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Protein

40S ribosomal protein S17

Gene

Rps17

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S17
Gene namesi
Name:Rps17
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 8

Organism-specific databases

RGDi62027. Rps17.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001415281 – 13540S ribosomal protein S17Add BLAST135

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei19N6-succinyllysineBy similarity1
Cross-linki103Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1)By similarity
Cross-linki103Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity
Modified residuei113PhosphoserineBy similarity1
Modified residuei130PhosphothreonineBy similarity1

Keywords - PTMi

Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDbiP04644.
PRIDEiP04644.

PTM databases

iPTMnetiP04644.
PhosphoSitePlusiP04644.

Expressioni

Gene expression databases

BgeeiENSRNOG00000045885.
GenevisibleiP04644. RN.

Interactioni

Protein-protein interaction databases

BioGridi247956. 1 interactor.
IntActiP04644. 1 interactor.
STRINGi10116.ENSRNOP00000064320.

Structurei

3D structure databases

ProteinModelPortaliP04644.
SMRiP04644.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0187. Eukaryota.
COG1383. LUCA.
GeneTreeiENSGT00390000006548.
HOGENOMiHOG000227166.
HOVERGENiHBG001708.
InParanoidiP04644.
KOiK02962.
OMAiATHLMRR.
OrthoDBiEOG091G0TNU.
PhylomeDBiP04644.
TreeFamiTF317992.

Family and domain databases

Gene3Di1.10.60.20. 1 hit.
HAMAPiMF_00511. Ribosomal_S17e. 1 hit.
InterProiView protein in InterPro
IPR001210. Ribosomal_S17e.
IPR018273. Ribosomal_S17e_CS.
IPR036401. RPS17e-like_sf.
PANTHERiPTHR10732. PTHR10732. 1 hit.
PfamiView protein in Pfam
PF00833. Ribosomal_S17e. 1 hit.
SUPFAMiSSF116820. SSF116820. 1 hit.
PROSITEiView protein in PROSITE
PS00712. RIBOSOMAL_S17E. 1 hit.

Sequencei

Sequence statusi: Complete.

P04644-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRVRTKTVK KAARVIIEKY YTRLGNDFHT NKRVCEEIAI IPSKNLRNKI
60 70 80 90 100
AGYVTHLMKR IQRGPVRGIS IKLQEEERER RDNYVPEVSA LDQEIIEVDP
110 120 130
DTKEMLKLLD FGSLSNLQVT QPTVGMNFKT PRGAV
Length:135
Mass (Da):15,510
Last modified:January 23, 2007 - v3
Checksum:i59F06350C0104620
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti36E → K in AAA42078 (PubMed:3840111).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K02933 mRNA. Translation: AAA42078.1.
BC058484 mRNA. Translation: AAH58484.1.
PIRiA24028. R4RT17.
RefSeqiNP_058848.2. NM_017152.3.
XP_006226597.1. XM_006226535.3.
XP_006243666.1. XM_006243604.2.
UniGeneiRn.6920.

Genome annotation databases

EnsembliENSRNOT00000073068; ENSRNOP00000064320; ENSRNOG00000045885.
GeneIDi100365810.
29286.
KEGGirno:100365810.
rno:29286.
UCSCiRGD:62027. rat.

Similar proteinsi

Entry informationi

Entry nameiRS17_RAT
AccessioniPrimary (citable) accession number: P04644
Secondary accession number(s): Q6PDV2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 13, 1987
Last sequence update: January 23, 2007
Last modified: October 25, 2017
This is version 122 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families