubMed:8683601) but it has been shown (PubMed:17087724) to be sulfated instead. Phosphate and sulfate groups are similar in mass and size, and this can lead to erroneous interpretation of the results.2 Publications

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Human chromosome 7
    Human chromosome 7: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  6. Peptidase families
    Classification of peptidase families and list of entries
  7. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.