##gff-version 3 P03302 UniProtKB Initiator methionine 1 1 . . . Note=Removed%3B by host;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Chain 2 2206 . . . ID=PRO_0000426656;Note=Genome polyprotein P03302 UniProtKB Chain 2 878 . . . ID=PRO_0000426657;Note=P1 P03302 UniProtKB Chain 2 340 . . . ID=PRO_0000426658;Note=Capsid protein VP0 P03302 UniProtKB Chain 2 69 . . . ID=PRO_0000426659;Note=Capsid protein VP4 P03302 UniProtKB Chain 70 340 . . . ID=PRO_0000426660;Note=Capsid protein VP2 P03302 UniProtKB Chain 341 578 . . . ID=PRO_0000426661;Note=Capsid protein VP3 P03302 UniProtKB Chain 579 878 . . . ID=PRO_0000426662;Note=Capsid protein VP1 P03302 UniProtKB Chain 879 1453 . . . ID=PRO_0000426663;Note=P2 P03302 UniProtKB Chain 879 1027 . . . ID=PRO_0000426664;Note=Protease 2A P03302 UniProtKB Chain 1028 1124 . . . ID=PRO_0000040140;Note=Protein 2B P03302 UniProtKB Chain 1125 1453 . . . ID=PRO_0000040141;Note=Protein 2C P03302 UniProtKB Chain 1454 2206 . . . ID=PRO_0000426665;Note=P3 P03302 UniProtKB Chain 1454 1562 . . . ID=PRO_0000426666;Note=Protein 3AB P03302 UniProtKB Chain 1454 1540 . . . ID=PRO_0000040142;Note=Protein 3A P03302 UniProtKB Chain 1541 1562 . . . ID=PRO_0000426667;Note=Viral protein genome-linked P03302 UniProtKB Chain 1563 2206 . . . ID=PRO_0000426668;Note=Protein 3CD P03302 UniProtKB Chain 1563 1745 . . . ID=PRO_0000426669;Note=Protease 3C P03302 UniProtKB Chain 1746 2206 . . . ID=PRO_0000426670;Note=RNA-directed RNA polymerase P03302 UniProtKB Topological domain 2 1517 . . . Note=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255 P03302 UniProtKB Intramembrane 1518 1533 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255 P03302 UniProtKB Topological domain 1534 2206 . . . Note=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255 P03302 UniProtKB Domain 1229 1385 . . . Note=SF3 helicase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00551 P03302 UniProtKB Domain 1563 1741 . . . Note=Peptidase C3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 P03302 UniProtKB Domain 1972 2087 . . . Note=RdRp catalytic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00539 P03302 UniProtKB Zinc finger 1393 1410 . . . Note=C4-type;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Region 579 603 . . . Note=Amphipathic alpha-helix;Ontology_term=ECO:0000255;evidence=ECO:0000255 P03302 UniProtKB Region 579 599 . . . Note=Amphipathic alpha-helix;Ontology_term=ECO:0000255;evidence=ECO:0000255 P03302 UniProtKB Region 1125 1263 . . . Note=Oligomerization;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Region 1125 1197 . . . Note=Membrane-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Region 1146 1150 . . . Note=RNA-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Region 1437 1444 . . . Note=RNA-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Region 1448 1453 . . . Note=Oligomerization;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Active site 898 898 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Active site 916 916 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Active site 987 987 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Active site 1602 1602 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 P03302 UniProtKB Active site 1633 1633 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 P03302 UniProtKB Active site 1709 1709 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 P03302 UniProtKB Binding site 933 933 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 P03302 UniProtKB Binding site 935 935 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 P03302 UniProtKB Binding site 993 993 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 P03302 UniProtKB Binding site 995 995 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 P03302 UniProtKB Binding site 1253 1260 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00551 P03302 UniProtKB Binding site 1393 1393 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Binding site 1396 1396 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Binding site 1405 1405 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Binding site 1410 1410 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Binding site 1978 1978 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Binding site 1978 1978 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Binding site 2073 2073 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Binding site 2073 2073 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Site 69 70 . . . Note=Cleavage%3B by autolysis;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Site 340 341 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 P03302 UniProtKB Site 878 879 . . . Note=Cleavage%3B by autolysis;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 P03302 UniProtKB Site 1027 1028 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 P03302 UniProtKB Site 1124 1125 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 P03302 UniProtKB Site 1149 1149 . . . Note=Involved in the interaction with host RTN3;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q66478 P03302 UniProtKB Site 1453 1454 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 P03302 UniProtKB Site 1540 1541 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 P03302 UniProtKB Site 1562 1563 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 P03302 UniProtKB Site 1745 1746 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 P03302 UniProtKB Modified residue 1543 1543 . . . Note=O-(5'-phospho-RNA)-tyrosine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Lipidation 2 2 . . . Note=N-myristoyl glycine%3B by host;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 P03302 UniProtKB Natural variant 431 431 . . . Note=In strain: P3/Leon 12a[1]b. S->F P03302 UniProtKB Natural variant 864 864 . . . Note=In strain: P3/Leon 12a[1]b. K->R P03302 UniProtKB Natural variant 908 908 . . . Note=In strain: P3/Leon 12a[1]b. T->A P03302 UniProtKB Beta strand 4 8 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 25 29 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 33 35 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:8E8R P03302 UniProtKB Helix 36 38 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 51 54 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 57 59 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 83 87 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 90 96 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 103 105 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Turn 113 115 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 126 128 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 138 141 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 147 151 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 153 155 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 156 158 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:8E8X P03302 UniProtKB Helix 159 167 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 168 180 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 187 197 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 203 207 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 213 216 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 219 221 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 226 228 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 235 237 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:8E8R P03302 UniProtKB Helix 246 248 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Turn 249 252 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 255 260 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 261 267 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Turn 268 270 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 272 278 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 282 287 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Turn 289 291 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 295 307 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 314 331 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Turn 348 351 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 363 365 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 379 382 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 384 387 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Turn 399 403 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 405 408 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 410 413 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 422 427 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Turn 429 431 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Turn 433 437 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 439 444 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 447 452 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 454 460 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 469 475 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 477 479 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 485 488 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 491 497 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 499 501 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 503 508 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 513 520 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 523 525 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 529 536 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 542 544 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:8E8R P03302 UniProtKB Beta strand 546 556 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 561 565 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 618 621 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:8E8R P03302 UniProtKB Helix 623 625 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 633 635 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 649 651 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 653 657 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 661 671 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 675 677 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1VBB P03302 UniProtKB Beta strand 680 685 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 690 692 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Helix 693 698 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 701 718 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 730 736 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 744 748 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:8E8R P03302 UniProtKB Helix 749 752 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 754 756 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 758 762 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 768 772 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 777 783 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Turn 799 802 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 811 814 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:8E8R P03302 UniProtKB Beta strand 816 821 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 830 848 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC P03302 UniProtKB Beta strand 858 861 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1PVC