P06188 (ARAB_SALTY) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 75.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Ribulokinase EC=2.7.1.16 | ||||
| Gene names |
| ||||
| Organism | Salmonella typhimurium | ||||
| Taxonomic identifier | 90371 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella |
Protein attributes
| Sequence length | 569 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520 |
| Pathway | Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520 |
| Sequence similarities | Belongs to the ribulokinase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Arabinose catabolism Carbohydrate metabolism |
| Ligand | ATP-binding Nucleotide-binding |
| Molecular function | Kinase Transferase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | L-arabinose catabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed By similarity | |||||
| Chain | 2 – 569 | 568 | Ribulokinase HAMAP MF_00520 | PRO_0000198364 | ||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The araBAD operon of Salmonella typhimurium LT2. I. Nucleotide sequence of araB and primary structure of its product, ribulokinase." Lin H.-C., Lei S.-P., Wilcox G. Gene 34:111-122(1985) [PubMed: 2989100] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "Complete genome sequence of Salmonella enterica serovar Typhimurium LT2." McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P., Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D., Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E. Wilson R.K.Nature 413:852-856(2001) [PubMed: 11677609] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: LT2 / SGSC1412 / ATCC 700720. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | M11047 Genomic DNA. Translation: AAA27023.1. AE006468 Genomic DNA. Translation: AAL19067.1. |
| PIR | A24984. |
| RefSeq | NP_459108.1. NC_003197.1. |
3D structure databases | |
| ProteinModelPortal | P06188. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 1251621. |
| GenomeReviews | Gene locus STM0103 in contig AE006468_GR. |
| KEGG | stm:STM0103. |
| NMPDR | fig|99287.1.peg.101. |
| PATRIC | 32378473. VBISalEnt20916_0106. |
Phylogenomic databases | |
| HOGENOM | HBG312681. |
| OMA | NGRRTPD. |
| ProtClustDB | PRK04123. |
Enzyme and pathway databases | |
| BioCyc | STYP99287:STM0103-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00520. Ribulokinase. [Tree] |
| InterPro | IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view] |
| KO | K00853. |
| PANTHER | PTHR10196. FGGY_kin. 1 hit. |
| Pfam | PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR01234. L-ribulokinase. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | ARAB_SALTY | ||||||||
| Accession | Primary (citable) accession number: P06188 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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