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P03529 (SIG1S_REOVD) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Protein sigma-1-small

Short name=Sigma1s
Alternative name(s):
Sigma-s
Sigma1NS
Sigma1bNS
p14
Gene names
Name:S1
OrganismReovirus type 3 (strain Dearing) (T3D) (Mammalian orthoreovirus 3)
Taxonomic identifier10886 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSpinareovirinaeOrthoreovirus
Virus hostMammalia [TaxID: 40674]

Protein attributes

Sequence length120 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the orthoreovirus sigma-1s protein family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 120120Protein sigma-1-small
PRO_0000222755

Experimental info

Sequence conflict31Y → H in CAA25606. Ref.2
Sequence conflict991S → T in CAA25606. Ref.2

Sequences

Sequence LengthMass (Da)Tools
P03529 [UniParc].

Last modified July 21, 1986. Version 1.
Checksum: AC152A19E80E47E4

FASTA12014,017
        10         20         30         40         50         60 
MEYHCQKGLN QGSRRSRRRL KYTLILSSGS PRDSMMQTNE SSLLSKVGMT WLHQSVMLNL 

        70         80         90        100        110        120 
QSPDWKALSE PSKQLSMDLI RVLPSWVLEW DNLRQDLQSY ALITTISLRE WILQNVTLDH 

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References

[1]"Sequence of reovirus haemagglutinin predicts a coiled-coil structure."
Bassel-Duby R., Jayasuriya A.K., Chatterjee D., Sonenberg N., Maizel J.V. Jr., Fields B.N.
Nature 315:421-423(1985) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
[2]"Molecular cloning and sequencing of the reovirus (serotype 3) S1 gene which encodes the viral cell attachment protein sigma 1."
Nagata L., Masri S.A., Mah D.C.W., Lee P.W.K.
Nucleic Acids Res. 12:8699-8710(1984) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X01161 Genomic RNA. Translation: CAA25606.1.
PIRQQXRS3. A04128.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR003478. Capsid_sigma_1s.
[Graphical view]
PfamPF02454. Sigma_1s. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSIG1S_REOVD
AccessionPrimary (citable) accession number: P03529
Secondary accession number(s): Q85669
Entry history
Integrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: April 3, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families