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Protein

Protein TraJ

Gene

traJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

This protein is essential for positively regulating the expression of transfer genes that are involved in the conjugal transfer of DNA between bacterial cells.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator
Biological processConjugation, Transcription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Protein TraJ
Gene namesi
Name:traJ
Ordered Locus Names:ECOK12F072
Encoded oniPlasmid F0 Publication
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000684561 – 229Protein TraJAdd BLAST229

Proteomic databases

PRIDEiP06626.

Interactioni

Protein-protein interaction databases

IntActiP06626. 1 interactor.

Structurei

Secondary structure

1229
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi17 – 25Combined sources9
Beta strandi32 – 36Combined sources5
Beta strandi41 – 44Combined sources4
Helixi46 – 52Combined sources7
Helixi59 – 65Combined sources7
Helixi70 – 80Combined sources11
Beta strandi88 – 96Combined sources9
Beta strandi99 – 110Combined sources12
Beta strandi113 – 127Combined sources15

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4KQDX-ray1.55A/B/C/D14-133[»]
ProteinModelPortaliP06626.
SMRiP06626.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR016383. TraJ.
IPR011991. WHTH_DNA-bd_dom.
PIRSFiPIRSF003267. TraJ_F. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.

Sequencei

Sequence statusi: Complete.

P06626-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYPMDRIQQK HARQIDLLEN LTAVIQDYPN PACIRDETGK FIFCNTLFHE
60 70 80 90 100
SFLTQDQSAE KWLLSQRDFC ELISVTEMEA YRNEHTHLNL VEDVFIQNRF
110 120 130 140 150
WTISVQSFLN GHRNIILWQF YDAAHVRHKD SYNQKTIVSD DIRNIIRRMS
160 170 180 190 200
DDSSVSSYVN DVFYLYSTGI SHNAIARILN ISISTSKKHA SLICDYFSVS
210 220
NKDELIILLY NKKFIYYLYE KAMCIINTR
Length:229
Mass (Da):27,062
Last modified:January 1, 1988 - v1
Checksum:iDBCD92A0465A0DA9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K01147 Genomic DNA. Translation: AAA24908.1.
U01159 Genomic DNA. Translation: AAC44188.1.
AP001918 Genomic DNA. Translation: BAA97942.1.
X00545 Genomic DNA. Translation: CAA25217.1.
PIRiA21874. BVECTJ.
RefSeqiNP_061451.1. NC_002483.1.
NP_862917.1. NC_004998.1.
WP_000283385.1. NZ_CP014273.1.
YP_003937615.1. NC_014615.1.
YP_009060158.1. NC_024956.1.
YP_009068353.1. NC_025139.1.
YP_009070618.1. NC_025175.1.
YP_009071228.1. NC_025179.1.

Genome annotation databases

GeneIDi1263572.
1446481.
20466908.
20491483.
20492686.
20493300.
9846155.
PATRICifig|83333.107.peg.641.

Similar proteinsi

Entry informationi

Entry nameiTRAJ1_ECOLI
AccessioniPrimary (citable) accession number: P06626
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 1, 1988
Last sequence update: January 1, 1988
Last modified: June 7, 2017
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Plasmid

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references