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P05301

- T2D1_DESNO

UniProt

P05301 - T2D1_DESNO

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Protein
Type-2 restriction enzyme DdeI
Gene
ddeIR, ddeR
Organism
Desulfomicrobium norvegicum (strain DSM 1741 / NCIMB 8310) (Desulfovibrio baculatus (strain Norway 4)) (Desulfovibrio desulfuricans (strain Norway 4))
Status
Reviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

Recognizes the double-stranded sequence CTNAG and cleaves after C-1.

Catalytic activityi

Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

GO - Molecular functioni

  1. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. DNA restriction-modification system Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

Restriction system

Protein family/group databases

REBASEi770. DdeI.

Names & Taxonomyi

Protein namesi
Recommended name:
Type-2 restriction enzyme DdeI (EC:3.1.21.4)
Short name:
R.DdeI
Alternative name(s):
Endonuclease DdeI
Type II restriction enzyme DdeI
Gene namesi
Name:ddeIR
Synonyms:ddeR
OrganismiDesulfomicrobium norvegicum (strain DSM 1741 / NCIMB 8310) (Desulfovibrio baculatus (strain Norway 4)) (Desulfovibrio desulfuricans (strain Norway 4))
Taxonomic identifieri52561 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfomicrobiaceaeDesulfomicrobium

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 240240Type-2 restriction enzyme DdeI
PRO_0000077299Add
BLAST

Sequencei

Sequence statusi: Complete.

P05301-1 [UniParc]FASTAAdd to Basket

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MKAATDQELR KLIVLYNNVM EVMEHDAAKS MRDDNRAYGG FVRAAKGKIQ    50
ELITERLVRT VWDVEMGENP ERLSINSKKI KIPILRSYVD SINDENLKKY 100
ISSNILKYSY GLSVDKHVFI DNKFVLGIEC KAYTENAMLK RILVDFYLLK 150
TKFPKLNCFL FQLESQLGGD YSECNKFPIG SYPTRTIMSY FKNVDLNIVT 200
LLEGERKVDR PINKPQFFKP LKVEHLEVAI GYLQESLSEI 240
Length:240
Mass (Da):27,808
Last modified:November 1, 1988 - v1
Checksum:iAE0A7821F2F41356
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Y00449 Genomic DNA. Translation: CAA68504.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Y00449 Genomic DNA. Translation: CAA68504.1 .

3D structure databases

ModBasei Search...

Protein family/group databases

REBASEi 770. DdeI.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "Nucleotide sequence of the DdeI restriction-modification system and characterization of the methylase protein."
    Sznyter L.A., Slatko B., Moran L., O'Donnell K.H., Brooks J.E.
    Nucleic Acids Res. 15:8249-8266(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiT2D1_DESNO
AccessioniPrimary (citable) accession number: P05301
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1988
Last sequence update: November 1, 1988
Last modified: April 16, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Restriction enzymes and methylases
    Classification of restriction enzymes and methylases and list of entries

External Data

Dasty 3

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