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Protein

Uncharacterized 91 kDa protein in cob intron

Gene

SPMIT.06

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized 91 kDa protein in cob intron
Gene namesi
ORF Names:SPMIT.06
Encoded oniMitochondrion
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Mitochondrion

Organism-specific databases

PomBaseiSPMIT.06.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 807807Uncharacterized 91 kDa protein in cob intronPRO_0000196883Add
BLAST

Proteomic databases

MaxQBiP05511.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini281 – 566286Reverse transcriptasePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 reverse transcriptase domain.PROSITE-ProRule annotation

Phylogenomic databases

InParanoidiP05511.
OrthoDBiEOG7D2FP3.
PhylomeDBiP05511.

Family and domain databases

InterProiIPR024937. Domain_X.
IPR003615. HNH_nuc.
IPR000477. RT_dom.
[Graphical view]
PfamiPF01348. Intron_maturas2. 1 hit.
PF00078. RVT_1. 1 hit.
[Graphical view]
SMARTiSM00507. HNHc. 1 hit.
[Graphical view]
PROSITEiPS50878. RT_POL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P05511-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRCGIYVYP HRERDILCVK IWTIHLGSWG NPMPNRACVQ KVLPVTKQIS
60 70 80 90 100
SDGSVQIDTV RAVLPEFQFP SHPQIGDCLS WIETFFSRSL VGFYDQGYTP
110 120 130 140 150
GEESCTNSTI KGMSGKPTSI ISNIYTTTGP AKVSNDYAVR DPGVAVDHFD
160 170 180 190 200
QYGPLKEGRS LNSAKISTQW SGSATLKSSN RSIFNIGLGY INTFLGVSNV
210 220 230 240 250
RGFSTGSGRS KNVLNKLDDL SKRSKNYPNL VIDRNLYKDF LLNRDMFLIA
260 270 280 290 300
YNKLKSNPGM MTHGLKPDTL DGMSIDVIDK IIQSLKSEEF NFTPGRRILI
310 320 330 340 350
DKASGGKRPL TIGSPRDKLV QEILRIVLEA IYEPLFNTAS HGFRPGRSCH
360 370 380 390 400
SALRSIFTNF KGCTWWIEGD IKACFDSIPH DKLIALLSSK IKDQRFIQLI
410 420 430 440 450
RKALNAGYLT ENRYKYDIVG TPQGSIVSPI LANIYLHQLD EFIENLKSEF
460 470 480 490 500
DYKGPIARKR TSESRHLHYL MAKAKRENAD SKTIRKIAIE MRNVPNKIHG
510 520 530 540 550
IQSNKLMYVR YADDWIVAVN GSYTQTKEIL AKITCFCSSI GLTVSPTKTK
560 570 580 590 600
ITNSYTDKIL FLGTNISHSK NVTFSRHFGI LQRNSGFILL SAPMDRIAKK
610 620 630 640 650
LRETGLMLNH KGRSVIRWLP LDVRQIIGLA NSIIRGYDNY YSFVHNRGRF
660 670 680 690 700
ATYVYFIIKD CVLRTLAHKL SLGTRMKVIK KFGPDLSIYD YNSRDENNKP
710 720 730 740 750
KLITQLFKPS WKVNVWGFKS DKVKLNIRTL YASHLSMANL ENLQCAACQS
760 770 780 790 800
TYKVEMHHVR QMKNLKPIKG TLDYLMAKAN RKQIPLCRSC HMKLHANKLT

LNEDKKV
Length:807
Mass (Da):91,638
Last modified:December 15, 1998 - v4
Checksum:iAFD70F35E84CAA8F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X02819 Genomic DNA. Translation: CAA26587.1.
X54421 Genomic DNA. Translation: CAA38288.1.
RefSeqiNP_039503.1. NC_001326.1.

Genome annotation databases

GeneIDi1669529.
KEGGispo:ScpofMp05.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X02819 Genomic DNA. Translation: CAA26587.1.
X54421 Genomic DNA. Translation: CAA38288.1.
RefSeqiNP_039503.1. NC_001326.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiP05511.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1669529.
KEGGispo:ScpofMp05.

Organism-specific databases

PomBaseiSPMIT.06.

Phylogenomic databases

InParanoidiP05511.
OrthoDBiEOG7D2FP3.
PhylomeDBiP05511.

Miscellaneous databases

PROiP05511.

Family and domain databases

InterProiIPR024937. Domain_X.
IPR003615. HNH_nuc.
IPR000477. RT_dom.
[Graphical view]
PfamiPF01348. Intron_maturas2. 1 hit.
PF00078. RVT_1. 1 hit.
[Graphical view]
SMARTiSM00507. HNHc. 1 hit.
[Graphical view]
PROSITEiPS50878. RT_POL. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene."
    Lang B.F., Ahne F., Bonen L.
    J. Mol. Biol. 184:353-366(1985) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: AD7-50.
  2. "The mitochondrial genome of Schizosaccharomyces pombe."
    Lang B.F.
    (In) O'Brien S.J. (eds.); Genetic Maps (6th edition), pp.3118-3119, Cold Spring Harbor Laboratory Press, New York (1993)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AD7-50.

Entry informationi

Entry nameiYMC6_SCHPO
AccessioniPrimary (citable) accession number: P05511
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1988
Last sequence update: December 15, 1998
Last modified: July 6, 2016
This is version 101 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

This protein is coded in the group-II intron of cob.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.