Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Protein sigma-1-small

Gene

S1

Organism
Reovirus type 3 (strain Dearing) (T3D) (Mammalian orthoreovirus 3)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Host G2/M cell cycle arrest by virus, Host-virus interaction, Modulation of host cell cycle by virus

Names & Taxonomyi

Protein namesi
Recommended name:
Protein sigma-1-small
Short name:
Sigma1s
Alternative name(s):
Sigma-s
Sigma1NS
Sigma1bNS
p14
Gene namesi
Name:S1
OrganismiReovirus type 3 (strain Dearing) (T3D) (Mammalian orthoreovirus 3)
Taxonomic identifieri10886 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSpinareovirinaeOrthoreovirus
Virus hostiMammalia [TaxID: 40674]

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002227551 – 120Protein sigma-1-smallAdd BLAST120

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR003478. Capsid_sigma_1s.
[Graphical view]
PfamiPF02454. Sigma_1s. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P03529-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEYHCQKGLN QGSRRSRRRL KYTLILSSGS PRDSMMQTNE SSLLSKVGMT
60 70 80 90 100
WLHQSVMLNL QSPDWKALSE PSKQLSMDLI RVLPSWVLEW DNLRQDLQSY
110 120
ALITTISLRE WILQNVTLDH
Length:120
Mass (Da):14,017
Last modified:July 21, 1986 - v1
Checksum:iAC152A19E80E47E4
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti3Y → H in CAA25606 (PubMed:6095208).Curated1
Sequence conflicti99S → T in CAA25606 (PubMed:6095208).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X01161 Genomic RNA. Translation: CAA25606.1.
PIRiA04128. QQXRS3.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X01161 Genomic RNA. Translation: CAA25606.1.
PIRiA04128. QQXRS3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR003478. Capsid_sigma_1s.
[Graphical view]
PfamiPF02454. Sigma_1s. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSIG1S_REOVD
AccessioniPrimary (citable) accession number: P03529
Secondary accession number(s): Q85669
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: October 1, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.