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Protein

60S ribosomal protein L19-A

Gene

rpl1901

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L19-A
Alternative name(s):
YL15
Gene namesi
Name:rpl1901
Synonyms:rpl19, rpl19-1, rpl19a
ORF Names:SPBC56F2.02
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC56F2.02.
PomBaseiSPBC56F2.02. rpl1901.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • cytosolic large ribosomal subunit Source: PomBase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001311832 – 19360S ribosomal protein L19-AAdd BLAST192

Proteomic databases

MaxQBiP05734.
PRIDEiP05734.

Interactioni

Protein-protein interaction databases

BioGridi277387. 2 interactors.
MINTiMINT-4686832.
STRINGi4896.SPBC56F2.02.1.

Structurei

3D structure databases

ProteinModelPortaliP05734.
SMRiP05734.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000231277.
InParanoidiP05734.
KOiK02885.
OMAiMSEIAMA.
OrthoDBiEOG092C00Q9.
PhylomeDBiP05734.

Family and domain databases

CDDicd01417. Ribosomal_L19e_E. 1 hit.
Gene3Di1.10.1200.60. 1 hit.
1.10.1650.10. 1 hit.
1.20.5.560. 1 hit.
HAMAPiMF_01475. Ribosomal_L19e. 1 hit.
InterProiView protein in InterPro
IPR000196. Ribosomal_L19/L19e.
IPR015972. Ribosomal_L19/L19e_dom1.
IPR015973. Ribosomal_L19/L19e_dom2.
IPR015974. Ribosomal_L19/L19e_dom3.
IPR033935. Ribosomal_L19_euka.
PfamiView protein in Pfam
PF01280. Ribosomal_L19e. 1 hit.
SMARTiView protein in SMART
SM01416. Ribosomal_L19e. 1 hit.
SUPFAMiSSF48140. SSF48140. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P05734-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANLRTQKRL AASVLKCGKR KVWMDPNEIS EISNANSRQN VRKLIKDGLV
60 70 80 90 100
IRKPNLMHSR FRIRKTHAAK RLGRHTGYGK RKGTAEARMP SAVVWMRRQR
110 120 130 140 150
VLRRLLRKYR ESGKIDKHLY HTLYLEAKGN TFKHKRALIE HIQRAKAEAN
160 170 180 190
RTKLIQEQQD ARRARAKAAR QRRAKAVEEK REQLYTAAEK IEE
Length:193
Mass (Da):22,724
Last modified:January 23, 2007 - v3
Checksum:i80B4ABACC075F81A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti24M → G AA sequence (PubMed:6355773).Curated1
Sequence conflicti30S → G AA sequence (PubMed:6355773).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB015169 mRNA. Translation: BAA28752.1.
CU329671 Genomic DNA. Translation: CAA18881.1.
PIRiS10050.
T40542.
RefSeqiNP_596715.1. NM_001022640.2.

Genome annotation databases

EnsemblFungiiSPBC56F2.02.1; SPBC56F2.02.1:pep; SPBC56F2.02.
GeneIDi2540870.
KEGGispo:SPBC56F2.02.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL19A_SCHPO
AccessioniPrimary (citable) accession number: P05734
Secondary accession number(s): O60194
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1988
Last sequence update: January 23, 2007
Last modified: July 5, 2017
This is version 123 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families