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P06567

- DNAI_BACSU

UniProt

P06567 - DNAI_BACSU

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Protein

Primosomal protein DnaI

Gene
dnaI, ytxA, BSU28980
Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Probably involved in DNA replication.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi168 – 1758ATP Inferred

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. nucleoside-triphosphatase activity Source: InterPro
  3. protein binding Source: IntAct

GO - Biological processi

  1. DNA replication, synthesis of RNA primer Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

DNA replication

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciBSUB:BSU28980-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Primosomal protein DnaI
Gene namesi
Name:dnaI
Synonyms:ytxA
Ordered Locus Names:BSU28980
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570: Chromosome

Organism-specific databases

GenoListiBSU28980. [Micado]

Subcellular locationi

GO - Cellular componenti

  1. primosome complex Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Primosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 311311Primosomal protein DnaIPRO_0000114313Add
BLAST

Proteomic databases

PaxDbiP06567.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
dnaCP374694EBI-2122847,EBI-2122822

Protein-protein interaction databases

IntActiP06567. 4 interactions.
STRINGi224308.BSU28980.

Structurei

Secondary structure

1
311
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi16 – 2813
Helixi32 – 409
Turni42 – 443
Helixi47 – 526
Helixi54 – 629
Turni68 – 703
Beta strandi83 – 908
Beta strandi93 – 1008
Helixi102 – 1043

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K7RNMR-A1-106[»]
4M4WX-ray6.10J/K/L/M/N/O1-311[»]
ProteinModelPortaliP06567.
SMRiP06567. Positions 113-304.

Miscellaneous databases

EvolutionaryTraceiP06567.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1484.
HOGENOMiHOG000020545.
KOiK11144.
OMAiILQARMD.
OrthoDBiEOG6HXJ30.
PhylomeDBiP06567.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR009928. DnaI_N.
IPR002611. IstB_ATP-bd.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF07319. DnaI_N. 1 hit.
PF01695. IstB_IS21. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

P06567-1 [UniParc]FASTAAdd to Basket

« Hide

MEPIGRSLQG VTGRPDFQKR LEQMKEKVMK DQDVQAFLKE NEEVIDQKMI    50
EKSLNKLYEY IEQSKNCSYC SEDENCNNLL EGYHPKLVVN GRSIDIEYYE 100
CPVKRKLDQQ KKQQSLMKSM YIQQDLLGAT FQQVDISDPS RLAMFQHVTD 150
FLKSYNETGK GKGLYLYGKF GVGKTFMLAA IANELAEKEY SSMIVYVPEF 200
VRELKNSLQD QTLEEKLNMV KTTPVLMLDD IGAESMTSWV RDEVIGTVLQ 250
HRMSQQLPTF FSSNFSPDEL KHHFTYSQRG EKEEVKAARL MERILYLAAP 300
IRLDGENRRH P 311
Length:311
Mass (Da):36,114
Last modified:January 1, 1988 - v1
Checksum:iA86FC94AB6841264
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti19 – 191K → N in AAA22405. 1 Publication
Sequence conflicti24 – 241M → T in AAA22405. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X04963 Genomic DNA. Translation: CAA28633.1.
Z75208 Genomic DNA. Translation: CAA99605.1.
AF008220 Genomic DNA. Translation: AAC00359.1.
AL009126 Genomic DNA. Translation: CAB14858.1.
M15183 Genomic DNA. Translation: AAA22405.1.
PIRiB24720. IQBS44.
RefSeqiNP_390776.1. NC_000964.3.
WP_003229466.1. NZ_CM000487.1.

Genome annotation databases

EnsemblBacteriaiCAB14858; CAB14858; BSU28980.
GeneIDi936873.
KEGGibsu:BSU28980.
PATRICi18977688. VBIBacSub10457_3032.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X04963 Genomic DNA. Translation: CAA28633.1 .
Z75208 Genomic DNA. Translation: CAA99605.1 .
AF008220 Genomic DNA. Translation: AAC00359.1 .
AL009126 Genomic DNA. Translation: CAB14858.1 .
M15183 Genomic DNA. Translation: AAA22405.1 .
PIRi B24720. IQBS44.
RefSeqi NP_390776.1. NC_000964.3.
WP_003229466.1. NZ_CM000487.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2K7R NMR - A 1-106 [» ]
4M4W X-ray 6.10 J/K/L/M/N/O 1-311 [» ]
ProteinModelPortali P06567.
SMRi P06567. Positions 113-304.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P06567. 4 interactions.
STRINGi 224308.BSU28980.

Proteomic databases

PaxDbi P06567.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB14858 ; CAB14858 ; BSU28980 .
GeneIDi 936873.
KEGGi bsu:BSU28980.
PATRICi 18977688. VBIBacSub10457_3032.

Organism-specific databases

GenoListi BSU28980. [Micado ]

Phylogenomic databases

eggNOGi COG1484.
HOGENOMi HOG000020545.
KOi K11144.
OMAi ILQARMD.
OrthoDBi EOG6HXJ30.
PhylomeDBi P06567.

Enzyme and pathway databases

BioCyci BSUB:BSU28980-MONOMER.

Miscellaneous databases

EvolutionaryTracei P06567.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR003593. AAA+_ATPase.
IPR009928. DnaI_N.
IPR002611. IstB_ATP-bd.
IPR027417. P-loop_NTPase.
[Graphical view ]
Pfami PF07319. DnaI_N. 1 hit.
PF01695. IstB_IS21. 1 hit.
[Graphical view ]
SMARTi SM00382. AAA. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence and organization of dnaB gene and neighbouring genes on the Bacillus subtilis chromosome."
    Ogasawara N., Moriya S., Mazza P.G., Yoshikawa H.
    Nucleic Acids Res. 14:9989-9999(1986) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The dnaB-pheA (256 degrees-240 degrees) region of the Bacillus subtilis chromosome containing genes responsible for stress responses, the utilization of plant cell walls and primary metabolism."
    Wipat A., Carter N., Brignell C.S., Guy J.B., Piper K., Sanders J., Emmerson P.T., Harwood C.R.
    Microbiology 142:3067-3078(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  3. "Sequencing and functional annotation of the Bacillus subtilis genes in the 200 kb rrnB-dnaB region."
    Lapidus A., Galleron N., Sorokin A., Ehrlich S.D.
    Microbiology 143:3431-3441(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  4. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  5. "Nucleotide sequence of Bacillus subtilis dnaB: a gene essential for DNA replication initiation and membrane attachment."
    Hoshino T., McKenzie T., Schmidt S., Tanaka T., Sueoka N.
    Proc. Natl. Acad. Sci. U.S.A. 84:653-657(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-206.
  6. "Archaebacterial virus SSV1 encodes a putative DnaA-like protein."
    Koonin E.V.
    Nucleic Acids Res. 20:1143-1143(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: SIMILARITY TO DNAA.
  7. "The Bacillus subtilis dnaI gene is part of the dnaB operon."
    Bruand C., Ehrlich S.D.
    Microbiology 141:1199-1200(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiDNAI_BACSU
AccessioniPrimary (citable) accession number: P06567
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 1, 1988
Last sequence update: January 1, 1988
Last modified: September 3, 2014
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

External Data

Dasty 3

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