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Protein

40S ribosomal protein S21

Gene

Rps21

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S21
Gene namesi
Name:Rps21
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi621038. Rps21.

Subcellular locationi

GO - Cellular componenti

  • cytosolic small ribosomal subunit Source: RGD

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001947331 – 8340S ribosomal protein S21Add BLAST83

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei1N-acetylmethionine1 Publication1
Modified residuei81N6-acetyllysineBy similarity1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiP05765.
PRIDEiP05765.

PTM databases

iPTMnetiP05765.
PhosphoSitePlusiP05765.

Expressioni

Gene expression databases

BgeeiENSRNOG00000006325.

Interactioni

Protein-protein interaction databases

BioGridi249647. 1 interactor.
IntActiP05765. 3 interactors.
MINTiMINT-4565057.
STRINGi10116.ENSRNOP00000008458.

Structurei

3D structure databases

SMRiP05765.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3486. Eukaryota.
ENOG4112266. LUCA.
HOGENOMiHOG000183557.
HOVERGENiHBG005025.
InParanoidiP05765.
KOiK02971.
PhylomeDBiP05765.
TreeFamiTF300167.

Family and domain databases

InterProiView protein in InterPro
IPR001931. Ribosomal_S21e.
IPR018279. Ribosomal_S21e_CS.
PANTHERiPTHR10442. PTHR10442. 1 hit.
PfamiView protein in Pfam
PF01249. Ribosomal_S21e. 1 hit.
PIRSFiPIRSF002148. Ribosomal_S21e. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD006584. Ribosomal_S21e. 1 hit.
PROSITEiView protein in PROSITE
PS00996. RIBOSOMAL_S21E. 1 hit.

Sequencei

Sequence statusi: Complete.

P05765-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQNDAGEFVD LYVPRKCSAS NRIIAAKDHA SIQMNVAEVD RSTGRFNGQF
60 70 80
KTYGICGAIR RMGESDDSIL RLAKADGIVS KNF
Length:83
Mass (Da):9,127
Last modified:November 1, 1988 - v1
Checksum:i6790A08AEF4D0DB5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X79059 mRNA. Translation: CAA55658.1.
BC058464 mRNA. Translation: AAH58464.1.
PIRiC23862. R3RT21.
RefSeqiNP_112373.1. NM_031111.1.
UniGeneiRn.4153.

Genome annotation databases

GeneIDi81775.
KEGGirno:81775.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS21_RAT
AccessioniPrimary (citable) accession number: P05765
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1988
Last sequence update: November 1, 1988
Last modified: May 10, 2017
This is version 125 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families