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P05301

- T2D1_DESNO

UniProt

P05301 - T2D1_DESNO

Protein

Type-2 restriction enzyme DdeI

Gene

ddeIR

Organism
Desulfomicrobium norvegicum (strain DSM 1741 / NCIMB 8310) (Desulfovibrio baculatus (strain Norway 4)) (Desulfovibrio desulfuricans (strain Norway 4))
Status
Reviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 59 (16 Apr 2014)
      Sequence version 1 (01 Nov 1988)
      Previous versions | rss
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    Functioni

    Recognizes the double-stranded sequence CTNAG and cleaves after C-1.

    Catalytic activityi

    Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

    GO - Molecular functioni

    1. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA restriction-modification system Source: UniProtKB-KW

    Keywords - Molecular functioni

    Endonuclease, Hydrolase, Nuclease

    Keywords - Biological processi

    Restriction system

    Protein family/group databases

    REBASEi770. DdeI.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Type-2 restriction enzyme DdeI (EC:3.1.21.4)
    Short name:
    R.DdeI
    Alternative name(s):
    Endonuclease DdeI
    Type II restriction enzyme DdeI
    Gene namesi
    Name:ddeIR
    Synonyms:ddeR
    OrganismiDesulfomicrobium norvegicum (strain DSM 1741 / NCIMB 8310) (Desulfovibrio baculatus (strain Norway 4)) (Desulfovibrio desulfuricans (strain Norway 4))
    Taxonomic identifieri52561 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfomicrobiaceaeDesulfomicrobium

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 240240Type-2 restriction enzyme DdeIPRO_0000077299Add
    BLAST

    Sequencei

    Sequence statusi: Complete.

    P05301-1 [UniParc]FASTAAdd to Basket

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    MKAATDQELR KLIVLYNNVM EVMEHDAAKS MRDDNRAYGG FVRAAKGKIQ    50
    ELITERLVRT VWDVEMGENP ERLSINSKKI KIPILRSYVD SINDENLKKY 100
    ISSNILKYSY GLSVDKHVFI DNKFVLGIEC KAYTENAMLK RILVDFYLLK 150
    TKFPKLNCFL FQLESQLGGD YSECNKFPIG SYPTRTIMSY FKNVDLNIVT 200
    LLEGERKVDR PINKPQFFKP LKVEHLEVAI GYLQESLSEI 240
    Length:240
    Mass (Da):27,808
    Last modified:November 1, 1988 - v1
    Checksum:iAE0A7821F2F41356
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y00449 Genomic DNA. Translation: CAA68504.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y00449 Genomic DNA. Translation: CAA68504.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    REBASEi 770. DdeI.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Nucleotide sequence of the DdeI restriction-modification system and characterization of the methylase protein."
      Sznyter L.A., Slatko B., Moran L., O'Donnell K.H., Brooks J.E.
      Nucleic Acids Res. 15:8249-8266(1987) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

    Entry informationi

    Entry nameiT2D1_DESNO
    AccessioniPrimary (citable) accession number: P05301
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1988
    Last sequence update: November 1, 1988
    Last modified: April 16, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Documents

    1. Restriction enzymes and methylases
      Classification of restriction enzymes and methylases and list of entries

    External Data

    Dasty 3