Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Protein virC1

Gene

virC1

Organism
Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Miscellaneous

The Ti plasmid contains at least six transcriptional units, designated vir loci, which are essential for efficient crown-gall tumorigenesis.

GO - Molecular functioni

Enzyme and pathway databases

BioCyciAGRO:ATU6180-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein virC1
Gene namesi
Name:virC1
Ordered Locus Names:Atu6180
ORF Names:AGR_pTi_18
Encoded oniPlasmid pTiC580 Publication
OrganismiAgrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
Taxonomic identifieri176299 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex
Proteomesi
  • UP000000813 Componenti: Plasmid Ti

Pathology & Biotechi

Keywords - Diseasei

Crown gall tumor

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000658501 – 231Protein virC1Add BLAST231

Interactioni

Binary interactionsi

Show more details

Protein-protein interaction databases

IntActiP07165. 4 interactors.
MINTiMINT-4794295.

Structurei

3D structure databases

ProteinModelPortaliP07165.
SMRiP07165.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000091437.
OMAiMHERDAF.

Family and domain databases

InterProiView protein in InterPro
IPR027417. P-loop_NTPase.
IPR009744. VirC1.
PfamiView protein in Pfam
PF07015. VirC1. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

P07165-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLLTFCSFK GGAGKTTALM GLCAAFASDG KRLALFDADE NRPLTRWKEN
60 70 80 90 100
ALRSNTWGSF CEVYAAEEMA LLEAAYEDAE LQGFDYALAD THGGSSELNN
110 120 130 140 150
TIIASSNLLL IPTMLTPLDI DEALSTYRYV IELLLSENLA IPTAVLRQRV
160 170 180 190 200
PVGRLTTSQR AMSDMLASLP VVQSPMHERD AFAAMKERGM LHLTLLNMRT
210 220 230
DPTMRLLERN LRIAMEELVT ISKLVSEALE G
Length:231
Mass (Da):25,507
Last modified:April 1, 1988 - v1
Checksum:i61CA5A8DE130636B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y00535 Genomic DNA. Translation: CAA68597.1.
J03320 Genomic DNA. No translation available.
M16397 Genomic DNA. Translation: AAA98386.1.
AE007871 Genomic DNA. Translation: AAK90942.1.
PIRiA25975.
AB3250.
RefSeqiNP_396501.1. NC_003065.3.
WP_010891490.1. NC_003065.3.

Genome annotation databases

EnsemblBacteriaiAAK90942; AAK90942; Atu6180.
GeneIDi1137503.
31903114.
KEGGiatu:Atu6180.
PATRICifig|176299.10.peg.5374.

Similar proteinsi

Entry informationi

Entry nameiVIRC1_AGRFC
AccessioniPrimary (citable) accession number: P07165
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 1, 1988
Last sequence update: April 1, 1988
Last modified: July 5, 2017
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome