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Protein

NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

Gene

ndhF

Organism
Marchantia polymorpha (Liverwort) (Marchantia aquatica)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity).By similarity

Catalytic activityi

NAD(P)H + plastoquinone = NAD(P)+ + plastoquinol.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductase
Biological processTransport
LigandNAD, NADP, Plastoquinone

Names & Taxonomyi

Protein namesi
Recommended name:
NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC:1.6.5.-)
Alternative name(s):
NAD(P)H dehydrogenase subunit 5
NADH-plastoquinone oxidoreductase subunit 5
Gene namesi
Name:ndhF
Synonyms:ndh5
Encoded oniPlastid; Chloroplast
OrganismiMarchantia polymorpha (Liverwort) (Marchantia aquatica)
Taxonomic identifieri3197 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaMarchantiophytaMarchantiopsidaMarchantiidaeMarchantialesMarchantiaceaeMarchantia

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei9 – 29HelicalSequence analysisAdd BLAST21
Transmembranei39 – 59HelicalSequence analysisAdd BLAST21
Transmembranei89 – 109HelicalSequence analysisAdd BLAST21
Transmembranei120 – 140HelicalSequence analysisAdd BLAST21
Transmembranei147 – 167HelicalSequence analysisAdd BLAST21
Transmembranei184 – 204HelicalSequence analysisAdd BLAST21
Transmembranei219 – 239HelicalSequence analysisAdd BLAST21
Transmembranei258 – 278HelicalSequence analysisAdd BLAST21
Transmembranei289 – 309HelicalSequence analysisAdd BLAST21
Transmembranei327 – 347HelicalSequence analysisAdd BLAST21
Transmembranei354 – 374HelicalSequence analysisAdd BLAST21
Transmembranei395 – 415HelicalSequence analysisAdd BLAST21
Transmembranei425 – 445HelicalSequence analysisAdd BLAST21
Transmembranei503 – 523HelicalSequence analysisAdd BLAST21
Transmembranei555 – 575HelicalSequence analysisAdd BLAST21
Transmembranei643 – 663HelicalSequence analysisAdd BLAST21
Transmembranei671 – 691HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Chloroplast, Membrane, Plastid, Thylakoid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001181931 – 692NAD(P)H-quinone oxidoreductase subunit 5, chloroplasticAdd BLAST692

Keywords - PTMi

Quinone

Interactioni

Subunit structurei

NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.By similarity

Family & Domainsi

Sequence similaritiesi

Belongs to the complex I subunit 5 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Family and domain databases

InterProiView protein in InterPro
IPR002128. NADH_UbQ_OxRdtase_chlpt_su5_C.
IPR003945. NADHpl_OxRdtase_5.
IPR018393. NADHpl_OxRdtase_5_subgr.
IPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
PfamiView protein in Pfam
PF01010. Proton_antipo_C. 1 hit.
PF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
PRINTSiPR01435. NPOXDRDTASE5.
TIGRFAMsiTIGR01974. NDH_I_L. 1 hit.

Sequencei

Sequence statusi: Complete.

P06264-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELIFQNVWF VPLFPFLASI LLGIGLFFFP NSIKKFRRLS SFISIMFLNI
60 70 80 90 100
AMLLSFHFFW QQITGSPIHR YLWSWVLYKN FVLEIGYLLD PLTSIMLVLV
110 120 130 140 150
TTVAVMVMIY SDSYMFYDEG YIKFFCYLSL FTASMLGLVL SPNLIQVYIF
160 170 180 190 200
WELVGMCSYL LIGFWFTRPS AANACQKAFV TNRIGDFGLL LGILGFYWIT
210 220 230 240 250
GSFDFQQLSK RFFELLSYNQ INLVFATLCA LFLFLGPVAK SAQFPLHIWL
260 270 280 290 300
PDAMEGPTPI SALIHAATMV AAGIFLVARM FPLFQMLPFV MSIISWTGAI
310 320 330 340 350
TALLGATIAL AQKDLKKGLA YSTMSQLGYM MLALGIGSYK AGLFHLITHA
360 370 380 390 400
YSKALLFLGS GSVIHSMEPI VGYHPNKSQN MIFMGGLRQY MPITAITFLF
410 420 430 440 450
GTLSLCGIPP FACFWSKDEI LVNSWLHFPI LGSIAFFTAG LTAFYMFRIY
460 470 480 490 500
FLTFEGDFRG HFFDDVKKLS SISIWGSLEF NKEQFKLDKK STLYPKEANN
510 520 530 540 550
IMLFPLIILT IPTVFIGFIG ILFDENKMNV DSLSYWLTLS INSFNYSNSE
560 570 580 590 600
KFLEFLFNAI PSVSIAFFGI LIAFYLYGPN FSFLKKEKKK LQLKSEIDIV
610 620 630 640 650
LKSFSNFIYN WSYYRAYIDG FYSSFFIKGL RFLIKIVSFI DRWIIDGIIN
660 670 680 690
GIGIFSFFGG ESLKYIEGGR ISSYLFFIIF CMFLFFLYSY II
Length:692
Mass (Da):79,279
Last modified:January 1, 1988 - v1
Checksum:i8A1959AD4251DE6B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X04465 Genomic DNA. Translation: CAA28129.1.
PIRiA00453. DELVN5.
RefSeqiNP_039343.1. NC_001319.1.

Genome annotation databases

GeneIDi2702575.

Similar proteinsi

Entry informationi

Entry nameiNU5C_MARPO
AccessioniPrimary (citable) accession number: P06264
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 1, 1988
Last sequence update: January 1, 1988
Last modified: September 16, 2015
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families