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P06147

- RS12_TETTH

UniProt

P06147 - RS12_TETTH

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Protein

40S ribosomal protein S12

Gene
N/A
Organism
Tetrahymena thermophila
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S12
OrganismiTetrahymena thermophila
Taxonomic identifieri5911 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Subcellular locationi

GO - Cellular componenti

  1. small ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14214240S ribosomal protein S12PRO_0000146454Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi5911.P06147.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2XZMX-ray3.93L1-142[»]
2XZNX-ray3.93L1-142[»]
4BPEX-ray3.70L1-142[»]
4BPNX-ray3.70L1-142[»]
4BPOX-ray3.70L1-142[»]
4BPPX-ray3.70L1-142[»]
ProteinModelPortaliP06147.
SMRiP06147. Positions 29-141.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S12P family.Curated

Phylogenomic databases

eggNOGiCOG0048.
KOiK02973.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR006032. Ribosomal_S12/S23.
IPR005680. Ribosomal_S23_euk/arc.
[Graphical view]
PANTHERiPTHR11652. PTHR11652. 1 hit.
PfamiPF00164. Ribosom_S12_S23. 1 hit.
[Graphical view]
PIRSFiPIRSF002133. Ribosomal_S12/S23. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00982. S23_S12_E_A. 1 hit.
PROSITEiPS00055. RIBOSOMAL_S12. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P06147-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGVGKPRGIR AGRKLARHRK DQRWADNDFN KRLLGSRWRN PFMGASHAKG
60 70 80 90 100
LVTEKIGIES KQPNSAVRKC VRVLLRKNSK KIAAFVPMDG CLNFLAENDE
110 120 130 140
VLVAGLGRQG HAVGDIPGVR FKVVCVKGIS LLALFKGKKE KR
Length:142
Mass (Da):15,743
Last modified:January 1, 1988 - v1
Checksum:i56E81C26C921E882
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X04425 Genomic DNA. Translation: CAA28021.1.
PIRiA25699.
RefSeqiXP_001011429.2. XM_001011429.2.
UniGeneiTth.27967.

Genome annotation databases

GeneIDi7843597.
KEGGitet:TTHERM_00434040.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X04425 Genomic DNA. Translation: CAA28021.1 .
PIRi A25699.
RefSeqi XP_001011429.2. XM_001011429.2.
UniGenei Tth.27967.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2XZM X-ray 3.93 L 1-142 [» ]
2XZN X-ray 3.93 L 1-142 [» ]
4BPE X-ray 3.70 L 1-142 [» ]
4BPN X-ray 3.70 L 1-142 [» ]
4BPO X-ray 3.70 L 1-142 [» ]
4BPP X-ray 3.70 L 1-142 [» ]
ProteinModelPortali P06147.
SMRi P06147. Positions 29-141.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5911.P06147.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 7843597.
KEGGi tet:TTHERM_00434040.

Phylogenomic databases

eggNOGi COG0048.
KOi K02973.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012340. NA-bd_OB-fold.
IPR006032. Ribosomal_S12/S23.
IPR005680. Ribosomal_S23_euk/arc.
[Graphical view ]
PANTHERi PTHR11652. PTHR11652. 1 hit.
Pfami PF00164. Ribosom_S12_S23. 1 hit.
[Graphical view ]
PIRSFi PIRSF002133. Ribosomal_S12/S23. 1 hit.
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00982. S23_S12_E_A. 1 hit.
PROSITEi PS00055. RIBOSOMAL_S12. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "An intron in a ribosomal protein gene from Tetrahymena."
    Nielsen H., Andreasen P.H., Dreisig H., Kristiansen K., Engberg J.
    EMBO J. 5:2711-2717(1986) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiRS12_TETTH
AccessioniPrimary (citable) accession number: P06147
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 1, 1988
Last sequence update: January 1, 1988
Last modified: October 1, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3