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Protein

Capsid vertex component 1

Gene

CVC1

Organism
Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Capsid vertex-specific component that plays a role during viral DNA encapsidation, assuring correct genome cleavage and presumably stabilizing capsids that contain full-length viral genomes.UniRule annotation

GO - Biological processi

Keywordsi

Biological processViral genome packaging, Viral release from host cell

Names & Taxonomyi

Protein namesi
Recommended name:
Capsid vertex component 1UniRule annotation
Gene namesi
Name:CVC1UniRule annotation
ORF Names:BGLF1
OrganismiEpstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4)
Taxonomic identifieri10377 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeGammaherpesvirinaeLymphocryptovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000153037 Componenti: Genome

Subcellular locationi

P03222:
  • Virion UniRule annotation
  • Host nucleus UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Capsid protein, Host nucleus, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001159641 – 507Capsid vertex component 1Add BLAST507

Expressioni

Keywords - Developmental stagei

Late protein

Interactioni

Subunit structurei

Interacts (via C-terminus) with capsid vertex component 2/CVC2.UniRule annotation

Protein-protein interaction databases

BioGridi971744. 1 interactor.

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi243 – 249Poly-Gly7

Sequence similaritiesi

Belongs to the herpesviridae CVC1 protein family.UniRule annotation

Phylogenomic databases

OrthoDBiVOG0900008I.

Family and domain databases

HAMAPiMF_04017. HSV_CVC1. 1 hit.
InterProiView protein in InterPro
IPR007640. UL17-like.
PfamiView protein in Pfam
PF04559. Herpes_UL17. 1 hit.

Sequencei

Sequence statusi: Complete.

P03222-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDVHIDNQVL SGLGTPLLVH LFVPDTVMAE LCPNRVPNCE GAWCQTLFSD
60 70 80 90 100
RTGLTRVCRV FAARGMLPGR PSHRGTFTSV PVYCDEGLPE LYNPFHVAAL
110 120 130 140 150
RFYDEGGLVG ELQIYYLSLF EGAKRALTDG HLIREASGVQ ESAAAMQPIP
160 170 180 190 200
IDPGPPGGAG IEHMPVAAAQ VEHPKTYDLK QILLEITQEE NRGEQRLGHA
210 220 230 240 250
GSPALCLGLR LRAGAETKAA AETSVSKHHP ALENPSNIRG SAGGEGGGGR
260 270 280 290 300
AGTGGTVGVG SGALSRVPVS FSKTRRAIRE SRALVRGIAH IFSPHALYVV
310 320 330 340 350
TYPELSAQGR LHRMTAVTHA SPATDLAEVS ILGAPEREFR FLISVALRIS
360 370 380 390 400
ASFREKLAMQ AWTAQQEIPV VIPTSYSRIY KNSDLIREAF FTVQTRVSWE
410 420 430 440 450
SCWVKATISN APKTPDACLW IDSHPLYEEG ASAWGKVIDS RPPGGLVGAA
460 470 480 490 500
SQLVALGTDG HCVHLATTSD GQAFLVLPGG FVIKGQLALT PEERGYILAR

HGIRREQ
Length:507
Mass (Da):54,462
Last modified:July 21, 1986 - v1
Checksum:i59605D622EF6FC91
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
V01555 Genomic DNA. Translation: CAA24832.1.
AJ507799 Genomic DNA. Translation: CAD53442.1.
PIRiD43044. QQBE41.
RefSeqiYP_401692.1. NC_007605.1.

Genome annotation databases

GeneIDi3783702.
KEGGivg:3783702.

Similar proteinsi

Entry informationi

Entry nameiCVC1_EBVB9
AccessioniPrimary (citable) accession number: P03222
Secondary accession number(s): Q777C7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: October 25, 2017
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families