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P06147

- RS12_TETTH

UniProt

P06147 - RS12_TETTH

Protein

40S ribosomal protein S12

Gene
N/A
Organism
Tetrahymena thermophila
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    40S ribosomal protein S12
    OrganismiTetrahymena thermophila
    Taxonomic identifieri5911 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

    Subcellular locationi

    GO - Cellular componenti

    1. small ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 14214240S ribosomal protein S12PRO_0000146454Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi5911.P06147.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2XZMX-ray3.93L1-142[»]
    2XZNX-ray3.93L1-142[»]
    4BPEX-ray3.70L1-142[»]
    4BPNX-ray3.70L1-142[»]
    4BPOX-ray3.70L1-142[»]
    4BPPX-ray3.70L1-142[»]
    ProteinModelPortaliP06147.
    SMRiP06147. Positions 29-141.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S12P family.Curated

    Phylogenomic databases

    eggNOGiCOG0048.
    KOiK02973.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012340. NA-bd_OB-fold.
    IPR006032. Ribosomal_S12/S23.
    IPR005680. Ribosomal_S23_euk/arc.
    [Graphical view]
    PANTHERiPTHR11652. PTHR11652. 1 hit.
    PfamiPF00164. Ribosom_S12_S23. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002133. Ribosomal_S12/S23. 1 hit.
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00982. S23_S12_E_A. 1 hit.
    PROSITEiPS00055. RIBOSOMAL_S12. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P06147-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGVGKPRGIR AGRKLARHRK DQRWADNDFN KRLLGSRWRN PFMGASHAKG    50
    LVTEKIGIES KQPNSAVRKC VRVLLRKNSK KIAAFVPMDG CLNFLAENDE 100
    VLVAGLGRQG HAVGDIPGVR FKVVCVKGIS LLALFKGKKE KR 142
    Length:142
    Mass (Da):15,743
    Last modified:January 1, 1988 - v1
    Checksum:i56E81C26C921E882
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X04425 Genomic DNA. Translation: CAA28021.1.
    PIRiA25699.
    RefSeqiXP_001011429.2. XM_001011429.2.
    UniGeneiTth.27967.

    Genome annotation databases

    GeneIDi7843597.
    KEGGitet:TTHERM_00434040.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X04425 Genomic DNA. Translation: CAA28021.1 .
    PIRi A25699.
    RefSeqi XP_001011429.2. XM_001011429.2.
    UniGenei Tth.27967.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2XZM X-ray 3.93 L 1-142 [» ]
    2XZN X-ray 3.93 L 1-142 [» ]
    4BPE X-ray 3.70 L 1-142 [» ]
    4BPN X-ray 3.70 L 1-142 [» ]
    4BPO X-ray 3.70 L 1-142 [» ]
    4BPP X-ray 3.70 L 1-142 [» ]
    ProteinModelPortali P06147.
    SMRi P06147. Positions 29-141.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5911.P06147.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7843597.
    KEGGi tet:TTHERM_00434040.

    Phylogenomic databases

    eggNOGi COG0048.
    KOi K02973.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012340. NA-bd_OB-fold.
    IPR006032. Ribosomal_S12/S23.
    IPR005680. Ribosomal_S23_euk/arc.
    [Graphical view ]
    PANTHERi PTHR11652. PTHR11652. 1 hit.
    Pfami PF00164. Ribosom_S12_S23. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002133. Ribosomal_S12/S23. 1 hit.
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00982. S23_S12_E_A. 1 hit.
    PROSITEi PS00055. RIBOSOMAL_S12. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "An intron in a ribosomal protein gene from Tetrahymena."
      Nielsen H., Andreasen P.H., Dreisig H., Kristiansen K., Engberg J.
      EMBO J. 5:2711-2717(1986) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

    Entry informationi

    Entry nameiRS12_TETTH
    AccessioniPrimary (citable) accession number: P06147
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 1, 1988
    Last sequence update: January 1, 1988
    Last modified: October 1, 2014
    This is version 71 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)

    Miscellaneousi

    Keywords - Technical termi

    3D-structure

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3