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Protein

Primosomal protein DnaI

Gene

dnaI

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Probably involved in DNA replication.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi168 – 1758ATPCurated

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

DNA replication

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciBSUB:BSU28980-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Primosomal protein DnaI
Gene namesi
Name:dnaI
Synonyms:ytxA
Ordered Locus Names:BSU28980
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570 Componenti: Chromosome

Organism-specific databases

GenoListiBSU28980. [Micado]

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Primosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 311311Primosomal protein DnaIPRO_0000114313Add
BLAST

Proteomic databases

PaxDbiP06567.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
dnaCP374694EBI-2122847,EBI-2122822

Protein-protein interaction databases

IntActiP06567. 4 interactions.
STRINGi224308.Bsubs1_010100015811.

Structurei

Secondary structure

1
311
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi16 – 2813Combined sources
Helixi32 – 409Combined sources
Turni42 – 443Combined sources
Helixi47 – 526Combined sources
Helixi54 – 629Combined sources
Turni68 – 703Combined sources
Beta strandi83 – 908Combined sources
Beta strandi93 – 1008Combined sources
Helixi102 – 1043Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K7RNMR-A1-106[»]
4M4WX-ray6.10J/K/L/M/N/O1-311[»]
ProteinModelPortaliP06567.
SMRiP06567. Positions 113-304.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP06567.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1484.
HOGENOMiHOG000020545.
KOiK11144.
OMAiELKHHFT.
OrthoDBiEOG6HXJ30.
PhylomeDBiP06567.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR009928. DnaI_N.
IPR002611. IstB_ATP-bd.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF07319. DnaI_N. 1 hit.
PF01695. IstB_IS21. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

P06567-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEPIGRSLQG VTGRPDFQKR LEQMKEKVMK DQDVQAFLKE NEEVIDQKMI
60 70 80 90 100
EKSLNKLYEY IEQSKNCSYC SEDENCNNLL EGYHPKLVVN GRSIDIEYYE
110 120 130 140 150
CPVKRKLDQQ KKQQSLMKSM YIQQDLLGAT FQQVDISDPS RLAMFQHVTD
160 170 180 190 200
FLKSYNETGK GKGLYLYGKF GVGKTFMLAA IANELAEKEY SSMIVYVPEF
210 220 230 240 250
VRELKNSLQD QTLEEKLNMV KTTPVLMLDD IGAESMTSWV RDEVIGTVLQ
260 270 280 290 300
HRMSQQLPTF FSSNFSPDEL KHHFTYSQRG EKEEVKAARL MERILYLAAP
310
IRLDGENRRH P
Length:311
Mass (Da):36,114
Last modified:January 1, 1988 - v1
Checksum:iA86FC94AB6841264
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti19 – 191K → N in AAA22405 (PubMed:3027697).Curated
Sequence conflicti24 – 241M → T in AAA22405 (PubMed:3027697).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X04963 Genomic DNA. Translation: CAA28633.1.
Z75208 Genomic DNA. Translation: CAA99605.1.
AF008220 Genomic DNA. Translation: AAC00359.1.
AL009126 Genomic DNA. Translation: CAB14858.1.
M15183 Genomic DNA. Translation: AAA22405.1.
PIRiB24720. IQBS44.
RefSeqiNP_390776.1. NC_000964.3.
WP_003229466.1. NZ_JNCM01000036.1.

Genome annotation databases

EnsemblBacteriaiCAB14858; CAB14858; BSU28980.
GeneIDi936873.
KEGGibsu:BSU28980.
PATRICi18977688. VBIBacSub10457_3032.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X04963 Genomic DNA. Translation: CAA28633.1.
Z75208 Genomic DNA. Translation: CAA99605.1.
AF008220 Genomic DNA. Translation: AAC00359.1.
AL009126 Genomic DNA. Translation: CAB14858.1.
M15183 Genomic DNA. Translation: AAA22405.1.
PIRiB24720. IQBS44.
RefSeqiNP_390776.1. NC_000964.3.
WP_003229466.1. NZ_JNCM01000036.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K7RNMR-A1-106[»]
4M4WX-ray6.10J/K/L/M/N/O1-311[»]
ProteinModelPortaliP06567.
SMRiP06567. Positions 113-304.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP06567. 4 interactions.
STRINGi224308.Bsubs1_010100015811.

Proteomic databases

PaxDbiP06567.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB14858; CAB14858; BSU28980.
GeneIDi936873.
KEGGibsu:BSU28980.
PATRICi18977688. VBIBacSub10457_3032.

Organism-specific databases

GenoListiBSU28980. [Micado]

Phylogenomic databases

eggNOGiCOG1484.
HOGENOMiHOG000020545.
KOiK11144.
OMAiELKHHFT.
OrthoDBiEOG6HXJ30.
PhylomeDBiP06567.

Enzyme and pathway databases

BioCyciBSUB:BSU28980-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP06567.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR009928. DnaI_N.
IPR002611. IstB_ATP-bd.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF07319. DnaI_N. 1 hit.
PF01695. IstB_IS21. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence and organization of dnaB gene and neighbouring genes on the Bacillus subtilis chromosome."
    Ogasawara N., Moriya S., Mazza P.G., Yoshikawa H.
    Nucleic Acids Res. 14:9989-9999(1986) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The dnaB-pheA (256 degrees-240 degrees) region of the Bacillus subtilis chromosome containing genes responsible for stress responses, the utilization of plant cell walls and primary metabolism."
    Wipat A., Carter N., Brignell C.S., Guy J.B., Piper K., Sanders J., Emmerson P.T., Harwood C.R.
    Microbiology 142:3067-3078(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  3. "Sequencing and functional annotation of the Bacillus subtilis genes in the 200 kb rrnB-dnaB region."
    Lapidus A., Galleron N., Sorokin A., Ehrlich S.D.
    Microbiology 143:3431-3441(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  4. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  5. "Nucleotide sequence of Bacillus subtilis dnaB: a gene essential for DNA replication initiation and membrane attachment."
    Hoshino T., McKenzie T., Schmidt S., Tanaka T., Sueoka N.
    Proc. Natl. Acad. Sci. U.S.A. 84:653-657(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-206.
  6. "Archaebacterial virus SSV1 encodes a putative DnaA-like protein."
    Koonin E.V.
    Nucleic Acids Res. 20:1143-1143(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: SIMILARITY TO DNAA.
  7. "The Bacillus subtilis dnaI gene is part of the dnaB operon."
    Bruand C., Ehrlich S.D.
    Microbiology 141:1199-1200(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiDNAI_BACSU
AccessioniPrimary (citable) accession number: P06567
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 1, 1988
Last sequence update: January 1, 1988
Last modified: July 22, 2015
This is version 116 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.