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Protein

Uncharacterized protein YgeA

Gene

ygeA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Enzyme and pathway databases

BioCyciEcoCyc:EG11157-MONOMER.
ECOL316407:JW2808-MONOMER.
RETL1328306-WGS:GSTH-2803-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YgeA
Gene namesi
Name:ygeA
Ordered Locus Names:b2840, JW2808
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11157. ygeA.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 230230Uncharacterized protein YgeAPRO_0000095537Add
BLAST

Proteomic databases

PaxDbiP03813.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
groLP0A6F51EBI-545190,EBI-543750
nudGP777881EBI-545190,EBI-545184

Protein-protein interaction databases

BioGridi4262310. 16 interactions.
DIPiDIP-12147N.
IntActiP03813. 2 interactions.
STRINGi511145.b2840.

Structurei

3D structure databases

ProteinModelPortaliP03813.
SMRiP03813. Positions 1-229.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105CG9. Bacteria.
COG1794. LUCA.
HOGENOMiHOG000262146.
InParanoidiP03813.
OMAiVICTNTM.
OrthoDBiEOG6MWNBG.
PhylomeDBiP03813.

Family and domain databases

Gene3Di3.40.50.1860. 2 hits.
InterProiIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR018187. Asp/Glu_racemase_AS_1.
IPR033134. Asp/Glu_racemase_AS_2.
IPR004380. Asp_race.
[Graphical view]
PfamiPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMiSSF53681. SSF53681. 2 hits.
TIGRFAMsiTIGR00035. asp_race. 1 hit.
PROSITEiPS00923. ASP_GLU_RACEMASE_1. 1 hit.
PS00924. ASP_GLU_RACEMASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P03813-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTIGLLGGM SWESTIPYYR LINEGIKQRL GGLHSAQVLL HSVDFHEIEE
60 70 80 90 100
CQRRGEWDKT GDILAEAALG LQRAGAEGIV LCTNTMHKVA DAIESRCTLP
110 120 130 140 150
FLHIADATGR AITGAGMTRV ALLGTRYTME QDFYRGRLTE QFSINCLIPE
160 170 180 190 200
ADERAKINQI IFEELCLGQF TEASRAYCAQ VIARLAEQGA QGVIFGCTEI
210 220 230
GLLVPEERSV LPVFDTAAIH AEDAVAFMLS
Length:230
Mass (Da):25,248
Last modified:July 21, 1986 - v1
Checksum:i370E9549BD37FF61
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J03732 Genomic DNA. Translation: AAA23470.1.
J01614 Genomic DNA. Translation: AAA83863.1.
U29581 Genomic DNA. Translation: AAB40487.1.
U00096 Genomic DNA. Translation: AAC75879.1.
AP009048 Genomic DNA. Translation: BAE76909.1.
PIRiA04438. QQECK.
RefSeqiNP_417317.1. NC_000913.3.
WP_000848659.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75879; AAC75879; b2840.
BAE76909; BAE76909; BAE76909.
GeneIDi947348.
KEGGiecj:JW2808.
eco:b2840.
PATRICi32121098. VBIEscCol129921_2938.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J03732 Genomic DNA. Translation: AAA23470.1.
J01614 Genomic DNA. Translation: AAA83863.1.
U29581 Genomic DNA. Translation: AAB40487.1.
U00096 Genomic DNA. Translation: AAC75879.1.
AP009048 Genomic DNA. Translation: BAE76909.1.
PIRiA04438. QQECK.
RefSeqiNP_417317.1. NC_000913.3.
WP_000848659.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP03813.
SMRiP03813. Positions 1-229.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262310. 16 interactions.
DIPiDIP-12147N.
IntActiP03813. 2 interactions.
STRINGi511145.b2840.

Proteomic databases

PaxDbiP03813.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75879; AAC75879; b2840.
BAE76909; BAE76909; BAE76909.
GeneIDi947348.
KEGGiecj:JW2808.
eco:b2840.
PATRICi32121098. VBIEscCol129921_2938.

Organism-specific databases

EchoBASEiEB1146.
EcoGeneiEG11157. ygeA.

Phylogenomic databases

eggNOGiENOG4105CG9. Bacteria.
COG1794. LUCA.
HOGENOMiHOG000262146.
InParanoidiP03813.
OMAiVICTNTM.
OrthoDBiEOG6MWNBG.
PhylomeDBiP03813.

Enzyme and pathway databases

BioCyciEcoCyc:EG11157-MONOMER.
ECOL316407:JW2808-MONOMER.
RETL1328306-WGS:GSTH-2803-MONOMER.

Miscellaneous databases

PROiP03813.

Family and domain databases

Gene3Di3.40.50.1860. 2 hits.
InterProiIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR018187. Asp/Glu_racemase_AS_1.
IPR033134. Asp/Glu_racemase_AS_2.
IPR004380. Asp_race.
[Graphical view]
PfamiPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMiSSF53681. SSF53681. 2 hits.
TIGRFAMsiTIGR00035. asp_race. 1 hit.
PROSITEiPS00923. ASP_GLU_RACEMASE_1. 1 hit.
PS00924. ASP_GLU_RACEMASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Regulation of diaminopimelate decarboxylase synthesis in Escherichia coli. III. Nucleotide sequence and regulation of the lysR gene."
    Stragier P., Patte J.-C.
    J. Mol. Biol. 168:333-350(1983) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The cloning, DNA sequence, and overexpression of the gene araE coding for arabinose-proton symport in Escherichia coli K12."
    Maiden M.C.J., Jones-Mortimer M.C., Henderson P.J.F.
    J. Biol. Chem. 263:8003-8010(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12 / JM2433.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYGEA_ECOLI
AccessioniPrimary (citable) accession number: P03813
Secondary accession number(s): Q2M9Z7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: March 16, 2016
This is version 121 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.