P05186 (PPBT_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 163.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Alkaline phosphatase, tissue-nonspecific isozyme Short name=AP-TNAP Short name=TNSALP EC=3.1.3.1 Alternative name(s): Alkaline phosphatase liver/bone/kidney isozyme | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 524 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | This isozyme may play a role in skeletal mineralization. |
| Catalytic activity | A phosphate monoester + H2O = an alcohol + phosphate. |
| Cofactor | Binds 1 magnesium ion By similarity. Binds 2 zinc ions By similarity. |
| Subunit structure | Homodimer. |
| Subcellular location | |
| Post-translational modification | Glycosylated. Ref.11 |
| Involvement in disease | Hypophosphatasia (HOPS) [MIM:146300]: A metabolic bone disease characterized by defective skeletal mineralization and biochemically by deficient activity of the tissue non-specific isoenzyme of alkaline phosphatase. Four forms are distinguished, depending on the age of onset: perinatal, infantile, childhood and adult type. The perinatal form is the most severe and is almost always fatal. The adult form is mild and characterized by recurrent fractures, osteomalacia, rickets, and loss of teeth. Some cases are asymptomatic, while some patients manifest dental features without skeletal manifestations (odontohypophosphatasia). Hypophosphatasia childhood type (HOPSC) [MIM:241510]: A bone disease characterized by defective skeletal mineralization and biochemically by deficient activity of the tissue non-specific isoenzyme of alkaline phosphatase. Hypophosphatasia infantile type (HOPSI) [MIM:241500]: A severe bone disease characterized by defective skeletal mineralization and biochemically by deficient activity of the tissue non-specific isoenzyme of alkaline phosphatase. Three more or less distinct types of infantile hypophosphatasia can be identified: (1) type 1 with onset in utero or in early postnatal life, craniostenosis, severe skeletal abnormalities, hypercalcemia, and death in the first year or so of life; (2) type 2 with later, more gradual development of symptoms, moderately severe 'rachitic' skeletal changes and premature loss of teeth; (3) type 3 with no symptoms, the condition being determined on routine studies. |
| Sequence similarities | Belongs to the alkaline phosphatase family. |
| Sequence caution | The sequence BAD93051.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. |
Ontologies
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: P05186-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P05186-2) The sequence of this isoform differs from the canonical sequence as follows: 1-99: MISPFLVLAI...DKFPFVALSK → MPWSFRSSTPTWLRMSSCSWEM | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: P05186-3) The sequence of this isoform differs from the canonical sequence as follows: 1-55: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 17 | 17 | Ref.10 Ref.11 | ||||||
| Chain | 18 – 502 | 485 | Alkaline phosphatase, tissue-nonspecific isozyme | PRO_0000024023 | |||||
| Propeptide | 503 – 524 | 22 | Removed in mature form Probable | PRO_0000024024 | |||||
Sites | |||||||||
| Active site | 110 | 1 | Phosphoserine intermediate | ||||||
| Metal binding | 60 | 1 | Magnesium Potential | ||||||
| Metal binding | 60 | 1 | Zinc 2 Potential | ||||||
| Metal binding | 173 | 1 | Magnesium Potential | ||||||
| Metal binding | 332 | 1 | Magnesium Potential | ||||||
| Metal binding | 337 | 1 | Zinc 1 Potential | ||||||
| Metal binding | 341 | 1 | Zinc 1 Potential | ||||||
| Metal binding | 378 | 1 | Zinc 2 Potential | ||||||
| Metal binding | 379 | 1 | Zinc 2 Potential | ||||||
| Metal binding | 454 | 1 | Zinc 1 Potential | ||||||
Amino acid modifications | |||||||||
| Lipidation | 502 | 1 | GPI-anchor amidated serine Probable | ||||||
| Glycosylation | 140 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 230 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 271 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 303 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 430 | 1 | N-linked (GlcNAc...) Ref.14 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 99 | 99 | MISPF…VALSK → MPWSFRSSTPTWLRMSSCSW EM in isoform 2. | VSP_042711 | |||||
| Alternative sequence | 1 – 55 | 55 | Missing in isoform 3. | VSP_044228 | |||||
| Natural variant | 17 | 1 | S → F in HOPS. Ref.21 | VAR_025903 | |||||
| Natural variant | 28 | 1 | Y → C in HOPS; infantile; 7% of activity. Ref.30 | VAR_013972 | |||||
| Natural variant | 33 | 1 | A → V in HOPS; 7.2% of wild-type activity. Ref.17 Ref.38 | VAR_006147 | |||||
| Natural variant | 40 | 1 | A → V in HOPS; 2% of activity. Ref.21 Ref.23 Ref.26 Ref.29 Ref.30 | VAR_011081 | |||||
| Natural variant | 51 | 1 | A → S in HOPS. Ref.34 | VAR_025904 | |||||
| Natural variant | 51 | 1 | A → V in HOPS. Ref.30 | VAR_013973 | |||||
| Natural variant | 62 | 1 | M → L in HOPS; moderate; 27% of activity. Ref.23 Ref.24 | VAR_006148 | |||||
| Natural variant | 62 | 1 | M → V in HOPS. Ref.35 | VAR_025905 | |||||
| Natural variant | 63 | 1 | G → R in HOPS. Ref.35 | VAR_025906 | |||||
| Natural variant | 63 | 1 | G → V in HOPS; loss of activity. Ref.29 | VAR_013974 | |||||
| Natural variant | 68 | 1 | T → M in HOPS; childhood-type; severe allele. Ref.31 | VAR_025907 | |||||
| Natural variant | 71 | 1 | R → C in HOPS. Ref.17 | VAR_006149 | |||||
| Natural variant | 71 | 1 | R → H in HOPS. Ref.30 Ref.34 | VAR_013975 | |||||
| Natural variant | 71 | 1 | R → P in HOPS. Ref.17 | VAR_006150 | |||||
| Natural variant | 71 | 1 | R → S in HOPS; childhood-type; severe allele. Ref.31 | VAR_025908 | |||||
| Natural variant | 75 | 1 | G → S in HOPS; severe; 3.5% of activity. Ref.21 Ref.23 | VAR_013976 | |||||
| Natural variant | 76 | 1 | Q → R in HOPS. | VAR_025909 | |||||
| Natural variant | 108 | 1 | P → L in HOPS; 0.4% of wild-type activity; severe allele. Ref.36 Corresponds to variant rs28933975 [ dbSNP | Ensembl ]. | VAR_025910 | |||||
| Natural variant | 111 | 1 | A → T in HOPS; odonto. Ref.22 Ref.23 Ref.26 Ref.34 Ref.35 | VAR_006151 | |||||
| Natural variant | 114 | 1 | A → G in HOPS. Ref.37 | VAR_025911 | |||||
| Natural variant | 116 | 1 | A → T in HOPS; loss of activity. Ref.29 Ref.30 Ref.36 Corresponds to variant rs28933974 [ dbSNP | Ensembl ]. | VAR_013977 | |||||
| Natural variant | 120 | 1 | G → R in HOPS. Ref.21 Ref.23 | VAR_013978 | |||||
| Natural variant | 128 | 1 | V → M in HOPS. Ref.34 | VAR_025912 | |||||
| Natural variant | 129 | 1 | G → R in HOPS. Ref.21 Ref.23 | VAR_013979 | |||||
| Natural variant | 132 | 1 | A → V in HOPS. Ref.32 | VAR_013146 | |||||
| Natural variant | 134 | 1 | T → H in HOPS; requires 2 nucleotide substitutions. Ref.34 | VAR_025913 | |||||
| Natural variant | 134 | 1 | T → N in HOPS; 9% of activity. Ref.26 | VAR_011082 | |||||
| Natural variant | 136 | 1 | R → H in HOPS; moderate; 33% of activity. Ref.23 Ref.24 Ref.30 Ref.34 Ref.38 | VAR_006152 | |||||
| Natural variant | 148 | 1 | T → I in HOPS. Ref.35 | VAR_025914 | |||||
| Natural variant | 152 | 1 | R → H in HOPS. Ref.6 Ref.30 | VAR_013980 | |||||
| Natural variant | 162 | 1 | G → S in HOPS. Ref.35 | VAR_025915 | |||||
| Natural variant | 162 | 1 | G → V in HOPS; severe; 1% of activity. Ref.23 Ref.24 | VAR_006153 | |||||
| Natural variant | 170 | 1 | N → D in HOPS. Ref.21 Ref.23 | VAR_013981 | |||||
| Natural variant | 171 | 1 | H → R in HOPS. | VAR_025916 | |||||
| Natural variant | 171 | 1 | H → Y in HOPS; severe; 2% of activity. Ref.23 Ref.24 | VAR_006154 | |||||
| Natural variant | 176 | 1 | A → T in HOPS. Ref.26 Ref.30 Ref.34 | VAR_011083 | |||||
| Natural variant | 177 | 1 | A → T in HOPS; adult type; moderate allele. Ref.22 Ref.31 | VAR_006155 | |||||
| Natural variant | 179 | 1 | A → T in HOPS. Ref.16 Ref.30 | VAR_006156 | |||||
| Natural variant | 181 | 1 | S → L in HOPS; 1% of activity. Ref.29 | VAR_013982 | |||||
| Natural variant | 184 | 1 | R → W in HOPS; loss of activity. Ref.21 Ref.23 Ref.29 | VAR_013983 | |||||
| Natural variant | 189 | 1 | D → E in HOPS. Ref.35 | VAR_025917 | |||||
| Natural variant | 191 | 1 | E → G in HOPS; odonto. Ref.22 | VAR_006157 | |||||
| Natural variant | 191 | 1 | E → K in HOPS; moderate; frequent mutation in European countries. Ref.17 Ref.21 Ref.23 Ref.24 Ref.26 Ref.30 Ref.34 | VAR_006158 | |||||
| Natural variant | 201 | 1 | C → Y in HOPS. Ref.24 Ref.26 | VAR_006159 | |||||
| Natural variant | 207 | 1 | Q → P in HOPS. Ref.17 | VAR_006160 | |||||
| Natural variant | 211 | 1 | N → D in HOPS. Ref.30 | VAR_013984 | |||||
| Natural variant | 212 | 1 | I → F in HOPS. | VAR_025918 | |||||
| Natural variant | 220 | 1 | G → A in HOPS. Ref.35 | VAR_025919 | |||||
| Natural variant | 220 | 1 | G → V in HOPS; odonto. Ref.30 | VAR_013985 | |||||
| Natural variant | 223 | 1 | R → Q in HOPS. Ref.34 Ref.38 | VAR_025920 | |||||
| Natural variant | 223 | 1 | R → W in HOPS; 3% of activity; severe allele. Ref.21 Ref.23 Ref.29 Ref.31 Ref.34 Ref.38 | VAR_013986 | |||||
| Natural variant | 224 | 1 | K → E in HOPS; infantile; partial loss of activity. Ref.25 | VAR_011084 | |||||
| Natural variant | 235 | 1 | E → G in HOPS. Ref.30 | VAR_013987 | |||||
| Natural variant | 246 | 1 | R → S in HOPS; 4% of activity. Ref.26 Ref.34 | VAR_011085 | |||||
| Natural variant | 249 | 1 | G → V in HOPS; partial loss of activity. Ref.23 Ref.24 Ref.29 | VAR_013988 | |||||
| Natural variant | 263 | 1 | Y → H Common polymorphism. Ref.3 Ref.9 Ref.17 Ref.21 Ref.34 Corresponds to variant rs3200254 [ dbSNP | Ensembl ]. | VAR_006161 | |||||
| Natural variant | 272 | 1 | R → H in HOPS; 6.8% of wild-type activity. Ref.38 | VAR_025921 | |||||
| Natural variant | 272 | 1 | R → L in HOPS. Ref.35 | VAR_025922 | |||||
| Natural variant | 275 | 1 | L → P in HOPS; childhood-type; severe allele. Ref.31 | VAR_025923 | |||||
| Natural variant | 289 | 1 | L → F in HOPS. Ref.4 | VAR_006162 | |||||
| Natural variant | 291 | 1 | E → K in HOPS; moderate; 8% of activity. Ref.21 Ref.23 Ref.33 | VAR_013989 | |||||
| Natural variant | 292 | 1 | P → T in HOPS; 4% of wild-type activity. Ref.38 | VAR_025924 | |||||
| Natural variant | 293 – 294 | 2 | Missing in HOPS. | VAR_025925 | |||||
| Natural variant | 294 | 1 | D → A in HOPS. Ref.17 Ref.34 Ref.38 | VAR_006163 | |||||
| Natural variant | 294 | 1 | D → Y in HOPS. Ref.30 | VAR_013990 | |||||
| Natural variant | 295 | 1 | M → T in HOPS; 8.5% of wild-type activity. Ref.38 | VAR_025926 | |||||
| Natural variant | 297 | 1 | Y → D in HOPS; 1.3% of wild-type activity. Ref.38 | VAR_025927 | |||||
| Natural variant | 298 | 1 | E → K in HOPS. Ref.19 | VAR_025928 | |||||
| Natural variant | 299 | 1 | L → P in HOPS. Ref.34 | VAR_025929 | |||||
| Natural variant | 306 | 1 | D → V in HOPS. Ref.23 Ref.24 | VAR_006164 | |||||
| Natural variant | 311 | 1 | E → K in HOPS. Ref.35 | VAR_025930 | |||||
| Natural variant | 326 | 1 | G → R in HOPS; in a patient carrying also K-291. Ref.33 | VAR_013991 | |||||
| Natural variant | 327 | 1 | F → G in HOPS; requires 2 nucleotide substitutions. Ref.30 | VAR_013992 | |||||
| Natural variant | 327 | 1 | F → L in HOPS; childhood. Ref.20 Ref.22 | VAR_006165 | |||||
| Natural variant | 327 | 1 | Missing in HOPS. Ref.34 | VAR_025931 | |||||
| Natural variant | 334 | 1 | G → D in HOPS. Ref.18 Ref.21 Ref.23 Ref.38 | VAR_006166 | |||||
| Natural variant | 339 | 1 | G → R in HOPS. Ref.34 | VAR_025932 | |||||
| Natural variant | 348 | 1 | A → T in HOPS. Ref.26 Ref.34 | VAR_011086 | |||||
| Natural variant | 354 | 1 | E → D in HOPS. | VAR_025933 | |||||
| Natural variant | 378 | 1 | D → V in HOPS; loss of activity. Ref.17 Ref.27 Ref.29 Ref.34 | VAR_006167 | |||||
| Natural variant | 381 | 1 | H → R in HOPS. Ref.26 | VAR_011087 | |||||
| Natural variant | 382 | 1 | V → I in HOPS. Ref.22 | VAR_006168 | |||||
| Natural variant | 391 | 1 | R → C in HOPS; moderate; 10% of activity. Ref.23 | VAR_013993 | |||||
| Natural variant | 391 | 1 | R → H in HOPS; childhood-type; severyye allele. Ref.31 | VAR_025934 | |||||
| Natural variant | 399 | 1 | A → S in HOPS. Ref.30 | VAR_013994 | |||||
| Natural variant | 406 | 1 | D → G in HOPS; 15% of activity. Ref.26 | VAR_011088 | |||||
| Natural variant | 411 | 1 | T → A in HOPS; absence of residual enzymatic activity. Ref.38 | VAR_025935 | |||||
| Natural variant | 414 | 1 | L → M in HOPS. Ref.34 Ref.36 | VAR_025936 | |||||
| Natural variant | 417 | 1 | N → S in HOPS. Ref.28 | VAR_025937 | |||||
| Natural variant | 423 | 1 | V → A in HOPS; 16% of activity. Ref.30 | VAR_013995 | |||||
| Natural variant | 426 | 1 | G → C in HOPS; infantile; partial loss of activity. Ref.25 | VAR_011089 | |||||
| Natural variant | 426 | 1 | G → D in HOPS. Ref.34 | VAR_025938 | |||||
| Natural variant | 436 | 1 | Y → H in HOPS. Ref.17 | VAR_006169 | |||||
| Natural variant | 445 | 1 | S → P in HOPS; severe; 2% of activity. Ref.21 Ref.23 | VAR_013996 | |||||
| Natural variant | 450 | 1 | R → C in HOPS; severe; 4% of activity. Ref.21 Ref.23 | VAR_013997 | |||||
| Natural variant | 450 | 1 | R → H in HOPS. Ref.26 | VAR_011090 | |||||
| Natural variant | 452 | 1 | E → K in HOPS. Ref.35 | VAR_025939 | |||||
| Natural variant | 456 | 1 | G → R in HOPS; loss of activity. Ref.20 | VAR_011091 | |||||
| Natural variant | 459 | 1 | V → M in HOPS; infantile. Ref.30 | VAR_013998 | |||||
| Natural variant | 468 | 1 | A → T in HOPS. Ref.35 | VAR_025940 | |||||
| Natural variant | 473 | 1 | G → S in HOPS. Ref.21 Ref.23 | VAR_013999 | |||||
| Natural variant | 476 | 1 | E → K in HOPS. Ref.23 Ref.24 Ref.34 | VAR_006170 | |||||
| Natural variant | 478 | 1 | N → I in HOPS; 9% of activity. Ref.26 Ref.29 | VAR_011092 | |||||
| Natural variant | 489 | 1 | C → S in HOPS; 9% of activity. Ref.26 | VAR_011093 | |||||
| Natural variant | 490 | 1 | I → F in HOPS; odonto; partial loss of activity. Ref.29 | VAR_014000 | |||||
| Natural variant | 491 | 1 | G → R in HOPS. Ref.21 Ref.23 | VAR_014001 | |||||
| Natural variant | 522 | 1 | V → A. Ref.27 Ref.31 Ref.34 Corresponds to variant rs34605986 [ dbSNP | Ensembl ]. | VAR_011094 | |||||
Experimental info | |||||||||
| Sequence conflict | 29 | 1 | W → A AA sequence Ref.10 | ||||||
| Sequence conflict | 104 | 1 | N → K in CAA32376. Ref.3 | ||||||
| Sequence conflict | 361 | 1 | Q → H in BAA32129. Ref.1 | ||||||
| Sequence conflict | 446 | 1 | A → P in BAA32129. Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Isolation and characterization of a cDNA encoding a human liver/bone/kidney-type alkaline phosphatase." Weiss M.J., Henthorn P.S., Lafferty M.A., Slaughter C., Raducha M., Harris H. Proc. Natl. Acad. Sci. U.S.A. 83:7182-7186(1986) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Osteosarcoma. |
| [2] | "Structure of the human liver/bone/kidney alkaline phosphatase gene." Weiss M.J., Ray K., Henthorn P.S., Lamb B., Kadesch T., Harris H. J. Biol. Chem. 263:12002-12010(1988) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Tissue: Osteosarcoma. |
| [3] | "Nucleotide sequence of the human liver-type alkaline phosphatase cDNA." Kishi F., Matsuura S., Kajii T. Nucleic Acids Res. 17:2129-2129(1989) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANT HIS-263. Tissue: Liver. |
| [4] | "A novel missense mutation of the tissue-nonspecific alkaline phosphatase gene detected in a patient with hypophosphatasia." Sugimoto N., Iwamoto S., Hoshino Y., Kajii E. J. Hum. Genet. 43:160-164(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANT HOPS PHE-289. |
| [5] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 2 AND 3). Tissue: Hippocampus. |
| [6] | Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANT HIS-152. Tissue: Brain. |
| [7] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [8] | Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [9] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANT HIS-263. Tissue: Brain, Cerebellum, Lymphoma and Peripheral nerve. |
| [10] | "Human liver alkaline phosphatase, purification and partial sequencing: homology with the placental isozyme." Garattini E., Hua J.-C., Pan Y.C.E., Udenfriend S. Arch. Biochem. Biophys. 245:331-337(1986) [PubMed] [Europe PMC] [Abstract] Cited for: PROTEIN SEQUENCE OF 18-49. Tissue: Liver. |
| [11] | "Chemical nature of intestinal-type alkaline phosphatase in human kidney." Nishihara Y., Hayashi Y., Adachi T., Koyama I., Stigbrand T., Hirano K. Clin. Chem. 38:2539-2542(1992) [PubMed] [Europe PMC] [Abstract] Cited for: PROTEIN SEQUENCE OF 18-32, GLYCOSYLATION. |
| [12] | "Proteomic analysis of glycosylphosphatidylinositol-anchored membrane proteins." Elortza F., Nuehse T.S., Foster L.J., Stensballe A., Peck S.C., Jensen O.N. Mol. Cell. Proteomics 2:1261-1270(2003) [PubMed] [Europe PMC] [Abstract] Cited for: GPI-ANCHOR [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [13] | "Modification-specific proteomics of plasma membrane proteins: identification and characterization of glycosylphosphatidylinositol-anchored proteins released upon phospholipase D treatment." Elortza F., Mohammed S., Bunkenborg J., Foster L.J., Nuehse T.S., Brodbeck U., Peck S.C., Jensen O.N. J. Proteome Res. 5:935-943(2006) [PubMed] [Europe PMC] [Abstract] Cited for: GPI-ANCHOR [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [14] | "Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry." Chen R., Jiang X., Sun D., Han G., Wang F., Ye M., Wang L., Zou H. J. Proteome Res. 8:651-661(2009) [PubMed] [Europe PMC] [Abstract] Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-430, MASS SPECTROMETRY. Tissue: Liver. |
| [15] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [16] | "A missense mutation in the human liver/bone/kidney alkaline phosphatase gene causing a lethal form of hypophosphatasia." Weiss M.J., Cole D.E.C., Ray K., Whyte M.P., Lafferty M.A., Mulivor R.A., Harris H. Proc. Natl. Acad. Sci. U.S.A. 85:7666-7669(1988) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT HOPS THR-179. |
| [17] | "Different missense mutations at the tissue-nonspecific alkaline phosphatase gene locus in autosomal recessively inherited forms of mild and severe hypophosphatasia." Henthorn P.S., Raducha M., Fedde K.N., Lafferty M.A., Whyte M.P. Proc. Natl. Acad. Sci. U.S.A. 89:9924-9928(1992) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS VAL-33; CYS-71; PRO-71; LYS-191; PRO-207; ALA-294; VAL-378 AND HIS-436, VARIANT HIS-263. |
| [18] | "A homoallelic Gly317-->Asp mutation in ALPL causes the perinatal (lethal) form of hypophosphatasia in Canadian mennonites." Greenberg C.R., Taylor C.L., Haworth J.C., Seargeant L.E., Philipps S., Triggs-Raine B., Chodirker B.N. Genomics 17:215-217(1993) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT HOPS ASP-334. |
| [19] | "Novel missense and frameshift mutations in the tissue-nonspecific alkaline phosphatase gene in a Japanese patient with hypophosphatasia." Orimo H., Hayashi Z., Watanabe A., Hirayama T., Hirayama T., Shimada T. Hum. Mol. Genet. 3:1683-1684(1994) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT HOPS LYS-298. |
| [20] | "Identification of novel missense mutations (Phe310Leu and Gly439Arg) in a neonatal case of hypophosphatasia." Ozono K., Yamagata M., Michigami T., Nakajima S., Sakai N., Cai G., Satomura K., Yasui N., Okada S., Nakayama M. J. Clin. Endocrinol. Metab. 81:4458-4461(1996) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS LEU-327 AND ARG-456. |
| [21] | "Identification of fifteen novel mutations in the tissue-nonspecific alkaline phosphatase (TNSALP) gene in European patients with severe hypophosphatasia." Mornet E., Taillandier A., Peyramaure S., Kaper F., Muller F., Brenner R., Bussiere P., Freisinger P., Godard J., Le Merrer M., Oury J.F., Plauchu H., Puddu R., Rival J.M., Superti-Furga A., Touraine R.L., Serre J.L., Simon-Bouy B. Eur. J. Hum. Genet. 6:308-314(1998) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS PHE-17; VAL-40; SER-75; ARG-120; ARG-129; ASP-170; TRP-184; LYS-191; TRP-223; LYS-291; ASP-334; PRO-445; CYS-450; SER-473 AND ARG-491, VARIANT HIS-263. |
| [22] | "Hypophosphatasia: identification of five novel missense mutations (G507A, G705A, A748G, T1155C, G1320A) in the tissue-nonspecific alkaline phosphatase gene among Japanese patients." Goseki-Sone M., Orimo H., Iimura T., Takagi Y., Watanabe H., Taketa K., Sato S., Mayanagi H., Shimada T., Oida S. Hum. Mutat. Suppl. 1:S263-S267(1998) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS THR-111; THR-177; GLY-191; LEU-327 AND ILE-382. |
| [23] | "Correlations of genotype and phenotype in hypophosphatasia." Zurutuza L., Muller F., Gibrat J.F., Taillandier A., Simon-Bouy B., Serre J.L., Mornet E. Hum. Mol. Genet. 8:1039-1046(1999) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS VAL-40; LEU-62; SER-75; THR-111; ARG-120; ARG-129; HIS-136; VAL-162; ASP-170; TYR-171; TRP-184; LYS-191; TRP-223; VAL-249; LYS-291; VAL-306; ASP-334; CYS-391; PRO-445; CYS-450; SER-473; LYS-476 AND ARG-491, 3D-STRUCTURE MODELING, CHARACTERIZATION OF VARIANTS. |
| [24] | "Characterization of eleven novel mutations (M45L, R119H, 544delG, G145V, H154Y, C184Y, D289V, 862+5A, 1172delC, R411X, E459K) in the tissue-nonspecific alkaline phosphatase (TNSALP) gene in patients with severe hypophosphatasia." Taillandier A., Zurutuza L., Muller F., Simon-Bouy B., Serre J.L., Bird L., Brenner R., Boute O., Cousin J., Gaillard D., Heidemann P.H., Steinmann B., Wallot M., Mornet E. Hum. Mutat. 13:171-172(1999) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS LEU-62; HIS-136; VAL-162; TYR-171; LYS-191; TYR-201; VAL-249; VAL-306 AND LYS-476. |
| [25] | "Severe hypercalcaemia and respiratory insufficiency associated with infantile hypophosphatasia caused by two novel mutations of the tissue-nonspecific alkaline phosphatase gene." Mochizuki H., Saito M., Michigami T., Ohashi H., Koda N., Yamaguchi S., Ozono K. Eur. J. Pediatr. 159:375-379(2000) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS GLU-224 AND CYS-426. |
| [26] | "Fifteen new mutations (-195C>T, L-12X, 298-2A>G, T117N, A159T, R229S, 997+2T>A, E274X, A331T, H364R, D389G, 1256delC, R433H, N461I, C472S) in the tissue-nonspecific alkaline phosphatase (TNSALP) gene in patients with hypophosphatasia." Taillandier A., Cozien E., Muller F., Merrien Y., Bonnin E., Fribourg C., Simon-Bouy B., Serre J.L., Bieth E., Brenner R., Cordier M.P., De Bie S., Fellmann F., Freisinger P., Hesse V., Hennekam R.C.M., Josifova D., Kerzin-Storrar L. Mornet E.Hum. Mutat. 15:293-293(2000) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS VAL-40; THR-111; ASN-134; THR-176; LYS-191; TYR-201; SER-246; THR-348; ARG-381; GLY-406; HIS-450; ILE-478 AND SER-489. |
| [27] | "Asp361Val mutant of alkaline phosphatase found in patients with dominantly inherited hypophosphatasia inhibits the activity of the wild-type enzyme." Mueller H.L., Yamazaki M., Michigami T., Kageyama T., Schoenau E., Schneider P., Ozono K. J. Clin. Endocrinol. Metab. 85:743-747(2000) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT HOPS VAL-378, VARIANT ALA-522. |
| [28] | "Perinatal hypophosphatasia: radiology, pathology and molecular biology studies in a family harboring a splicing mutation (648+1A) and a novel missense mutation (N400S) in the tissue-nonspecific alkaline phosphatase (TNSALP) gene." Sergi C., Mornet E., Troeger J., Voigtlaender T. Am. J. Med. Genet. 103:235-240(2001) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT HOPS SER-417. |
| [29] | "A molecular approach to dominance in hypophosphatasia." Lia-Baldini A.S., Muller F., Taillandier A., Gibrat J.F., Mouchard M., Robin B., Simon-Bouy B., Serre J.L., Aylsworth A.S., Bieth E., Delanote S., Freisinger P., Hu J.C.-C., Krohn H.-P., Nunes M.E., Mornet E. Hum. Genet. 109:99-108(2001) [PubMed] [Europe PMC] [Abstract] Cited for: CHARACTERIZATION OF VARIANTS HOPS VAL-40; VAL-63; THR-116; LEU-181; TRP-184; TRP-223; VAL-249; VAL-378; ILE-478 AND PHE-490. |
| [30] | "Twelve novel mutations in the tissue-nonspecific alkaline phosphatase gene (ALPL) in patients with various forms of hypophosphatasia." Taillandier A., Lia-Baldini A.S., Mouchard M., Robin B., Muller F., Simon-Bouy B., Serre J.L., Bera-Louville A., Bonduelle M., Eckhardt J., Gaillard D., Myhre A.G., Koertge-Jung S., Larget-Piet L., Malou E., Sillence D., Temple I.K., Viot G., Mornet E. Hum. Mutat. 18:83-84(2001) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS CYS-28; VAL-40; VAL-51; HIS-71; THR-116; HIS-136; HIS-152; THR-176; THR-179; LYS-191; ASP-211; VAL-220; GLY-235; TYR-294; GLY-327; SER-399; ALA-423 AND MET-459. |
| [31] | "Mutational analysis and functional correlation with phenotype in German patients with childhood-type hypophosphatasia." Orimo H., Girschick H.J., Goseki-Sone M., Ito M., Oda K., Shimada T. J. Bone Miner. Res. 16:2313-2319(2001) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS MET-68; SER-71; THR-177; TRP-223; PRO-275 AND HIS-391, CHARACTERIZATION OF VARIANTS HOPS MET-68; SER-71; THR-177; TRP-223; PRO-275 AND HIS-391, VARIANT ALA-522, CHARACTERIZATION OF VARIANT ALA-522. |
| [32] | "A novel point mutation (C571T) in the tissue-non-specific alkaline phosphatase gene in a case of adult-type hypophosphatasia." Watanabe H., Hashimoto-Uoshima M., Goseki-Sone M., Orimo H., Ishikawa I. Oral Dis. 7:331-335(2001) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT HOPS VAL-132. |
| [33] | "Glu274Lys/Gly309Arg mutation of the tissue-nonspecific alkaline phosphatase gene in neonatal hypophosphatasia associated with convulsions." Litmanovitz I., Reish O., Dolfin T., Arnon S., Regev R., Grinshpan G., Yamazaki M., Ozono K. J. Inherit. Metab. Dis. 25:35-40(2002) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS LYS-291 AND ARG-326. |
| [34] | "Denaturing gradient gel electrophoresis analysis of the tissue nonspecific alkaline phosphatase isoenzyme gene in hypophosphatasia." Mumm S., Jones J., Finnegan P., Henthorn P.S., Podgornik M.N., Whyte M.P. Mol. Genet. Metab. 75:143-153(2002) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS SER-51; HIS-71; THR-111; MET-128; HIS-134; HIS-136; THR-176; LYS-191; GLN-223; TRP-223; SER-246; ALA-294; PRO-299; PHE-327 DEL; ARG-339; THR-348; VAL-378; MET-414; ASP-426 AND LYS-476, VARIANTS HIS-263 AND ALA-522. |
| [35] | "Severe hypophosphatasia: characterization of fifteen novel mutations in the ALPL gene." Spentchian M., Merrien Y., Herasse M., Dobbie Z., Glaeser D., Holder S.E., Ivarsson S.-A., Kostiner D., Mansour S., Norman A., Roth J., Stipoljev F., Taillemite J.-L., van der Smagt J.J., Serre J.-L., Simon-Bouy B., Taillandier A., Mornet E. Hum. Mutat. 22:105-106(2003) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS VAL-62; ARG-63; THR-111; ILE-148; SER-162; GLU-189; ALA-220; LEU-272; GLY-293-294-ASP DEL; LYS-311; LYS-452 AND THR-468. |
| [36] | "Molecular study of three cases of odontohypophosphatasia resulting from heterozygosity for mutations in the tissue non-specific alkaline phosphatase gene." Herasse M., Spentchian M., Taillandier A., Keppler-Noreuil K., Fliorito A.N.M., Bergoffen J., Wallerstein R., Muti C., Simon-Bouy B., Mornet E. J. Med. Genet. 40:605-609(2003) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS LEU-108; THR-116 AND MET-414, CHARACTERIZATION OF VARIANT HOPS LEU-108. |
| [37] | "Childhood hypophosphatasia: a case report due to a novel mutation." Draguet C., Gillerot Y., Mornet E. Arch. Pediatr. 11:440-443(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT HOPS GLY-114. |
| [38] | "Characterization of 11 novel mutations in the tissue non-specific alkaline phosphatase gene responsible for hypophosphatasia and genotype-phenotype correlations." Brun-Heath I., Taillandier A., Serre J.-L., Mornet E. Mol. Genet. Metab. 84:273-277(2005) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HOPS VAL-33; HIS-136; GLN-223; TRP-223; HIS-272; THR-292; ALA-294; THR-295; ASP-297; ASP-334 AND ALA-411, CHARACTERIZATION OF VARIANTS HOPS VAL-33; HIS-272; THR-292; THR-295; ASP-297 AND ALA-411. |
| + | Additional computationally mapped references. |
Web resources
| ALPL Tissue nonspecific alkaline phosphatase gene mutations database |
| GeneReviews |
| Wikipedia Alkaline phosphatase entry |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | M24439 M24438 Genomic DNA. Translation: AAB59378.1.X14174 mRNA. Translation: CAA32376.1. AB011406 mRNA. Translation: BAA32129.1. AK295608 mRNA. Translation: BAH12123.1. AK298085 mRNA. Translation: BAH12722.1. AB209814 mRNA. Translation: BAD93051.1. Different initiation. AL592309, AL359815 Genomic DNA. Translation: CAH72079.1. AL359815, AL592309 Genomic DNA. Translation: CAI16259.1. CH471134 Genomic DNA. Translation: EAW94977.1. BC021289 mRNA. Translation: AAH21289.3. BC066116 mRNA. Translation: AAH66116.2. BC090861 mRNA. Translation: AAH90861.2. BC110909 mRNA. Translation: AAI10910.2. BC126165 mRNA. Translation: AAI26166.1. BC136325 mRNA. Translation: AAI36326.1. |
| IPI | IPI00419916. IPI00643764. |
| PIR | PAHUH. S03613. |
| RefSeq | NP_000469.3. NM_000478.4. NP_001120973.2. NM_001127501.2. NP_001170991.1. NM_001177520.1. |
| UniGene | Hs.75431. |
3D structure databases | |
| ProteinModelPortal | P05186. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P05186. 1 interaction. |
PTM databases | |
| PhosphoSite | P05186. |
Polymorphism databases | |
| DMDM | 68067533. |
Proteomic databases | |
| PaxDb | P05186. |
| PeptideAtlas | P05186. |
| PRIDE | P05186. |
Protocols and materials databases | |
| DNASU | 249. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000374832; ENSP00000363965; ENSG00000162551. ENST00000374840; ENSP00000363973; ENSG00000162551. ENST00000425315; ENSP00000394765; ENSG00000162551. ENST00000539907; ENSP00000437674; ENSG00000162551. ENST00000540617; ENSP00000442672; ENSG00000162551. |
| GeneID | 249. |
| KEGG | hsa:249. |
| UCSC | uc001bet.3. human. |
Organism-specific databases | |
| CTD | 249. |
| GeneCards | GC01P021835. |
| HGNC | HGNC:438. ALPL. |
| HPA | CAB020829. HPA007105. HPA008765. |
| MIM | 146300. phenotype. 171760. gene. 241500. phenotype. 241510. phenotype. |
| neXtProt | NX_P05186. |
| Orphanet | 247676. Adult hypophosphatasia. 247667. Childhood-onset hypophosphatasia. 247651. Infantile hypophosphatasia. 247685. Odontohypophosphatasia. 247623. Perinatal lethal hypophosphatasia. 247638. Prenatal benign hypophosphatasia. |
| PharmGKB | PA24729. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG1785. |
| HOVERGEN | HBG007345. |
| InParanoid | P05186. |
| KO | K01077. |
| OMA | MVTGVKT. |
| OrthoDB | EOG4NGGMN. |
| PhylomeDB | P05186. |
Enzyme and pathway databases | |
| BRENDA | 3.1.3.1. 2681. |
Gene expression databases | |
| ArrayExpress | P05186. |
| Bgee | P05186. |
| Genevestigator | P05186. |
| GermOnline | ENSG00000162551. Homo sapiens. |
Family and domain databases | |
| Gene3D | 3.40.720.10. 1 hit. |
| InterPro | IPR017849. Alkaline_Pase-like_a/b/a. IPR001952. Alkaline_phosphatase. IPR018299. Alkaline_phosphatase_AS. IPR017850. Alkaline_phosphatase_core. [Graphical view] |
| Pfam | PF00245. Alk_phosphatase. 1 hit. [Graphical view] |
| PRINTS | PR00113. ALKPHPHTASE. |
| SMART | SM00098. alkPPc. 1 hit. [Graphical view] |
| SUPFAM | SSF53649. Alkaline_phosphatase_core. 1 hit. |
| PROSITE | PS00123. ALKALINE_PHOSPHATASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| BindingDB | P05186. |
| ChEMBL | CHEMBL5979. |
| DrugBank | DB01143. Amifostine. |
| GenomeRNAi | 249. |
| NextBio | 997. |
| SOURCE | Search... |
Entry information
| Entry name | PPBT_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P05186 Secondary accession number(s): A1A4E7 Q9UBK0 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
