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Protein

Acetylcholine receptor subunit alpha

Gene

CHRNA1

Organism
Tetronarce californica (Pacific electric ray) (Torpedo californica)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.

GO - Molecular functioni

Keywordsi

Molecular functionIon channel, Ligand-gated ion channel, Receptor
Biological processIon transport, Transport

Protein family/group databases

TCDBi1.A.9.1.9. the neurotransmitter receptor, cys loop, ligand-gated ion channel (lic) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Acetylcholine receptor subunit alpha
Gene namesi
Name:CHRNA1
OrganismiTetronarce californica (Pacific electric ray) (Torpedo californica)
Taxonomic identifieri7787 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataChondrichthyesElasmobranchiiBatoideaTorpediniformesTorpedinidaeTetronarce

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini25 – 234ExtracellularAdd BLAST210
Transmembranei235 – 259HelicalAdd BLAST25
Transmembranei267 – 285HelicalAdd BLAST19
Transmembranei301 – 320HelicalAdd BLAST20
Topological domaini321 – 432CytoplasmicAdd BLAST112
Transmembranei433 – 451HelicalAdd BLAST19

GO - Cellular componenti

Keywords - Cellular componenti

Cell junction, Cell membrane, Membrane, Postsynaptic cell membrane, Synapse

Pathology & Biotechi

Chemistry databases

ChEMBLiCHEMBL3097.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 241 PublicationAdd BLAST24
ChainiPRO_000000031025 – 461Acetylcholine receptor subunit alphaAdd BLAST437

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi152 ↔ 166
Glycosylationi165N-linked (GlcNAc...)2 Publications1
Disulfide bondi216 ↔ 217Associated with receptor activation

Keywords - PTMi

Disulfide bond, Glycoprotein

PTM databases

SwissPalmiP02710.
UniCarbKBiP02710.

Interactioni

Subunit structurei

Pentamer of two alpha chains, and one each of the beta, delta, and gamma chains.

Protein-protein interaction databases

IntActiP02710. 3 interactors.

Chemistry databases

BindingDBiP02710.

Structurei

Secondary structure

1461
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Turni93 – 99Combined sources7
Beta strandi214 – 218Combined sources5
Beta strandi262 – 264Combined sources3
Helixi265 – 287Combined sources23
Turni288 – 290Combined sources3
Helixi304 – 306Combined sources3
Helixi307 – 323Combined sources17

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1ABTNMR-B209-220[»]
1DXZNMR-A260-291[»]
1IDGNMR-B205-222[»]
1IDHNMR-B205-222[»]
1LK1model-A/E26-235[»]
1LXGNMR-B205-222[»]
1LXHNMR-B205-222[»]
1OLKmodel-A/C27-235[»]
1TORNMR-A91-100[»]
1TOSNMR-A91-99[»]
3MRANMR-A301-325[»]
ProteinModelPortaliP02710.
SMRiP02710.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP02710.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

HOVERGENiHBG003756.

Family and domain databases

Gene3Di2.70.170.10. 1 hit.
InterProiView protein in InterPro
IPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
IPR018000. Neurotransmitter_ion_chnl_CS.
IPR002394. Nicotinic_acetylcholine_rcpt.
PANTHERiPTHR18945. PTHR18945. 1 hit.
PfamiView protein in Pfam
PF02931. Neur_chan_LBD. 1 hit.
PF02932. Neur_chan_memb. 2 hits.
PRINTSiPR00254. NICOTINICR.
PR00252. NRIONCHANNEL.
SUPFAMiSSF63712. SSF63712. 1 hit.
SSF90112. SSF90112. 1 hit.
TIGRFAMsiTIGR00860. LIC. 1 hit.
PROSITEiView protein in PROSITE
PS00236. NEUROTR_ION_CHANNEL. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P02710-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MILCSYWHVG LVLLLFSCCG LVLGSEHETR LVANLLENYN KVIRPVEHHT
60 70 80 90 100
HFVDITVGLQ LIQLISVDEV NQIVETNVRL RQQWIDVRLR WNPADYGGIK
110 120 130 140 150
KIRLPSDDVW LPDLVLYNNA DGDFAIVHMT KLLLDYTGKI MWTPPAIFKS
160 170 180 190 200
YCEIIVTHFP FDQQNCTMKL GIWTYDGTKV SISPESDRPD LSTFMESGEW
210 220 230 240 250
VMKDYRGWKH WVYYTCCPDT PYLDITYHFI MQRIPLYFVV NVIIPCLLFS
260 270 280 290 300
FLTGLVFYLP TDSGEKMTLS ISVLLSLTVF LLVIVELIPS TSSAVPLIGK
310 320 330 340 350
YMLFTMIFVI SSIIITVVVI NTHHRSPSTH TMPQWVRKIF IDTIPNVMFF
360 370 380 390 400
STMKRASKEK QENKIFADDI DISDISGKQV TGEVIFQTPL IKNPDVKSAI
410 420 430 440 450
EGVKYIAEHM KSDEESSNAA EEWKYVAMVI DHILLCVFML ICIIGTVSVF
460
AGRLIELSQE G
Length:461
Mass (Da):52,741
Last modified:July 21, 1986 - v1
Checksum:i398C86C9309AF0D8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J00963 mRNA. Translation: AAA96705.1.
PIRiA03170. ACRYA1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J00963 mRNA. Translation: AAA96705.1.
PIRiA03170. ACRYA1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1ABTNMR-B209-220[»]
1DXZNMR-A260-291[»]
1IDGNMR-B205-222[»]
1IDHNMR-B205-222[»]
1LK1model-A/E26-235[»]
1LXGNMR-B205-222[»]
1LXHNMR-B205-222[»]
1OLKmodel-A/C27-235[»]
1TORNMR-A91-100[»]
1TOSNMR-A91-99[»]
3MRANMR-A301-325[»]
ProteinModelPortaliP02710.
SMRiP02710.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP02710. 3 interactors.

Chemistry databases

BindingDBiP02710.
ChEMBLiCHEMBL3097.

Protein family/group databases

TCDBi1.A.9.1.9. the neurotransmitter receptor, cys loop, ligand-gated ion channel (lic) family.

PTM databases

SwissPalmiP02710.
UniCarbKBiP02710.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG003756.

Miscellaneous databases

EvolutionaryTraceiP02710.

Family and domain databases

Gene3Di2.70.170.10. 1 hit.
InterProiView protein in InterPro
IPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
IPR018000. Neurotransmitter_ion_chnl_CS.
IPR002394. Nicotinic_acetylcholine_rcpt.
PANTHERiPTHR18945. PTHR18945. 1 hit.
PfamiView protein in Pfam
PF02931. Neur_chan_LBD. 1 hit.
PF02932. Neur_chan_memb. 2 hits.
PRINTSiPR00254. NICOTINICR.
PR00252. NRIONCHANNEL.
SUPFAMiSSF63712. SSF63712. 1 hit.
SSF90112. SSF90112. 1 hit.
TIGRFAMsiTIGR00860. LIC. 1 hit.
PROSITEiView protein in PROSITE
PS00236. NEUROTR_ION_CHANNEL. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiACHA_TETCF
AccessioniPrimary (citable) accession number: P02710
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: April 12, 2017
This is version 127 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.