P03875 (AI1M_YEAST) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 91.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Putative COX1/OXI3 intron 1 protein | ||||
| Gene names |
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| Encoded on | Mitochondrion | ||||
| Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||||
| Taxonomic identifier | 559292 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 834 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Subcellular location | Mitochondrion Potential. |
| Miscellaneous | This protein is coded in group-II intron 1 of OXI3 (COX1). |
| Sequence similarities | Contains 1 reverse transcriptase domain. |
| Sequence caution | The sequence CAA24071.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Assembly of the mitochondrial membrane system. Structure and nucleotide sequence of the gene coding for subunit 1 of yeast cytochrome oxidase." Bonitz S.G., Coruzzi G., Thalenfeld B.E., Tzagoloff A., Macino G. J. Biol. Chem. 255:11927-11941(1980) [PubMed: 6254986] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 24657 / D273-10B. |
| [2] | "The primary structure of the mitochondrial genome of Saccharomyces cerevisiae -- a review." de Zamaroczy M., Bernardi G. Gene 47:155-177(1986) [PubMed: 3549452] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [3] | "The complete sequence of the mitochondrial genome of Saccharomyces cerevisiae." Foury F., Roganti T., Lecrenier N., Purnelle B. FEBS Lett. 440:325-331(1998) [PubMed: 9872396] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 96604 / S288c / FY1679. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | V00694 Genomic DNA. Translation: CAA24071.1. Different initiation. L36897 Genomic DNA. Translation: AAA67532.1. AJ011856 Genomic DNA. Translation: CAA09825.1. |
| PIR | QXBY31. A04508. S78642. |
| RefSeq | NP_009310.1. NM_001184353.1. |
3D structure databases | |
| ProteinModelPortal | P03875. |
| SMR | P03875. Positions 2-68. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-8242N. |
| IntAct | P03875. 1 interaction. |
| MINT | MINT-690265. |
| STRING | P03875. |
Protein family/group databases | |
| REBASE | 2622. I-SceIII. |
Proteomic databases | |
| PeptideAtlas | P03875. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblFungi | Q0050; Q0050; Q0050. |
| GeneID | 854593. |
| KEGG | sce:Q0050. |
| NMPDR | fig|4932.3.peg.1861. |
Organism-specific databases | |
| CYGD | Q0050. |
| SGD | S000007261. AI1. |
Phylogenomic databases | |
| eggNOG | fuNOG14462. |
| GeneTree | EFGT00050000008548. |
| HOGENOM | HBG203563. |
| OrthoDB | EOG4HX8BM. |
Gene expression databases | |
| ArrayExpress | P03875. |
| Genevestigator | P03875. |
| GermOnline | Q0050. Saccharomyces cerevisiae. |
Family and domain databases | |
| InterPro | IPR000883. Cyt_c_Oxase_su1. IPR023616. Cyt_c_Oxase_su1_dom. IPR003615. HNH_nuc. IPR000477. RVT. [Graphical view] |
| Gene3D | G3DSA:1.20.210.10. COX1. 1 hit. |
| PANTHER | PTHR10422. COX1. 1 hit. |
| Pfam | PF00078. RVT_1. 1 hit. [Graphical view] |
| SMART | SM00507. HNHc. 1 hit. [Graphical view] |
| SUPFAM | SSF81442. COX1. 1 hit. |
| PROSITE | PS50878. RT_POL. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 977065. |
Entry information
| Entry name | AI1M_YEAST | ||||||||
| Accession | Primary (citable) accession number: P03875 Secondary accession number(s): Q9ZZX5 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Fungal Protein Annotation Program | ||||||||
Relevant documents
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| SIMILARITY comments Index of protein domains and families |

Clusters with