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P07213

- TOM70_YEAST

UniProt

P07213 - TOM70_YEAST

Protein

Mitochondrial import receptor subunit TOM70

Gene

TOM70

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 164 (01 Oct 2014)
      Sequence version 2 (01 Oct 1996)
      Previous versions | rss
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    Functioni

    Component of the TOM (translocase of outer membrane) receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM20 and TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the TOM40 translocation pore.1 Publication

    GO - Molecular functioni

    1. mitochondrion targeting sequence binding Source: SGD
    2. P-P-bond-hydrolysis-driven protein transmembrane transporter activity Source: InterPro
    3. protein binding Source: IntAct

    GO - Biological processi

    1. protein import into mitochondrial inner membrane Source: SGD
    2. protein import into mitochondrial matrix Source: SGD
    3. protein targeting to mitochondrion Source: SGD

    Enzyme and pathway databases

    BioCyciYEAST:G3O-33142-MONOMER.
    ReactomeiREACT_189012. Mitochondrial protein import.

    Protein family/group databases

    TCDBi3.A.8.1.1. the mitochondrial protein translocase (mpt) family.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Mitochondrial import receptor subunit TOM70
    Alternative name(s):
    70 kDa mitochondrial outer membrane protein
    Translocase of outer membrane 70 kDa subunit
    Gene namesi
    Name:TOM70
    Synonyms:MAS70, OMP1
    Ordered Locus Names:YNL121C
    ORF Names:N1905
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome XIV

    Organism-specific databases

    CYGDiYNL121c.
    SGDiS000005065. TOM70.

    Subcellular locationi

    Mitochondrion outer membrane 1 Publication; Single-pass membrane protein 1 Publication

    GO - Cellular componenti

    1. integral component of mitochondrial outer membrane Source: SGD
    2. mitochondrial outer membrane Source: Reactome
    3. mitochondrial outer membrane translocase complex Source: SGD
    4. mitochondrion Source: SGD

    Keywords - Cellular componenti

    Membrane, Mitochondrion, Mitochondrion outer membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 617617Mitochondrial import receptor subunit TOM70PRO_0000106340Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei174 – 1741Phosphoserine1 Publication

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    MaxQBiP07213.
    PaxDbiP07213.
    PeptideAtlasiP07213.

    Expressioni

    Gene expression databases

    GenevestigatoriP07213.

    Interactioni

    Subunit structurei

    Forms part of the TOM (translocase of outer membrane) complex that consists of at least 7 different proteins (TOM5, TOM6, TOM7, TOM20, TOM22, TOM40 and TOM70). In the complex interacts with TOM22. Interacts with TOM37.2 Publications

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    BAXQ078122EBI-12551,EBI-516580From a different organism.

    Protein-protein interaction databases

    BioGridi35706. 157 interactions.
    DIPiDIP-2301N.
    IntActiP07213. 12 interactions.
    MINTiMINT-508943.
    STRINGi4932.YNL121C.

    Structurei

    Secondary structure

    1
    617
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi95 – 11117
    Helixi115 – 12814
    Helixi132 – 14514
    Helixi148 – 16114
    Helixi166 – 17813
    Helixi182 – 19413
    Beta strandi195 – 1973
    Helixi200 – 2023
    Helixi204 – 21916
    Helixi254 – 2618
    Helixi278 – 29013
    Helixi297 – 31519
    Turni316 – 3183
    Helixi323 – 34220
    Helixi346 – 35914
    Helixi363 – 37412
    Helixi382 – 3843
    Helixi385 – 3906
    Helixi398 – 40912
    Helixi415 – 42511
    Helixi432 – 4409
    Turni441 – 4455
    Helixi447 – 46014
    Helixi466 – 47712
    Helixi481 – 49616
    Beta strandi498 – 5003
    Helixi506 – 51611
    Helixi523 – 53715
    Helixi542 – 55413
    Helixi558 – 57114
    Helixi575 – 59420
    Helixi598 – 6058

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2GW1X-ray3.00A/B94-607[»]
    ProteinModelPortaliP07213.
    SMRiP07213. Positions 94-607.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP07213.

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 1010Mitochondrial intermembraneSequence Analysis
    Topological domaini31 – 617587CytoplasmicSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei11 – 3020HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Repeati99 – 13234TPR 1Add
    BLAST
    Repeati134 – 16532TPR 2Add
    BLAST
    Repeati281 – 31535TPR 3Add
    BLAST
    Repeati363 – 39634TPR 4Add
    BLAST
    Repeati397 – 43034TPR 5Add
    BLAST
    Repeati432 – 46433TPR 6Add
    BLAST
    Repeati465 – 49834TPR 7Add
    BLAST
    Repeati505 – 54137TPR 8Add
    BLAST
    Repeati542 – 57534TPR 9Add
    BLAST

    Sequence similaritiesi

    Belongs to the Tom70 family.Curated
    Contains 9 TPR repeats.PROSITE-ProRule annotation

    Keywords - Domaini

    Repeat, TPR repeat, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG290605.
    GeneTreeiENSGT00750000117222.
    KOiK17768.
    OMAiCILEAFQ.
    OrthoDBiEOG7R839F.

    Family and domain databases

    Gene3Di1.25.40.10. 3 hits.
    InterProiIPR005687. Tom70.
    IPR013026. TPR-contain_dom.
    IPR011990. TPR-like_helical.
    IPR001440. TPR_1.
    IPR019734. TPR_repeat.
    [Graphical view]
    PfamiPF00515. TPR_1. 2 hits.
    [Graphical view]
    SMARTiSM00028. TPR. 6 hits.
    [Graphical view]
    TIGRFAMsiTIGR00990. 3a0801s09. 1 hit.
    PROSITEiPS50005. TPR. 6 hits.
    PS50293. TPR_REGION. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P07213-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKSFITRNKT AILATVAATG TAIGAYYYYN QLQQQQQRGK KNTINKDEKK    50
    DTKDSQKETE GAKKSTAPSN PPIYPVSSNG EPDFSNKANF TAEEKDKYAL 100
    ALKDKGNQFF RNKKYDDAIK YYNWALELKE DPVFYSNLSA CYVSVGDLKK 150
    VVEMSTKALE LKPDYSKVLL RRASANEGLG KFADAMFDLS VLSLNGDFND 200
    ASIEPMLERN LNKQAMSKLK EKFGDIDTAT ATPTELSTQP AKERKDKQEN 250
    LPSVTSMASF FGIFKPELTF ANYDESNEAD KELMNGLSNL YKRSPESYDK 300
    ADESFTKAAR LFEEQLDKNN EDEKLKEKLA ISLEHTGIFK FLKNDPLGAH 350
    EDIKKAIELF PRVNSYIYMA LIMADRNDST EYYNYFDKAL KLDSNNSSVY 400
    YHRGQMNFIL QNYDQAGKDF DKAKELDPEN IFPYIQLACL AYRENKFDDC 450
    ETLFSEAKRK FPEAPEVPNF FAEILTDKND FDKALKQYDL AIELENKLDG 500
    IYVGIAPLVG KATLLTRNPT VENFIEATNL LEKASKLDPR SEQAKIGLAQ 550
    MKLQQEDIDE AITLFEESAD LARTMEEKLQ AITFAEAAKV QQRIRSDPVL 600
    AKKIQETLAK LREQGLM 617
    Length:617
    Mass (Da):70,123
    Last modified:October 1, 1996 - v2
    Checksum:i664B8FC32CCE39A2
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti185 – 1851A → R in CAA29085. (PubMed:6365533)Curated

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti30 – 301N → S in strain: SK1, V1-09, YJM339 and YJM627. 1 Publication
    Natural varianti68 – 681P → S in strain: V1-09 and YJM627. 1 Publication
    Natural varianti277 – 2771N → H in strain: YJM1129. 1 Publication
    Natural varianti359 – 3591L → S in strain: SK1. 1 Publication
    Natural varianti364 – 3641N → I in strain: YJM269 and YJM270. 1 Publication
    Natural varianti385 – 3851Y → H in strain: YJM1129. 1 Publication
    Natural varianti429 – 4291E → G in ytrain: V1-09. 1 Publication

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X05585 Genomic DNA. Translation: CAA29085.1.
    EF125216 Genomic DNA. Translation: ABN58537.1.
    EF125217 Genomic DNA. Translation: ABN58546.1.
    EF125218 Genomic DNA. Translation: ABN58555.1.
    EF125219 Genomic DNA. Translation: ABN58564.1.
    EF125220 Genomic DNA. Translation: ABN58573.1.
    EF125221 Genomic DNA. Translation: ABN58582.1.
    EF125222 Genomic DNA. Translation: ABN58591.1.
    EF125223 Genomic DNA. Translation: ABN58600.1.
    EF125224 Genomic DNA. Translation: ABN58609.1.
    EF125225 Genomic DNA. Translation: ABN58618.1.
    EF125226 Genomic DNA. Translation: ABN58627.1.
    EF125228 Genomic DNA. Translation: ABN58645.1.
    Z69382 Genomic DNA. Translation: CAA93386.1.
    Z71397 Genomic DNA. Translation: CAA96002.1.
    BK006947 Genomic DNA. Translation: DAA10428.1.
    PIRiS63062. MMBYO.
    RefSeqiNP_014278.3. NM_001182959.3.

    Genome annotation databases

    EnsemblFungiiYNL121C; YNL121C; YNL121C.
    GeneIDi855602.
    KEGGisce:YNL121C.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X05585 Genomic DNA. Translation: CAA29085.1 .
    EF125216 Genomic DNA. Translation: ABN58537.1 .
    EF125217 Genomic DNA. Translation: ABN58546.1 .
    EF125218 Genomic DNA. Translation: ABN58555.1 .
    EF125219 Genomic DNA. Translation: ABN58564.1 .
    EF125220 Genomic DNA. Translation: ABN58573.1 .
    EF125221 Genomic DNA. Translation: ABN58582.1 .
    EF125222 Genomic DNA. Translation: ABN58591.1 .
    EF125223 Genomic DNA. Translation: ABN58600.1 .
    EF125224 Genomic DNA. Translation: ABN58609.1 .
    EF125225 Genomic DNA. Translation: ABN58618.1 .
    EF125226 Genomic DNA. Translation: ABN58627.1 .
    EF125228 Genomic DNA. Translation: ABN58645.1 .
    Z69382 Genomic DNA. Translation: CAA93386.1 .
    Z71397 Genomic DNA. Translation: CAA96002.1 .
    BK006947 Genomic DNA. Translation: DAA10428.1 .
    PIRi S63062. MMBYO.
    RefSeqi NP_014278.3. NM_001182959.3.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2GW1 X-ray 3.00 A/B 94-607 [» ]
    ProteinModelPortali P07213.
    SMRi P07213. Positions 94-607.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 35706. 157 interactions.
    DIPi DIP-2301N.
    IntActi P07213. 12 interactions.
    MINTi MINT-508943.
    STRINGi 4932.YNL121C.

    Protein family/group databases

    TCDBi 3.A.8.1.1. the mitochondrial protein translocase (mpt) family.

    Proteomic databases

    MaxQBi P07213.
    PaxDbi P07213.
    PeptideAtlasi P07213.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YNL121C ; YNL121C ; YNL121C .
    GeneIDi 855602.
    KEGGi sce:YNL121C.

    Organism-specific databases

    CYGDi YNL121c.
    SGDi S000005065. TOM70.

    Phylogenomic databases

    eggNOGi NOG290605.
    GeneTreei ENSGT00750000117222.
    KOi K17768.
    OMAi CILEAFQ.
    OrthoDBi EOG7R839F.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-33142-MONOMER.
    Reactomei REACT_189012. Mitochondrial protein import.

    Miscellaneous databases

    EvolutionaryTracei P07213.
    NextBioi 979768.

    Gene expression databases

    Genevestigatori P07213.

    Family and domain databases

    Gene3Di 1.25.40.10. 3 hits.
    InterProi IPR005687. Tom70.
    IPR013026. TPR-contain_dom.
    IPR011990. TPR-like_helical.
    IPR001440. TPR_1.
    IPR019734. TPR_repeat.
    [Graphical view ]
    Pfami PF00515. TPR_1. 2 hits.
    [Graphical view ]
    SMARTi SM00028. TPR. 6 hits.
    [Graphical view ]
    TIGRFAMsi TIGR00990. 3a0801s09. 1 hit.
    PROSITEi PS50005. TPR. 6 hits.
    PS50293. TPR_REGION. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Import of proteins into mitochondria: nucleotide sequence of the gene for a 70-kd protein of the yeast mitochondrial outer membrane."
      Hase T., Riezman H., Suda K., Schatz G.
      EMBO J. 2:2169-2172(1983) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Sequential elimination of major-effect contributors identifies additional quantitative trait loci conditioning high-temperature growth in yeast."
      Sinha H., David L., Pascon R.C., Clauder-Muenster S., Krishnakumar S., Nguyen M., Shi G., Dean J., Davis R.W., Oefner P.J., McCusker J.H., Steinmetz L.M.
      Genetics 180:1661-1670(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS SER-30; SER-68; HIS-277; SER-359; ILE-364; HIS-385 AND GLY-429.
      Strain: ATCC 200060 / W303, S103, SK1, V1-09, YJM 1129, YJM 269, YJM 270, YJM 320, YJM 326, YJM 339, YJM 627 and YJM230.
    3. "The DNA sequence of cosmid 14-13b from chromosome XIV of Saccharomyces cerevisiae reveals an unusually high number of overlapping open reading frames."
      de Antoni A., D'Angelo M., Dal Pero F., Sartorello F., Pandolfo D., Pallavicini A., Lanfranchi G., Valle G.
      Yeast 13:261-266(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    4. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications."
      Philippsen P., Kleine K., Poehlmann R., Duesterhoeft A., Hamberg K., Hegemann J.H., Obermaier B., Urrestarazu L.A., Aert R., Albermann K., Altmann R., Andre B., Baladron V., Ballesta J.P.G., Becam A.-M., Beinhauer J.D., Boskovic J., Buitrago M.J.
      , Bussereau F., Coster F., Crouzet M., D'Angelo M., Dal Pero F., De Antoni A., del Rey F., Doignon F., Domdey H., Dubois E., Fiedler T.A., Fleig U., Floeth M., Fritz C., Gaillardin C., Garcia-Cantalejo J.M., Glansdorff N., Goffeau A., Gueldener U., Herbert C.J., Heumann K., Heuss-Neitzel D., Hilbert H., Hinni K., Iraqui Houssaini I., Jacquet M., Jimenez A., Jonniaux J.-L., Karpfinger-Hartl L., Lanfranchi G., Lepingle A., Levesque H., Lyck R., Maftahi M., Mallet L., Maurer C.T.C., Messenguy F., Mewes H.-W., Moestl D., Nasr F., Nicaud J.-M., Niedenthal R.K., Pandolfo D., Pierard A., Piravandi E., Planta R.J., Pohl T.M., Purnelle B., Rebischung C., Remacha M.A., Revuelta J.L., Rinke M., Saiz J.E., Sartorello F., Scherens B., Sen-Gupta M., Soler-Mira A., Urbanus J.H.M., Valle G., Van Dyck L., Verhasselt P., Vierendeels F., Vissers S., Voet M., Volckaert G., Wach A., Wambutt R., Wedler H., Zollner A., Hani J.
      Nature 387:93-98(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    5. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    6. Cited for: DOMAINS TPR REPEATS.
    7. "Protein import into yeast mitochondria is accelerated by the outer membrane protein MAS70."
      Hines V., Brandt A., Griffiths G., Horstmann H., Brutsch H., Schatz G.
      EMBO J. 9:3191-3200(1990) [PubMed] [Europe PMC] [Abstract]
      Cited for: CHARACTERIZATION.
    8. "Precursor binding to yeast mitochondria. A general role for the outer membrane protein Mas70p."
      Hines V., Schatz G.
      J. Biol. Chem. 268:449-454(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: CHARACTERIZATION.
    9. "Preprotein translocase of the outer mitochondrial membrane: molecular dissection and assembly of the general import pore complex."
      Dekker P.J.T., Ryan M.T., Brix J., Mueller H., Hoenlinger A., Pfanner N.
      Mol. Cell. Biol. 18:6515-6524(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION IN THE TOM COMPLEX.
    10. Cited for: INTERACTION WITH TOM22.
    11. "The mitochondrial import receptor Tom70: identification of a 25 kDa core domain with a specific binding site for preproteins."
      Brix J., Ziegler G.A., Dietmeier K., Schneider-Mergener J., Schulz G.E., Pfanner N.
      J. Mol. Biol. 303:479-488(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: FUNCTION.
    12. "Yeast mitochondrial dehydrogenases are associated in a supramolecular complex."
      Grandier-Vazeille X., Bathany K., Chaignepain S., Camougrand N., Manon S., Schmitter J.-M.
      Biochemistry 40:9758-9769(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: SUBCELLULAR LOCATION.
    13. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
    14. "Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae."
      Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J., Elias J.E., Gygi S.P.
      J. Proteome Res. 6:1190-1197(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Strain: ADR376.
    15. "Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry."
      Chi A., Huttenhower C., Geer L.Y., Coon J.J., Syka J.E.P., Bai D.L., Shabanowitz J., Burke D.J., Troyanskaya O.G., Hunt D.F.
      Proc. Natl. Acad. Sci. U.S.A. 104:2193-2198(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-174, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    16. "A multidimensional chromatography technology for in-depth phosphoproteome analysis."
      Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
      Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    17. "Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution."
      Holt L.J., Tuch B.B., Villen J., Johnson A.D., Gygi S.P., Morgan D.O.
      Science 325:1682-1686(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    18. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiTOM70_YEAST
    AccessioniPrimary (citable) accession number: P07213
    Secondary accession number(s): B0KZR5
    , B0KZS4, B0KZU2, B0KZY7, B0KZZ6, B0L005, B0L023, D6W162
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 1, 1988
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 164 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 45300 molecules/cell in log phase SD medium.1 Publication

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families
    3. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    4. Yeast chromosome XIV
      Yeast (Saccharomyces cerevisiae) chromosome XIV: entries and gene names

    External Data

    Dasty 3