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Protein

30S ribosomal protein S5

Gene

rpsE

Organism
Geobacillus stearothermophilus (Bacillus stearothermophilus)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

With S4 and S12 plays an important role in translational accuracy.By similarity
Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding
Biological processAntibiotic resistance

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S5
Short name:
BS5
Alternative name(s):
BS6
Gene namesi
Name:rpsE
OrganismiGeobacillus stearothermophilus (Bacillus stearothermophilus)
Taxonomic identifieri1422 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001314691 – 16630S ribosomal protein S5Add BLAST166

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S4 and S8 (By similarity).By similarity

Protein-protein interaction databases

MINTiP02357

Structurei

Secondary structure

1166
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi6 – 8Combined sources3
Beta strandi12 – 19Combined sources8
Beta strandi21 – 24Combined sources4
Beta strandi33 – 40Combined sources8
Beta strandi42 – 55Combined sources14
Helixi56 – 67Combined sources12
Beta strandi85 – 89Combined sources5
Beta strandi92 – 98Combined sources7
Beta strandi105 – 107Combined sources3
Helixi109 – 118Combined sources10
Beta strandi122 – 127Combined sources6
Helixi133 – 146Combined sources14

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1DV4X-ray4.50E4-148[»]
1PKPX-ray2.80A1-150[»]
ProteinModelPortaliP02357
SMRiP02357
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP02357

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 74S5 DRBMAdd BLAST64

Domaini

The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.

Sequence similaritiesi

Family and domain databases

Gene3Di3.30.230.10, 1 hit
HAMAPiMF_01307_B Ribosomal_S5_B, 1 hit
InterProiView protein in InterPro
IPR000851 Ribosomal_S5
IPR005712 Ribosomal_S5_bac-type
IPR005324 Ribosomal_S5_C
IPR020568 Ribosomal_S5_D2-typ_fold
IPR014721 Ribosomal_S5_D2-typ_fold_subgr
IPR013810 Ribosomal_S5_N
IPR018192 Ribosomal_S5_N_CS
PANTHERiPTHR13718 PTHR13718, 1 hit
PfamiView protein in Pfam
PF00333 Ribosomal_S5, 1 hit
PF03719 Ribosomal_S5_C, 1 hit
SUPFAMiSSF54211 SSF54211, 1 hit
TIGRFAMsiTIGR01021 rpsE_bact, 1 hit
PROSITEiView protein in PROSITE
PS00585 RIBOSOMAL_S5, 1 hit
PS50881 S5_DSRBD, 1 hit

Sequencei

Sequence statusi: Complete.

P02357-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRINPNKLE LEERVVAVNR VAKVVKGGRR LRFSALVVVG DKNGHVGFGT
60 70 80 90 100
GKAQEVPEAI RKAIEDAKKN LIEVPIVGTT IPHEVIGHFG AGEIILKPAS
110 120 130 140 150
EGTGVIAGGP ARAVLELAGI SDILSKSIGS NTPINMVRAT FDGLKQLKRA
160
EDVAKLRGKT VEELLG
Length:166
Mass (Da):17,628
Last modified:July 21, 1986 - v1
Checksum:i774E82A2ED1D8EC5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M57621 Genomic DNA Translation: AAA22699.1
PIRiA02708 R3BS5F
RefSeqiWP_033017242.1, NZ_LUCR01000210.1

Similar proteinsi

Entry informationi

Entry nameiRS5_GEOSE
AccessioniPrimary (citable) accession number: P02357
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: May 23, 2018
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing

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