Reviewed, UniProtKB/Swiss-Prot P07252 (CBP1_YEAST)

Names and origin

Protein names

Recommended name:
    Cytochrome B pre-mRNA-processing protein 1

Gene names

Name:	CBP1
Ordered Locus Names:	YJL209W
ORF Names:	J0242, HRA654

Organism

Saccharomyces cerevisiae (Baker's yeast) [Complete proteome]

Taxonomic identifier

4932 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces

Protein attributes

Sequence length	654 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Function	Responsible for conferring a stable 5'-end on cytochrome b mRNA.
Miscellaneous	Present with 2180 molecules/cell in log phase SD medium. Ref.5

Ontologies

Keywords
Biological process	mRNA processing
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	aerobic respiration Inferred from mutant phenotype. Source: SGD mRNA processing Inferred from electronic annotation. Source: UniProtKB-KW mitochondrial mRNA catabolic process Inferred from mutant phenotype. Source: SGD
Cellular component	extrinsic to mitochondrial inner membrane Inferred from direct assay. Source: SGD
Molecular function	mRNA binding Inferred from genetic interaction. Source: SGD
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 654	654	Cytochrome B pre-mRNA-processing protein 1		PRO_0000089378

Sequences

	Sequence		Length	Mass (Da)
	P07252-1 [UniParc]. Last modified April 1, 1988. Version 1. Checksum: 2453B03280E1C44D	FASTA	654	76,172
	10 20 30 40 50 60 MFLPRLVRYR TERFIKMVPT RTLRRINHSS RDPIQKQVLA LIKANANLND NDKLKIRKYW 70 80 90 100 110 120 SDMADYKSLR KQENSLLESS ILHEVKIEDF ISFINRTKTS SMTTRGIYRR ECLYQCKKNL 130 140 150 160 170 180 DLVNQVVSQV SSVRHQKPLT TQLDTMRWCV DDAIGTGDIV MAADLFLLYY RLFTDDKKLD 190 200 210 220 230 240 EQYAKKIISV LAYPNPLHDH VHLVKYLQLN SLFESITGGG IKLTRFQLET LSNKALGLSN 250 260 270 280 290 300 EAPQLCKAIL NKLMNINYSL TNDLKLRDDQ VLLAYKSIDE NYRRGNVASV YSIWNKIKEH 310 320 330 340 350 360 YVSISAHDSR IIYKVFKICT HNRAYRSICS EMFWQLTPEY YCNNPLILPA IIDFITKQDS 370 380 390 400 410 420 LTMAKELMQN INRYTLPENH HIVWLNKRCL SSLLRMHLKF NDSNGVDRVL KQITTNFRAL 430 440 450 460 470 480 SQENYQAIII HLFKTQNLDH IAKAVKLLDT IPPGQAMLAY GSIINEVVDW KLASKVKFTD 490 500 510 520 530 540 NLMALVNDLL TKAHDFDPDH RNSLWNVVSA LYIKKLCHYK KRDGKFVANA KKDIDLAKLL 550 560 570 580 590 600 YINAAKRSKT YWTKSNCNPF IASSPCDVKL KVNNQNRFTI LRNIALSALQ IGRTDIFLWA 610 620 630 640 650 CAELYQNGMT IEELKLDWNF ILKHQIRNSE FKTNKEIIQD IKKHGVSAVK RYLR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Assembly of the mitochondrial membrane system. Nucleotide sequence of a yeast nuclear gene (CBP1) involved in 5' end processing of cytochrome b pre-mRNA." Dieckmann C.L., Homison G., Tzagoloff A. J. Biol. Chem. 259:4732-4738(1984) [PubMed: 6325407] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"Sequence analysis of a 40.2 kb DNA fragment located near the left telomere of yeast chromosome X." Vandenbol M., Durand P., Bolle P.-A., Dion C., Portetelle D., Hilger F. Yeast 10:1657-1662(1994) [PubMed: 7725802] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 204508 / S288c.
[3]	"Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X." Galibert F., Alexandraki D., Baur A., Boles E., Chalwatzis N., Chuat J.-C., Coster F., Cziepluch C., de Haan M., Domdey H., Durand P., Entian K.-D., Gatius M., Goffeau A., Grivell L.A., Hennemann A., Herbert C.J., Heumann K. , Hilger F., Hollenberg C.P., Huang M.-E., Jacq C., Jauniaux J.-C., Katsoulou C., Kirchrath L., Kleine K., Kordes E., Koetter P., Liebl S., Louis E.J., Manus V., Mewes H.-W., Miosga T., Obermaier B., Perea J., Pohl T.M., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rasmussen S.W., Rose M., Rossau R., Schaaff-Gerstenschlaeger I., Smits P.H.M., Scarcez T., Soriano N., To Van D., Tzermia M., Van Broekhoven A., Vandenbol M., Wedler H., von Wettstein D., Wambutt R., Zagulski M., Zollner A., Karpfinger-Hartl L. EMBO J. 15:2031-2049(1996) [PubMed: 8641269] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204508 / S288c.
[4]	"Overproduction of yeast viruslike particles by strains deficient in a mitochondrial nuclease." Liu Y., Dieckmann C.L. Mol. Cell. Biol. 9:3323-3331(1989) [PubMed: 2552292] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 589-654.
[5]	"Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	K02647 Genomic DNA. Translation: AAA34474.1. Z34098 Genomic DNA. Translation: CAA84002.1. Z49484 Genomic DNA. Translation: CAA89506.1. M28067 Genomic DNA. Translation: AAA34456.1.
PIR	BVBYP1. S05829.
RefSeq	NP_012326.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	P07252.
Genome annotation databases
Ensembl	YJL209W; YJL209W; YJL209W; Saccharomyces cerevisiae. [Genome view]
GeneID	853221.
KEGG	sce:YJL209W.
NMPDR	fig|4932.3.peg.3289.
Organism-specific databases
CYGD	YJL209w.
SGD	S000003745. CBP1.
Phylogenomic databases
OMA	ESSILHE.
OrthoDB	EOG94TQR2.
Gene expression databases
ArrayExpress	P07252.
Genevestigator	P07252.
GermOnline	YJL209W. Saccharomyces cerevisiae.
Family and domain databases
ProtoNet	Search...
Other Resources
NextBio	973419.

Entry information

Entry name

CBP1_YEAST

Accession

Primary (citable) accession number: P07252

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 1, 1988
Last sequence update:	April 1, 1988
Last modified:	November 24, 2009
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

FPAP (Fungal Proteome Annotation Project)