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P07183 (CH38_DROME) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 89. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Chorion protein S38
Gene names
Name:Cp38
Synonyms:s38
ORF Names:CG1121
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length306 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 306306Chorion protein S38
PRO_0000089631

Experimental info

Sequence conflict251S → F in ABO71697. Ref.2
Sequence conflict991V → A in ABO71697. Ref.2
Sequence conflict1041N → D in ABY20454. Ref.5
Sequence conflict1061L → P in ABO71697. Ref.2
Sequence conflict1381V → G in ABO71697. Ref.2

Sequences

Sequence LengthMass (Da)Tools
P07183 [UniParc].

Last modified April 1, 1988. Version 1.
Checksum: 2F51C96F9F82DF83

FASTA30630,448
        10         20         30         40         50         60 
MTRSTYIWAL AACLIACASA NYGSSQGYGP ESGSGASDGG ADAASAAAAA AGGAGGAGGE 

        70         80         90        100        110        120 
YGGANAGAGA LESGADAAGV AQAGQSSYGS DQNIPYKPVN TKGNTLTSSI TYPQNKGEIL 

       130        140        150        160        170        180 
IHRPAPIIVK RPPTKVLVNH PPLVVKPAPV VLHKPPAIVL RKVYVKHHPR RVKVEPVFVN 

       190        200        210        220        230        240 
VVKPPAEKYF VNENKQGYGQ GSQSHGHGHG HGGHGHGHSG HGHGGHGAGP HGPGPHDGGR 

       250        260        270        280        290        300 
ALPAYASGAD SAAASAGYQL LQSGNQGLSA LANIAGEREG PYGPAPSHQH YSAGPAGHGG 


YAAPAY

« Hide

References

« Hide 'large scale' references
[1]"Amplification of the X-linked Drosophila chorion gene cluster requires a region upstream from the s38 chorion gene."
Spradling A.C., de Cicco D.V., Wakimoto B.T., Levine J.F., Kalfayan L.J., Cooley L.
EMBO J. 6:1045-1053(1987) [PubMed: 3036489] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Rapid evolution of outer egg membrane proteins in the Drosophila melanogaster subgroup: a case of ecologically driven evolution of female reproductive traits."
Jagadeeshan S., Singh R.S.
Mol. Biol. Evol. 24:929-938(2007) [PubMed: 17244601] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[3]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[4]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Berkeley.
[5]Stapleton M., Carlson J.W., Frise E., Kapadia B., Park S., Wan K.H., Yu C., Celniker S.E.
Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: Berkeley.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		X05245 Genomic DNA. Translation: CAA28871.1.
EF441656 Genomic DNA. Translation: ABO71697.1.
AE014298 Genomic DNA. Translation: AAF46383.1.
BT031213 mRNA. Translation: ABY20454.1.
BT031224 mRNA. Translation: ABY20465.1.
BT031228 mRNA. Translation: ABY20469.1.
PIRS08607.
RefSeqNP_001162703.1. NM_001169232.1.
NP_511088.1. NM_078533.2.
UniGeneDm.26501.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

DIPDIP-19197N.
IntActP07183. 3 interactions.
MINTMINT-309950.
STRINGP07183.

Proteomic databases

PRIDEP07183.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0071204; FBpp0071151; FBgn0000360.
FBtr0300448; FBpp0289676; FBgn0000360.
GeneID31788.
KEGGdme:Dmel_CG11213.
NMPDRfig|7227.3.peg.17004.

Organism-specific databases

CTD31788.
FlyBaseFBgn0000360. Cp38.

Phylogenomic databases

GeneTreeEMGT00050000010641.
InParanoidP07183.
OMAAACLIAC.
PhylomeDBP07183.

Gene expression databases

BgeeP07183.
GermOnlineCG11213. Drosophila melanogaster.

Family and domain databases

InterProIPR008449. Chorion_S36/S28.
[Graphical view]
PfamPF05387. Chorion_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio775293.

Entry information

Entry nameCH38_DROME
AccessionPrimary (citable) accession number: P07183
Secondary accession number(s): A4ULY8 expand/collapse secondary AC list , A9UN49, A9UN60, Q9W3E5
Entry history
Integrated into UniProtKB/Swiss-Prot: April 1, 1988
Last sequence update: April 1, 1988
Last modified: January 25, 2012
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Relevant documents

Drosophila

Drosophila: entries, gene names and cross-references to FlyBase

to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents