Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Nucleoprotein

Gene

N

Organism
Hantaan virus (strain 76-118) (Korean hemorrhagic fever virus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiHantaan virus (strain 76-118) (Korean hemorrhagic fever virus)
Taxonomic identifieri11602 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA negative-strand virusesBunyaviridaeHantavirus
Virus hostiApodemus agrarius (Eurasian field mouse) [TaxID: 39030]
Homo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000008627 Componenti: Genome

Subcellular locationi

  • Virion

  • Note: Internal protein of virus particle.

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002220091 – 429NucleoproteinAdd BLAST429

Structurei

Secondary structure

1429
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi4 – 34Combined sources31
Helixi38 – 70Combined sources33
Helixi119 – 128Combined sources10
Helixi131 – 141Combined sources11
Turni142 – 144Combined sources3
Beta strandi156 – 159Combined sources4
Beta strandi177 – 180Combined sources4
Beta strandi184 – 186Combined sources3
Helixi195 – 205Combined sources11
Helixi208 – 213Combined sources6
Turni218 – 220Combined sources3
Helixi221 – 223Combined sources3
Helixi226 – 230Combined sources5
Helixi232 – 241Combined sources10
Beta strandi246 – 248Combined sources3
Helixi262 – 276Combined sources15
Helixi279 – 290Combined sources12
Beta strandi298 – 301Combined sources4
Helixi325 – 346Combined sources22
Helixi361 – 370Combined sources10
Helixi378 – 394Combined sources17
Helixi404 – 420Combined sources17

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4FI5X-ray2.20A3-93[»]
5FSGX-ray3.21A113-429[»]
ProteinModelPortaliP05133.
SMRiP05133.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR002214. Hanta_nucleocap.
[Graphical view]
PfamiPF00846. Hanta_nucleocap. 1 hit.
[Graphical view]
PIRSFiPIRSF003949. N_HantaV. 1 hit.
ProDomiPD001501. Hanta_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P05133-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATMEELQRE INAHEGQLVI ARQKVRDAEK QYEKDPDELN KRTLTDREGV
60 70 80 90 100
AVSIQAKIDE LKRQLADRIA TGKNLGKEQD PTGVEPGDHL KERSMLSYGN
110 120 130 140 150
VLDLNHLDID EPTGQTADWL SIIVYLTSFV VPILLKALYM LTTRGRQTTK
160 170 180 190 200
DNKGTRIRFK DDSSFEDVNG IRKPKHLYVS LPNAQSSMKA EEITPGRYRT
210 220 230 240 250
AVCGLYPAQI KARQMISPVM SVIGFLALAK DWSDRIEQWL IEPCKLLPDT
260 270 280 290 300
AAVSLLGGPA TNRDYLRQRQ VALGNMETKE SKAIRQHAEA AGCSMIEDIE
310 320 330 340 350
SPSSIWVFAG APDRCPPTCL FIAGIAELGA FFSILQDMRN TIMASKTVGT
360 370 380 390 400
SEEKLRKKSS FYQSYLRRTQ SMGIQLGQRI IVLFMVAWGK EAVDNFHLGD
410 420
DMDPELRTLA QSLIDVKVKE ISNQEPLKL
Length:429
Mass (Da):48,142
Last modified:August 13, 1987 - v1
Checksum:iDD3B12CB24BC9EC7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M14626 Genomic RNA. Translation: AAA43837.1.
PIRiA25617. VHVUHV.
RefSeqiNP_941977.1. NC_005218.1.

Genome annotation databases

GeneIDi2943078.
KEGGivg:2943078.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M14626 Genomic RNA. Translation: AAA43837.1.
PIRiA25617. VHVUHV.
RefSeqiNP_941977.1. NC_005218.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4FI5X-ray2.20A3-93[»]
5FSGX-ray3.21A113-429[»]
ProteinModelPortaliP05133.
SMRiP05133.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi2943078.
KEGGivg:2943078.

Family and domain databases

InterProiIPR002214. Hanta_nucleocap.
[Graphical view]
PfamiPF00846. Hanta_nucleocap. 1 hit.
[Graphical view]
PIRSFiPIRSF003949. N_HantaV. 1 hit.
ProDomiPD001501. Hanta_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Entry informationi

Entry nameiNCAP_HANTV
AccessioniPrimary (citable) accession number: P05133
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 13, 1987
Last sequence update: August 13, 1987
Last modified: November 30, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.