Reviewed, UniProtKB/Swiss-Prot P07183 (CH38_DROME)

Names and origin

Protein names

Recommended name:
    Chorion protein S38

Gene names

Name:	Cp38
Synonyms:	s38
ORF Names:	CG1121

Organism

Drosophila melanogaster (Fruit fly) [Complete proteome]

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	306 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	multicellular organismal development Inferred from electronic annotation. Source: InterPro
Cellular component	chorion Inferred from electronic annotation. Source: InterPro
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	Q9VPB0	1	EBI-143516,EBI-192641
CstF-50	Q9V9V0	1	EBI-143516,EBI-135868
EG:BACR37P7.5	Q9V3G9	1	EBI-143516,EBI-162998
ewg	Q24312-2	1	EBI-143516,EBI-208662

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 306	306	Chorion protein S38		PRO_0000089631
Experimental info
	Sequence conflict	25	1	S → F in ABO71697. Ref.2
	Sequence conflict	99	1	V → A in ABO71697. Ref.2
	Sequence conflict	104	1	N → D in ABY20454. Ref.5
	Sequence conflict	106	1	L → P in ABO71697. Ref.2
	Sequence conflict	138	1	V → G in ABO71697. Ref.2

Sequences

	Sequence		Length	Mass (Da)
	P07183-1 [UniParc]. Last modified April 1, 1988. Version 1. Checksum: 2F51C96F9F82DF83	FASTA	306	30,448
	10 20 30 40 50 60 MTRSTYIWAL AACLIACASA NYGSSQGYGP ESGSGASDGG ADAASAAAAA AGGAGGAGGE 70 80 90 100 110 120 YGGANAGAGA LESGADAAGV AQAGQSSYGS DQNIPYKPVN TKGNTLTSSI TYPQNKGEIL 130 140 150 160 170 180 IHRPAPIIVK RPPTKVLVNH PPLVVKPAPV VLHKPPAIVL RKVYVKHHPR RVKVEPVFVN 190 200 210 220 230 240 VVKPPAEKYF VNENKQGYGQ GSQSHGHGHG HGGHGHGHSG HGHGGHGAGP HGPGPHDGGR 250 260 270 280 290 300 ALPAYASGAD SAAASAGYQL LQSGNQGLSA LANIAGEREG PYGPAPSHQH YSAGPAGHGG YAAPAY

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Amplification of the X-linked Drosophila chorion gene cluster requires a region upstream from the s38 chorion gene." Spradling A.C., de Cicco D.V., Wakimoto B.T., Levine J.F., Kalfayan L.J., Cooley L. EMBO J. 6:1045-1053(1987) [PubMed: 3036489] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"Rapid evolution of outer egg membrane proteins in the Drosophila melanogaster subgroup: a case of ecologically driven evolution of female reproductive traits." Jagadeeshan S., Singh R.S. Mol. Biol. Evol. 24:929-938(2007) [PubMed: 17244601] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[3]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[4]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: GENOME REANNOTATION.
[5]	Stapleton M., Carlson J.W., Frise E., Kapadia B., Park S., Wan K.H., Yu C., Celniker S.E. Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: Berkeley.

Cross-references

Sequence databases
EMBLGenBankDDBJ	X05245 Genomic DNA. Translation: CAA28871.1. EF441656 Genomic DNA. Translation: ABO71697.1. AE014298 Genomic DNA. Translation: AAF46383.1. BT031213 mRNA. Translation: ABY20454.1. BT031224 mRNA. Translation: ABY20465.1. BT031228 mRNA. Translation: ABY20469.1.
PIR	S08607.
RefSeq	NP_511088.1.
UniGene	Dm.26501
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:19197N.
IntAct	P07183. 35 interactions.
Proteomic databases
PRIDE	P07183.
Genome annotation databases
Ensembl	FBgn0000360. Drosophila melanogaster. [Contig view]
GeneID	31788.
KEGG	dme:Dmel_CG11213.
NMPDR	fig|7227.3.peg.17004.
Organism-specific databases
FlyBase	FBgn0000360. Cp38.
Phylogenomic databases
HOGENOM	P07183.
OMA	P07183. AACLIAC.
Enzyme and pathway databases
BioCyc	DMEL-XXX-02:DMEL-XXX-02-001095-MON.
Gene expression databases
ArrayExpress	P07183.
GermOnline	CG11213. Drosophila melanogaster.
Family and domain databases
InterPro	IPR008449. Chorion_3. [Graphical view]
Pfam	PF05387. Chorion_3. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	775293.

Entry information

Entry name

CH38_DROME

Accession

Primary (citable) accession number: P07183
Secondary accession number(s): A4ULY8 , A9UN49, A9UN60, Q9W3E5

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 1, 1988
Last sequence update:	April 1, 1988
Last modified:	June 16, 2009
This is version 69 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

Drosophila annotation project